Works matching IS 1553734X AND DT 2017 AND VI 13 AND IP 1

Results: 71

Binding of DNA-bending non-histone proteins destabilizes regular 30-nm chromatin structure.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005365

By:

Bajpai, Gaurav;
Jain, Ishutesh;
Inamdar, Mandar M.;
Das, Dibyendu;
Padinhateeri, Ranjith

Publication type:

Article

Use of chiral cell shape to ensure highly directional swimming in trypanosomes.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005353

By:

Wheeler, Richard John

Publication type:

Article

An Asymmetrically Balanced Organization of Kinases versus Phosphatases across Eukaryotes Determines Their Distinct Impacts.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005221

By:

Smoly, Ilan;
Shemesh, Netta;
Ziv-Ukelson, Michal;
Ben-Zvi, Anat;
Yeger-Lotem, Esti

Publication type:

Article

Cell Sorting and Noise-Induced Cell Plasticity Coordinate to Sharpen Boundaries between Gene Expression Domains.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005307

By:

Wang, Qixuan;
Holmes, William R.;
Sosnik, Julian;
Schilling, Thomas;
Nie, Qing

Publication type:

Article

The missing link: Predicting connectomes from noisy and partially observed tract tracing data.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005374

By:

Hinne, Max;
Meijers, Annet;
Bakker, Rembrandt;
Tiesinga, Paul H. E.;
Mørup, Morten;
van Gerven, Marcel A. J.

Publication type:

Article

Self-organised criticality in the evolution of a thermodynamic model of rodent thermoregulatory huddling.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005378

By:

Wilson, Stuart P.

Publication type:

Article

Exploring the inhibitory effect of membrane tension on cell polarization.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005354

By:

Wang, Weikang;
Tao, Kuan;
Wang, Jing;
Yang, Gen;
Ouyang, Qi;
Wang, Yugang;
Zhang, Lei;
Liu, Feng

Publication type:

Article

Coevolutionary dynamics of phenotypic diversity and contingent cooperation.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005363

By:

Wu, Te;
Wang, Long;
Fu, Feng

Publication type:

Article

Iterative sure independence screening EM-Bayesian LASSO algorithm for multi-locus genome-wide association studies.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005357

By:

Tamba, Cox Lwaka;
Ni, Yuan-Li;
Zhang, Yuan-Ming

Publication type:

Article

Memory replay in balanced recurrent networks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005359

By:

Chenkov, Nikolay;
Sprekeler, Henning;
Kempter, Richard

Publication type:

Article

Effect of mutation mechanisms on variant composition and distribution in Caenorhabditis elegans.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005369

By:

Hwang, Ho-Yon;
Wang, Jiou

Publication type:

Article

Optimal Sequential Immunization Can Focus Antibody Responses against Diversity Loss and Distraction.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005336

By:

Wang, Shenshen

Publication type:

Article

Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005276

By:

Prigent, Sylvain;
Frioux, Clémence;
Dittami, Simon M.;
Thiele, Sven;
Larhlimi, Abdelhalim;
Collet, Guillaume;
Gutknecht, Fabien;
Got, Jeanne;
Eveillard, Damien;
Bourdon, Jérémie;
Plewniak, Frédéric;
Tonon, Thierry;
Siegel, Anne

Publication type:

Article

Identification of Entry Factors Involved in Hepatitis C Virus Infection Based on Host-Mimicking Short Linear Motifs.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005368

By:

Chiang, Austin W. T.;
Wu, Walt Y. L.;
Wang, Ting;
Hwang, Ming-Jing

Publication type:

Article

Correction: Suppressed Expression of T-Box Transcription Factors Is Involved in Senescence in Chronic Obstructive Pulmonary Disease.

Published in:

2017

By:

null, null

Publication type:

Correction Notice

A Validated Multiscale In-Silico Model for Mechano-sensitive Tumour Angiogenesis and Growth.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005259

By:

Vavourakis, Vasileios;
Wijeratne, Peter A.;
Shipley, Rebecca;
Loizidou, Marilena;
Stylianopoulos, Triantafyllos;
Hawkes, David J.

Publication type:

Article

The Flash-Lag Effect as a Motion-Based Predictive Shift.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005068

By:

Khoei, Mina A.;
Masson, Guillaume S.;
Perrinet, Laurent U.

