Works matching IS 1553734X AND DT 2017 AND VI 13 AND IP 12

Results: 43

Firing rate equations require a spike synchrony mechanism to correctly describe fast oscillations in inhibitory networks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005881

By:

Devalle, Federico;
Roxin, Alex;
Montbrió, Ernest

Publication type:

Article

Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005875

By:

Li, Ye Henry;
Li, Dangna;
Samusik, Nikolay;
Wang, Xiaowei;
Guan, Leying;
Nolan, Garry P.;
Wong, Wing Hung

Publication type:

Article

MPLasso: Inferring microbial association networks using prior microbial knowledge.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005915

By:

Lo, Chieh;
Marculescu, Radu

Publication type:

Article

System identification of signaling dependent gene expression with different time-scale data.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005913

By:

Tsuchiya, Takaho;
Fujii, Masashi;
Matsuda, Naoki;
Kunida, Katsuyuki;
Uda, Shinsuke;
Kubota, Hiroyuki;
Konishi, Katsumi;
Kuroda, Shinya

Publication type:

Article

High-resolution global peptide-protein docking using fragments-based PIPER-FlexPepDock.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005905

By:

Alam, Nawsad;
Goldstein, Oriel;
Xia, Bing;
Porter, Kathryn A.;
Kozakov, Dima;
Schueler-Furman, Ora

Publication type:

Article

Local motion adaptation enhances the representation of spatial structure at EMD arrays.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005919

By:

Li, Jinglin;
Lindemann, Jens;
Egelhaaf, Martin

Publication type:

Article

Correction: Dynamic Maternal Gradients Control Timing and Shift-Rates for Drosophila Gap Gene Expression.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

Theoretical perspectives on central chemosensitivity: CO<sub>2</sub>/H<sup>+</sup>-sensitive neurons in the locus coeruleus.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005853

By:

Quintero, Maria C.;
Putnam, Robert W.;
Cordovez, Juan M.

Publication type:

Article

Physiological models of the lateral superior olive.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005903

By:

Ashida, Go;
Tollin, Daniel J.;
Kretzberg, Jutta

Publication type:

Article

Mechanistic modeling quantifies the influence of tumor growth kinetics on the response to anti-angiogenic treatment.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005874

By:

Gaddy, Thomas D.;
Wu, Qianhui;
Arnheim, Alyssa D.;
Finley, Stacey D.

Publication type:

Article

Ten simple rules for writing a career development award proposal.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005863

By:

Botham, Crystal M.;
Arribere, Joshua A.;
Brubaker, Sky W.;
Beier, Kevin T.

Publication type:

Article

Novel linear motif filtering protocol reveals the role of the LC8 dynein light chain in the Hippo pathway.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005885

By:

Erdős, Gábor;
Szaniszló, Tamás;
Pajkos, Mátyás;
Hajdu-Soltész, Borbála;
Kiss, Bence;
Pál, Gábor;
Nyitray, László;
Dosztányi, Zsuzsanna

Publication type:

Article

Thalamocortical control of propofol phase-amplitude coupling.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005879

By:

Soplata, Austin E.;
McCarthy, Michelle M.;
Sherfey, Jason;
Lee, Shane;
Purdon, Patrick L.;
Brown, Emery N.;
Kopell, Nancy

Publication type:

Article

Molecular recognition and packing frustration in a helical protein.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005909

By:

Huynh, Loan;
Neale, Chris;
Pomès, Régis;
Chan, Hue Sun

Publication type:

Article

Correction: Reading wild minds: A computational assay of Theory of Mind sophistication across seven primate species.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

Complete hazard ranking to analyze right-censored data: An ALS survival study.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005887

By:

Huang, Zhengnan;
Zhang, Hongjiu;
Boss, Jonathan;
Goutman, Stephen A.;
Mukherjee, Bhramar;
Dinov, Ivo D.;
Guan, Yuanfang;
null, null

Publication type:

Article

Filament turnover tunes both force generation and dissipation to control long-range flows in a model actomyosin cortex.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005811

By:

McFadden, William M.;
McCall, Patrick M.;
Gardel, Margaret L.;
Munro, Edwin M.

Publication type:

Article

An error-tuned model for sensorimotor learning.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005883

By:

Ingram, James N.;
Sadeghi, Mohsen;
Flanagan, J. Randall;
Wolpert, Daniel M.

Publication type:

Article

LRSSLMDA: Laplacian Regularized Sparse Subspace Learning for MiRNA-Disease Association prediction.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005912

By:

Chen, Xing;
Huang, Li

Publication type:

Article

Optimal number of spacers in CRISPR arrays.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005891

By:

Martynov, Alexander;
Severinov, Konstantin;
Ispolatov, Iaroslav

Publication type:

Article

Invariant recognition drives neural representations of action sequences.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005859

By:

Tacchetti, Andrea;
Isik, Leyla;
Poggio, Tomaso

Publication type:

Article

Costs of task allocation with local feedback: Effects of colony size and extra workers in social insects and other multi-agent systems.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005904

By:

Radeva, Tsvetomira;
Dornhaus, Anna;
Lynch, Nancy;
Nagpal, Radhika;
Su, Hsin-Hao

Publication type:

Article

Optimal occlusion uniformly partitions red blood cells fluxes within a microvascular network.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005892

By:

Chang, Shyr-Shea;
Tu, Shenyinying;
Baek, Kyung In;
Pietersen, Andrew;
Liu, Yu-Hsiu;
Savage, Van M.;
Hwang, Sheng-Ping L.;
Hsiai, Tzung K.;
Roper, Marcus

Publication type:

Article

MAGPIE: Simplifying access and execution of computational models in the life sciences.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005898

By:

Baldow, Christoph;
Salentin, Sebastian;
Schroeder, Michael;
Roeder, Ingo;
Glauche, Ingmar

Publication type:

Article

A master equation approach to actin polymerization applied to endocytosis in yeast.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005901

By:

Wang, Xinxin;
Carlsson, Anders E.

