Works matching IS 1553734X AND DT 2017 AND VI 13 AND IP 11

Results: 44

The effect of spatial randomness on the average fixation time of mutants.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005864

By:

Farhang-Sardroodi, Suzan;
Darooneh, Amirhossein H.;
Nikbakht, Moladad;
Komarova, Natalia L.;
Kohandel, Mohammad

Publication type:

Article

A network diffusion approach to inferring sample-specific function reveals functional changes associated with breast cancer.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005793

By:

Patkar, Sushant;
Magen, Assaf;
Sharan, Roded;
Hannenhalli, Sridhar

Publication type:

Article

Dynamical compensation and structural identifiability of biological models: Analysis, implications, and reconciliation.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005878

By:

Villaverde, Alejandro F.;
Banga, Julio R.

Publication type:

Article

Strawberry: Fast and accurate genome-guided transcript reconstruction and quantification from RNA-Seq.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005851

By:

Liu, Ruolin;
Dickerson, Julie

Publication type:

Article

Initial-state-dependent, robust, transient neural dynamics encode conscious visual perception.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005806

By:

Baria, Alexis T.;
Maniscalco, Brian;
He, Biyu J.

Publication type:

Article

Fragmentation modes and the evolution of life cycles.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005860

By:

Pichugin, Yuriy;
Peña, Jorge;
Rainey, Paul B.;
Traulsen, Arne

Publication type:

Article

Identifying influential neighbors in animal flocking.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005822

By:

Jiang, Li;
Giuggioli, Luca;
Perna, Andrea;
Escobedo, Ramón;
Lecheval, Valentin;
Sire, Clément;
Han, Zhangang;
Theraulaz, Guy

Publication type:

Article

Choose, rate or squeeze: Comparison of economic value functions elicited by different behavioral tasks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005848

By:

Lopez-Persem, Alizée;
Rigoux, Lionel;
Bourgeois-Gironde, Sacha;
Daunizeau, Jean;
Pessiglione, Mathias

Publication type:

Article

Tracking urban human activity from mobile phone calling patterns.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005824

By:

Monsivais, Daniel;
Ghosh, Asim;
Bhattacharya, Kunal;
Dunbar, Robin I. M.;
Kaski, Kimmo

Publication type:

Article

A hierarchical stochastic model for bistable perception.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005856

By:

Albert, Stefan;
Schmack, Katharina;
Sterzer, Philipp;
Schneider, Gaby

Publication type:

Article

An efficient moments-based inference method for within-host bacterial infection dynamics.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005841

By:

Price, David J.;
Breuzé, Alexandre;
Dybowski, Richard;
Mastroeni, Piero;
Restif, Olivier

Publication type:

Article

fluEvidenceSynthesis: An R package for evidence synthesis based analysis of epidemiological outbreaks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005838

By:

van Leeuwen, Edwin;
Klepac, Petra;
Thorrington, Dominic;
Pebody, Richard;
Baguelin, Marc

Publication type:

Article

Optimal synaptic signaling connectome for locomotory behavior in Caenorhabditis elegans: Design minimizing energy cost.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005834

By:

Rakowski, Franciszek;
Karbowski, Jan

Publication type:

Article

Multivariate pattern dependence.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005799

By:

Anzellotti, Stefano;
Caramazza, Alfonso;
Saxe, Rebecca

Publication type:

Article

The role of Allee effect in modelling post resection recurrence of glioblastoma.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005818

By:

Neufeld, Zoltan;
von Witt, William;
Lakatos, Dora;
Wang, Jiaming;
Hegedus, Balazs;
Czirok, Andras

Publication type:

Article

Cell cycle time series gene expression data encoded as cyclic attractors in Hopfield systems.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005849

By:

Szedlak, Anthony;
Sims, Spencer;
Smith, Nicholas;
Paternostro, Giovanni;
Piermarocchi, Carlo

Publication type:

Article

Trade-off and flexibility in the dynamic regulation of the cullin-RING ubiquitin ligase repertoire.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005869

By:

Straube, Ronny;
Shah, Meera;
Flockerzi, Dietrich;
Wolf, Dieter A.

Publication type:

Article

The use of ambient humidity conditions to improve influenza forecast.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005844

By:

Shaman, Jeffrey;
Kandula, Sasikiran;
Yang, Wan;
Karspeck, Alicia

Publication type:

Article

Estimating the probabilities of rare arrhythmic events in multiscale computational models of cardiac cells and tissue.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005783

By:

Walker, Mark A.;
Gurev, Viatcheslav;
Rice, John J.;
Greenstein, Joseph L.;
Winslow, Raimond L.

Publication type:

Article

Correction: A Unifying Probabilistic View of Associative Learning.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

A Bayesian method for detecting pairwise associations in compositional data.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005852

By:

Schwager, Emma;
Mallick, Himel;
Ventz, Steffen;
Huttenhower, Curtis

Publication type:

Article

A coupled-oscillator model of olfactory bulb gamma oscillations.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005760

By:

Li, Guoshi;
Cleland, Thomas A.

