Works matching IS 1553734X AND DT 2015 AND VI 11 AND IP 2

Results: 47

Correlations and Functional Connections in a Population of Grid Cells.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004052

By:

Dunn, Benjamin;
Mørreaunet, Maria;
Roudi, Yasser

Publication type:

Article

When Less Is More: Non-monotonic Spike Sequence Processing in Neurons.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004002

By:

Arnoldt, Hinrich;
Chang, Shuwen;
Jahnke, Sven;
Urmersbach, Birk;
Taschenberger, Holger;
Timme, Marc

Publication type:

Article

A Quick Guide for Building a Successful Bioinformatics Community.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003972

By:

Budd, Aidan;
Corpas, Manuel;
Brazas, Michelle D.;
Fuller, Jonathan C.;
Goecks, Jeremy;
Mulder, Nicola J.;
Michaut, Magali;
Ouellette, B. F. Francis;
Pawlik, Aleksandra;
Blomberg, Niklas

Publication type:

Article

Integrative Analysis of Circadian Transcriptome and Metabolic Network Reveals the Role of De Novo Purine Synthesis in Circadian Control of Cell Cycle.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004086

By:

Li, Ying;
Li, Guang;
Görling, Benjamin;
Luy, Burkhard;
Du, Jiulin;
Yan, Jun

Publication type:

Article

ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004041

By:

Didelot, Xavier;
Wilson, Daniel J.

Publication type:

Article

Embryonic Stem Cell Specific “Master” Replication Origins at the Heart of the Loss of Pluripotency.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003969

By:

Julienne, Hanna;
Audit, Benjamin;
Arneodo, Alain

Publication type:

Article

Developing a Molecular Roadmap of Drug-Food Interactions.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004048

By:

Jensen, Kasper;
Ni, Yueqiong;
Panagiotou, Gianni;
Kouskoumvekaki, Irene

Publication type:

Article

Input-Dependent Frequency Modulation of Cortical Gamma Oscillations Shapes Spatial Synchronization and Enables Phase Coding.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004072

By:

Lowet, Eric;
Roberts, Mark;
Hadjipapas, Avgis;
Peter, Alina;
van der Eerden, Jan;
De Weerd, Peter

Publication type:

Article

Data-Driven Prediction and Design of bZIP Coiled-Coil Interactions.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004046

By:

Potapov, Vladimir;
Kaplan, Jenifer B.;
Keating, Amy E.

Publication type:

Article

The Roles of Post-translational Modifications in the Context of Protein Interaction Networks.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004049

By:

Duan, Guangyou;
Walther, Dirk

Publication type:

Article

Co-evolutionary Dynamics of Collective Action with Signaling for a Quorum.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004101

By:

Pacheco, Jorge M.;
Vasconcelos, Vítor V.;
Santos, Francisco C.;
Skyrms, Brian

Publication type:

Article

Exploring Bacterial Organelle Interactomes: A Model of the Protein-Protein Interaction Network in the Pdu Microcompartment.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004067

By:

Jorda, Julien;
Liu, Yu;
Bobik, Thomas A.;
Yeates, Todd O.

Publication type:

Article

Membrane-Mediated Interaction between Strongly Anisotropic Protein Scaffolds.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004054

By:

Schweitzer, Yonatan;
Kozlov, Michael M.

Publication type:

Article

Critical Slowing Down Governs the Transition to Neuron Spiking.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004097

By:

Meisel, Christian;
Klaus, Andreas;
Kuehn, Christian;
Plenz, Dietmar

Publication type:

Article

A Biologically Constrained, Mathematical Model of Cortical Wave Propagation Preceding Seizure Termination.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004065

By:

González-Ramírez, Laura R.;
Ahmed, Omar J.;
Cash, Sydney S.;
Wayne, C. Eugene;
Kramer, Mark A.