Publication type:

Article

The Potential Role of Direct and Indirect Contacts on Infection Spread in Dairy Farm Networks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005301

By:

Rossi, Gianluigi;
De Leo, Giulio A.;
Pongolini, Stefano;
Natalini, Silvano;
Zarenghi, Luca;
Ricchi, Matteo;
Bolzoni, Luca

Publication type:

Article

THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites.

Published in:

2017

By:

Chang, Hsiao-Han;
Worby, Colin J.;
Yeka, Adoke;
Nankabirwa, Joaniter;
Kamya, Moses R.;
Staedke, Sarah G.;
Dorsey, Grant;
Murphy, Maxwell;
Neafsey, Daniel E.;
Jeffreys, Anna E.;
Hubbart, Christina;
Rockett, Kirk A.;
Amato, Roberto;
Kwiatkowski, Dominic P.;
Buckee, Caroline;
Greenhouse, Bryan

Publication type:

Product Review

The language of geometry: Fast comprehension of geometrical primitives and rules in human adults and preschoolers.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005273

By:

Amalric, Marie;
Wang, Liping;
Pica, Pierre;
Figueira, Santiago;
Sigman, Mariano;
Dehaene, Stanislas

Publication type:

Article

Optogenetic Stimulation Shifts the Excitability of Cerebral Cortex from Type I to Type II: Oscillation Onset and Wave Propagation.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005349

By:

Heitmann, Stewart;
Rule, Michael;
Truccolo, Wilson;
Ermentrout, Bard

Publication type:

Article

Genome-Wide Association between Transcription Factor Expression and Chromatin Accessibility Reveals Regulators of Chromatin Accessibility.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005311

By:

Lamparter, David;
Marbach, Daniel;
Rueedi, Rico;
Bergmann, Sven;
Kutalik, Zoltán

Publication type:

Article

Inferring the Chemotactic Strategy of P. putida and E. coli Using Modified Kramers-Moyal Coefficients.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005329

By:

Pohl, Oliver;
Hintsche, Marius;
Alirezaeizanjani, Zahra;
Seyrich, Maximilian;
Beta, Carsten;
Stark, Holger

Publication type:

Article

Morphological Transformation and Force Generation of Active Cytoskeletal Networks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005277

By:

Bidone, Tamara Carla;
Jung, Wonyeong;
Maruri, Daniel;
Borau, Carlos;
Kamm, Roger D.;
Kim, Taeyoon

Publication type:

Article

Gene Expression Noise Enhances Robust Organization of the Early Mammalian Blastocyst.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005320

By:

Holmes, William R.;
Reyes de Mochel, Nabora Soledad;
Wang, Qixuan;
Du, Huijing;
Peng, Tao;
Chiang, Michael;
Cinquin, Olivier;
Cho, Ken;
Nie, Qing

Publication type:

Article

Computational Account of Spontaneous Activity as a Signature of Predictive Coding.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005355

By:

Koren, Veronika;
Denève, Sophie

Publication type:

Article

High Affinity vs. Native Fibronectin in the Modulation of αvβ3 Integrin Conformational Dynamics: Insights from Computational Analyses and Implications for Molecular Design.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005334

By:

Paladino, Antonella;
Civera, Monica;
Belvisi, Laura;
Colombo, Giorgio

Publication type:

Article

Quantitative Comparison of Abundance Structures of Generalized Communities: From B-Cell Receptor Repertoires to Microbiomes.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005362

By:

Saeedghalati, Mohammadkarim;
Farahpour, Farnoush;
Budeus, Bettina;
Lange, Anja;
Westendorf, Astrid M.;
Seifert, Marc;
Küppers, Ralf;
Hoffmann, Daniel

Publication type:

Article

Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005331

By:

Fröhlich, Fabian;
Kaltenbacher, Barbara;
Theis, Fabian J.;
Hasenauer, Jan

Publication type:

Article

Modeling an Excitable Biosynthetic Tissue with Inherent Variability for Paired Computational-Experimental Studies.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005342

By:

Gokhale, Tanmay A.;
Kim, Jong M.;
Kirkton, Robert D.;
Bursac, Nenad;
Henriquez, Craig S.