Publication type:

Article

Feature reliability determines specificity and transfer of perceptual learning in orientation search.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005882

By:

Yashar, Amit;
Denison, Rachel N.

Publication type:

Article

Correction: Sequential inference as a mode of cognition and its correlates in fronto-parietal and hippocampal brain regions.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

Correction: Identifying influential neighbors in animal flocking.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

Stabilizing patterns in time: Neural network approach.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005861

By:

Ben-Shushan, Nadav;
Tsodyks, Misha

Publication type:

Article

Specific excitatory connectivity for feature integration in mouse primary visual cortex.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005888

By:

Muir, Dylan R.;
Molina-Luna, Patricia;
Roth, Morgane M.;
Helmchen, Fritjof;
Kampa, Björn M.

Publication type:

Article

Non-linear auto-regressive models for cross-frequency coupling in neural time series.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005893

By:

Dupré la Tour, Tom;
Tallot, Lucille;
Grabot, Laetitia;
Doyère, Valérie;
van Wassenhove, Virginie;
Grenier, Yves;
Gramfort, Alexandre

Publication type:

Article

Predicting the pathogenicity of novel variants in mitochondrial tRNA with MitoTIP.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005867

By:

Sonney, Sanjay;
Leipzig, Jeremy;
Lott, Marie T.;
Zhang, Shiping;
Procaccio, Vincent;
Wallace, Douglas C.;
Sondheimer, Neal

Publication type:

Article

A cyber-linked undergraduate research experience in computational biomolecular structure prediction and design.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005837

By:

Alford, Rebecca F.;
Leaver-Fay, Andrew;
Gonzales, Lynda;
Dolan, Erin L.;
Gray, Jeffrey J.

Publication type:

Article

Automated classification of dolphin echolocation click types from the Gulf of Mexico.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005823

By:

Frasier, Kaitlin E.;
Roch, Marie A.;
Soldevilla, Melissa S.;
Wiggins, Sean M.;
Garrison, Lance P.;
Hildebrand, John A.

Publication type:

Article

Ten simple rules for international short-term research stays.

Published in:

2017

By:

Forero, Diego A.;
Lopez-Leon, Sandra;
Patrinos, George P.

Publication type:

Editorial

Metabomatching: Using genetic association to identify metabolites in proton NMR spectroscopy.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005839

By:

Rueedi, Rico;
Mallol, Roger;
Raffler, Johannes;
Lamparter, David;
Friedrich, Nele;
Vollenweider, Peter;
Waeber, Gérard;
Kastenmüller, Gabi;
Kutalik, Zoltán;
Bergmann, Sven

Publication type:

Article

Sequence-dependent nucleosome sliding in rotation-coupled and uncoupled modes revealed by molecular simulations.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005880

By:

Niina, Toru;
Brandani, Giovanni B.;
Tan, Cheng;
Takada, Shoji

Publication type:

Article

Correction: Signatures of criticality arise from random subsampling in simple population models.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

Olfactory coding in the turbulent realm.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005870

By:

Jacob, Vincent;
Monsempès, Christelle;
Rospars, Jean-Pierre;
Masson, Jean-Baptiste;
Lucas, Philippe

Publication type:

Article

Genetic drift and selection in many-allele range expansions.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005866

By:

Weinstein, Bryan T.;
Lavrentovich, Maxim O.;
Möbius, Wolfram;
Murray, Andrew W.;
Nelson, David R.

Publication type:

Article

A model of the onset of the senescence associated secretory phenotype after DNA damage induced senescence.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005741

By:

Meyer, Patrick;
Maity, Pallab;
Burkovski, Andre;
Schwab, Julian;
Müssel, Christoph;
Singh, Karmveer;
Ferreira, Filipa F.;
Krug, Linda;
Maier, Harald J.;
Wlaschek, Meinhard;
Wirth, Thomas;
Kestler, Hans A.;
Scharffetter-Kochanek, Karin

Publication type:

Article

pSSAlib: The partial-propensity stochastic chemical network simulator.

Published in:

2017

By:

Ostrenko, Oleksandr;
Incardona, Pietro;
Ramaswamy, Rajesh;
Brusch, Lutz;
Sbalzarini, Ivo F.

Publication type:

Diary

Efficient encoding of motion is mediated by gap junctions in the fly visual system.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005846

By:

Wang, Siwei;
Borst, Alexander;
Zaslavsky, Noga;
Tishby, Naftali;
Segev, Idan

Publication type:

Article