Publication type:

Article

How to Write a Presubmission Inquiry.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004098

By:

Lengauer, Thomas;
Nussinov, Ruth

Publication type:

Article

Potential Benefits of Cattle Vaccination as a Supplementary Control for Bovine Tuberculosis.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004038

By:

Conlan, Andrew J. K.;
Brooks Pollock, Ellen;
McKinley, Trevelyan J.;
Mitchell, Andrew P.;
Jones, Gareth J.;
Vordermeier, Martin;
Wood, James L. N.

Publication type:

Article

HIV Competition Dynamics over Sexual Networks: First Comer Advantage Conserves Founder Effects.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004093

By:

Ferdinandy, Bence;
Mones, Enys;
Vicsek, Tamás;
Müller, Viktor

Publication type:

Article

Quantifying Two-Dimensional Filamentous and Invasive Growth Spatial Patterns in Yeast Colonies.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004070

By:

Binder, Benjamin J.;
Sundstrom, Joanna F.;
Gardner, Jennifer M.;
Jiranek, Vladimir;
Oliver, Stephen G.

Publication type:

Article

Integrative Multi-omics Module Network Inference with Lemon-Tree.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003983

By:

Bonnet, Eric;
Calzone, Laurence;
Michoel, Tom

Publication type:

Article

Comprehensive Sieve Analysis of Breakthrough HIV-1 Sequences in the RV144 Vaccine Efficacy Trial.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003973

By:

Edlefsen, Paul T.;
Rolland, Morgane;
Hertz, Tomer;
Tovanabutra, Sodsai;
Gartland, Andrew J.;
deCamp, Allan C.;
Magaret, Craig A.;
Ahmed, Hasan;
Gottardo, Raphael;
Juraska, Michal;
McCoy, Connor;
Larsen, Brendan B.;
Sanders-Buell, Eric;
Carrico, Chris;
Menis, Sergey;
Bose, Meera;
null, null;
Arroyo, Miguel A.;
O’Connell, Robert J.;
Nitayaphan, Sorachai

Publication type:

Article

A Human Platelet Calcium Calculator Trained by Pairwise Agonist Scanning.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004118

By:

Lee, Mei Yan;
Diamond, Scott L.

Publication type:

Article

A Theoretical Justification for Single Molecule Peptide Sequencing.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004080

By:

Swaminathan, Jagannath;
Boulgakov, Alexander A.;
Marcotte, Edward M.

Publication type:

Article

Ten Simple Rules for Lifelong Learning, According to Hamming.

Published in:

2015

By:

Erren, Thomas C.;
Slanger, Tracy E.;
Groß, J. Valérie;
Bourne, Philip E.;
Cullen, Paul

Publication type:

Editorial

PathVisio 3: An Extendable Pathway Analysis Toolbox.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004085

By:

Kutmon, Martina;
van Iersel, Martijn P.;
Bohler, Anwesha;
Kelder, Thomas;
Nunes, Nuno;
Pico, Alexander R.;
Evelo, Chris T.

Publication type:

Article

Cyclin and DNA Distributed Cell Cycle Model for GS-NS0 Cells.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004062

By:

García Münzer, David G.;
Kostoglou, Margaritis;
Georgiadis, Michael C.;
Pistikopoulos, Efstratios N.;
Mantalaris, Athanasios

Publication type:

Article

Modulation of Network Excitability by Persistent Activity: How Working Memory Affects the Response to Incoming Stimuli.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004059

By:

Tartaglia, Elisa M.;
Brunel, Nicolas;
Mongillo, Gianluigi

Publication type:

Article

PLOS Computational Biology 2014 Reviewer Thank You.

Published in:: PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004184
Publication type:: Article

Protein Sectors: Statistical Coupling Analysis versus Conservation.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004091

By:

Teşileanu, Tiberiu;
Colwell, Lucy J.;
Leibler, Stanislas

Publication type:

Article

An Integrated Approach to Reconstructing Genome-Scale Transcriptional Regulatory Networks.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004103

By:

Imam, Saheed;
Noguera, Daniel R.;
Donohue, Timothy J.