Publication type:

Article

Psychotic Experiences and Overhasty Inferences Are Related to Maladaptive Learning.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005328

By:

Stuke, Heiner;
Stuke, Hannes;
Weilnhammer, Veith Andreas;
Schmack, Katharina

Publication type:

Article

Complex Dynamics of Virus Spread from Low Infection Multiplicities: Implications for the Spread of Oncolytic Viruses.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005241

By:

Rodriguez-Brenes, Ignacio A.;
Hofacre, Andrew;
Fan, Hung;
Wodarz, Dominik

Publication type:

Article

Computing the Dynamic Supramolecular Structural Proteome.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005290

By:

Nussinov, Ruth;
Papin, Jason A.;
Vakser, Ilya

Publication type:

Article

Real Time Multiplicative Memory Amplification Mediated by Whole-Cell Scaling of Synaptic Response in Key Neurons.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005306

By:

Reuveni, Iris;
Ghosh, Sourav;
Barkai, Edi

Publication type:

Article

Identifying T Cell Receptors from High-Throughput Sequencing: Dealing with Promiscuity in TCRα and TCRβ Pairing.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005313

By:

Lee, Edward S.;
Thomas, Paul G.;
Mold, Jeff E.;
Yates, Andrew J.

Publication type:

Article

Effect of the Latent Reservoir on the Evolution of HIV at the Within- and Between-Host Levels.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005228

By:

Doekes, Hilje M.;
Fraser, Christophe;
Lythgoe, Katrina A.

Publication type:

Article

Ten Simple Rules to Enable Multi-site Collaborations through Data Sharing.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005278

By:

Boland, Mary Regina;
Karczewski, Konrad J.;
Tatonetti, Nicholas P.

Publication type:

Article

Contextual Refinement of Regulatory Targets Reveals Effects on Breast Cancer Prognosis of the Regulome.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005340

By:

Andrews, Erik;
Wang, Yue;
Xia, Tian;
Cheng, Wenqing;
Cheng, Chao

Publication type:

Article

A New Approach to Model Pitch Perception Using Sparse Coding.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005338

By:

Barzelay, Oded;
Furst, Miriam;
Barak, Omri

Publication type:

Article

A Likelihood Approach for Real-Time Calibration of Stochastic Compartmental Epidemic Models.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005257

By:

Zimmer, Christoph;
Yaesoubi, Reza;
Cohen, Ted

Publication type:

Article

Computational Analysis of Residue Interaction Networks and Coevolutionary Relationships in the Hsp70 Chaperones: A Community-Hopping Model of Allosteric Regulation and Communication.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005299

By:

Stetz, Gabrielle;
Verkhivker, Gennady M.

Publication type:

Article

A Two-Locus Model of the Evolution of Insecticide Resistance to Inform and Optimise Public Health Insecticide Deployment Strategies.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005327

By:

Levick, Bethany;
South, Andy;
Hastings, Ian M.

Publication type:

Article

A General Shear-Dependent Model for Thrombus Formation.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005291

By:

Yazdani, Alireza;
Li, He;
Humphrey, Jay D.;
Karniadakis, George Em

Publication type:

Article

Entropy Transfer between Residue Pairs and Allostery in Proteins: Quantifying Allosteric Communication in Ubiquitin.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005319

By:

Hacisuleyman, Aysima;
Erman, Burak

Publication type:

Article

The Power of Malaria Vaccine Trials Using Controlled Human Malaria Infection.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005255

By:

Coffeng, Luc E.;
Hermsen, Cornelus C.;
Sauerwein, Robert W.;
de Vlas, Sake J.

Publication type:

Article

Pain: A Statistical Account.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005142

By:

Tabor, Abby;
Thacker, Michael A.;
Moseley, G. Lorimer;
Körding, Konrad P.

Publication type:

Article

Approximate Inference for Time-Varying Interactions and Macroscopic Dynamics of Neural Populations.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005309

By:

Donner, Christian;
Obermayer, Klaus;
Shimazaki, Hideaki

Publication type:

Article

A Looping-Based Model for Quenching Repression.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005337

By:

Pollak, Yaroslav;
Goldberg, Sarah;
Amit, Roee

Publication type:

Article

Inference of Transmission Network Structure from HIV Phylogenetic Trees.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005316

By:

Giardina, Federica;
Romero-Severson, Ethan Obie;
Albert, Jan;
Britton, Tom;
Leitner, Thomas

Publication type:

Article

Correction: A Stochastic Model of the Yeast Cell Cycle Reveals Roles for Feedback Regulation in Limiting Cellular Variability.

Published in:

2017

By:

null, null

Publication type:

Correction Notice