Publication type:

Article

A free-boundary model of a motile cell explains turning behavior.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005862

By:

Nickaeen, Masoud;
Novak, Igor L.;
Pulford, Stephanie;
Rumack, Aaron;
Brandon, Jamie;
Slepchenko, Boris M.;
Mogilner, Alex

Publication type:

Article

A model-based clustering method to detect infectious disease transmission outbreaks from sequence variation.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005868

By:

McCloskey, Rosemary M.;
Poon, Art F. Y.

Publication type:

Article

Characterizing steady states of genome-scale metabolic networks in continuous cell cultures.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005835

By:

Fernandez-de-Cossio-Diaz, Jorge;
Leon, Kalet;
Mulet, Roberto

Publication type:

Article

Correction: Unmet needs for analyzing biological big data: A survey of 704 NSF principal investigators.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

Electrical stimulus artifact cancellation and neural spike detection on large multi-electrode arrays.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005842

By:

Mena, Gonzalo E.;
Grosberg, Lauren E.;
Madugula, Sasidhar;
Hottowy, Paweł;
Litke, Alan;
Cunningham, John;
Chichilnisky, E. J.;
Paninski, Liam

Publication type:

Article

Predictive model identifies key network regulators of cardiomyocyte mechano-signaling.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005854

By:

Tan, Philip M.;
Buchholz, Kyle S.;
Omens, Jeffrey H.;
McCulloch, Andrew D.;
Saucerman, Jeffrey J.

Publication type:

Article

Automated visualization of rule-based models.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005857

By:

Sekar, John Arul Prakash;
Tapia, Jose-Juan;
Faeder, James R.

Publication type:

Article

Improving virtual screening of G protein-coupled receptors via ligand-directed modeling.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005819

By:

Coudrat, Thomas;
Simms, John;
Christopoulos, Arthur;
Wootten, Denise;
Sexton, Patrick M.

Publication type:

Article

Significant associations between driver gene mutations and DNA methylation alterations across many cancer types.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005840

By:

Chen, Yun-Ching;
Gotea, Valer;
Margolin, Gennady;
Elnitski, Laura

Publication type:

Article

Correction: Error-Robust Modes of the Retinal Population Code.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

Are there physicochemical differences between allosteric and competitive ligands?

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005813

By:

Smith, Richard D.;
Lu, Jing;
Carlson, Heather A.

Publication type:

Article

Correction: Ten simple rules for structuring papers.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

A modeling study of budding yeast colony formation and its relationship to budding pattern and aging.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005843

By:

Wang, Yanli;
Lo, Wing-Cheong;
Chou, Ching-Shan

Publication type:

Article

Metabolic dynamics restricted by conserved carriers: Jamming and feedback.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005847

By:

Hatakeyama, Tetsuhiro S.;
Furusawa, Chikara

Publication type:

Article

Reading wild minds: A computational assay of Theory of Mind sophistication across seven primate species.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005833

By:

Devaine, Marie;
San-Galli, Aurore;
Trapanese, Cinzia;
Bardino, Giulia;
Hano, Christelle;
Saint Jalme, Michel;
Bouret, Sebastien;
Masi, Shelly;
Daunizeau, Jean

Publication type:

Article

Competitive tuning: Competition's role in setting the frequency-dependence of Ca<sup>2+</sup>-dependent proteins.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005820

By:

Romano, Daniel R.;
Pharris, Matthew C.;
Patel, Neal M.;
Kinzer-Ursem, Tamara L.

Publication type:

Article

Base pair probability estimates improve the prediction accuracy of RNA non-canonical base pairs.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005827

By:

Sloma, Michael F.;
Mathews, David H.

Publication type:

Article

Individual versus superensemble forecasts of seasonal influenza outbreaks in the United States.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005801

By:

Yamana, Teresa K.;
Kandula, Sasikiran;
Shaman, Jeffrey

Publication type:

Article

Insight into glucocorticoid receptor signalling through interactome model analysis.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005825

By:

Bakker, Emyr;
Tian, Kun;
Mutti, Luciano;
Demonacos, Constantinos;
Schwartz, Jean-Marc;
Krstic-Demonacos, Marija

Publication type:

Article

Allosteric modulation of cardiac myosin dynamics by omecamtiv mecarbil.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005826

By:

Hashem, Shaima;
Tiberti, Matteo;
Fornili, Arianna

Publication type:

Article

mixOmics: An R package for ‘omics feature selection and multiple data integration.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005752

By:

Rohart, Florian;
Gautier, Benoît;
Singh, Amrit;
Lê Cao, Kim-Anh

Publication type:

Article

A Rescorla-Wagner drift-diffusion model of conditioning and timing.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005796

By:

Luzardo, André;
Alonso, Eduardo;
Mondragón, Esther

Publication type:

Article