Publication type:

Article

Communication over the Network of Binary Switches Regulates the Activation of A<sub>2A</sub> Adenosine Receptor.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004044

By:

Lee, Yoonji;
Choi, Sun;
Hyeon, Changbong

Publication type:

Article

Protein Complexes in Bacteria.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004107

By:

Caufield, J. Harry;
Abreu, Marco;
Wimble, Christopher;
Uetz, Peter

Publication type:

Article

Selectivity by Small-Molecule Inhibitors of Protein Interactions Can Be Driven by Protein Surface Fluctuations.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004081

By:

Johnson, David K.;
Karanicolas, John

Publication type:

Article

Statistical Mechanics Provides Novel Insights into Microtubule Stability and Mechanism of Shrinkage.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004099

By:

Jain, Ishutesh;
Inamdar, Mandar M.;
Padinhateeri, Ranjith

Publication type:

Article

The Molecular Clock of Neutral Evolution Can Be Accelerated or Slowed by Asymmetric Spatial Structure.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004108

By:

Allen, Benjamin;
Sample, Christine;
Dementieva, Yulia;
Medeiros, Ruben C.;
Paoletti, Christopher;
Nowak, Martin A.

Publication type:

Article

Multi-timescale Modeling of Activity-Dependent Metabolic Coupling in the Neuron-Glia-Vasculature Ensemble.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004036

By:

Jolivet, Renaud;
Coggan, Jay S.;
Allaman, Igor;
Magistretti, Pierre J.

Publication type:

Article

Resting-State Temporal Synchronization Networks Emerge from Connectivity Topology and Heterogeneity.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004100

By:

Ponce-Alvarez, Adrián;
Deco, Gustavo;
Hagmann, Patric;
Romani, Gian Luca;
Mantini, Dante;
Corbetta, Maurizio

Publication type:

Article

Stochastic Modeling of Mouse Motor Activity under Deep Brain Stimulation: The Extraction of Arousal Information.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003883

By:

Keenan, Daniel M.;
Quinkert, Amy W.;
Pfaff, Donald W.

Publication type:

Article

Confronting the Ethical Challenges of Big Data in Public Health.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004073

By:

Bourne, Philip E.

Publication type:

Article

DNA Exit Ramps Are Revealed in the Binding Landscapes Obtained from Simulations in Helical Coordinates.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003980

By:

Echeverria, Ignacia;
Papoian, Garegin A.

Publication type:

Article

Mesoscopic Segregation of Excitation and Inhibition in a Brain Network Model.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004007

By:

Malagarriga, Daniel;
Villa, Alessandro E. P.;
Garcia-Ojalvo, Jordi;
Pons, Antonio J.

Publication type:

Article

Segment-Specific Adhesion as a Driver of Convergent Extension.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004092

By:

Vroomans, Renske M. A.;
Hogeweg, Paulien;
ten Tusscher, Kirsten H. W. J.

Publication type:

Article

Ethical Challenges of Big Data in Public Health.

Published in:

2015

By:

Vayena, Effy;
Salathé, Marcel;
Madoff, Lawrence C.;
Brownstein, John S.

Publication type:

Editorial

A Unified Model of Shoot Tropism in Plants: Photo-, Gravi- and Propio-ception.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004037

By:

Bastien, Renaud;
Douady, Stéphane;
Moulia, Bruno

Publication type:

Article

Computer Simulations Suggest a Key Role of Membranous Nanodomains in Biliary Lipid Secretion.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004033

By:

Eckstein, Johannes;
Berndt, Nikolaus;
Holzhütter, Hermann-Georg

Publication type:

Article

Heterogeneous CD8<sup>+</sup> T Cell Migration in the Lymph Node in the Absence of Inflammation Revealed by Quantitative Migration Analysis.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004058

By:

Banigan, Edward J.;
Harris, Tajie H.;
Christian, David A.;
Hunter, Christopher A.;
Liu, Andrea J.

Publication type:

Article

Cell Cycle Control by a Minimal Cdk Network.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pcbi.1004056

By:

Gérard, Claude;
Tyson, John J.;
Coudreuse, Damien;
Novák, Béla

Publication type:

Article