Works matching IS 1553734X AND DT 2015 AND VI 11 AND IP 1

Results: 32

Mapping the Pareto Optimal Design Space for a Functionally Deimmunized Biotherapeutic Candidate.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003988

By:

Salvat, Regina S.;
Parker, Andrew S.;
Choi, Yoonjoo;
Bailey-Kellogg, Chris;
Griswold, Karl E.

Publication type:

Article

GenomicScape: An Easy-to-Use Web Tool for Gene Expression Data Analysis. Application to Investigate the Molecular Events in the Differentiation of B Cells into Plasma Cells.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004077

By:

Kassambara, Alboukadel;
Rème, Thierry;
Jourdan, Michel;
Fest, Thierry;
Hose, Dirk;
Tarte, Karin;
Klein, Bernard

Publication type:

Article

Brain Network Adaptability across Task States.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004029

By:

Davison, Elizabeth N.;
Schlesinger, Kimberly J.;
Bassett, Danielle S.;
Lynall, Mary-Ellen;
Miller, Michael B.;
Grafton, Scott T.;
Carlson, Jean M.

Publication type:

Article

ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004087

By:

Karp, Peter D.;
Berger, Bonnie;
Kovats, Diane;
Lengauer, Thomas;
Linial, Michal;
Sabeti, Pardis;
Hide, Winston;
Rost, Burkhard

Publication type:

Article

Identification of Constrained Cancer Driver Genes Based on Mutation Timing.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004027

By:

Sakoparnig, Thomas;
Fried, Patrick;
Beerenwinkel, Niko

Publication type:

Article

A Computational Approach to Identifying Gene-microRNA Modules in Cancer.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004042

By:

Jin, Daeyong;
Lee, Hyunju

Publication type:

Article

A New Algorithm to Diagnose Atrial Ectopic Origin from Multi Lead ECG Systems - Insights from 3D Virtual Human Atria and Torso.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004026

By:

Alday, Erick A. Perez;
Colman, Michael A.;
Langley, Philip;
Butters, Timothy D.;
Higham, Jonathan;
Workman, Antony J.;
Hancox, Jules C.;
Zhang, Henggui

Publication type:

Article

A Computational Framework for 3D Mechanical Modeling of Plant Morphogenesis with Cellular Resolution.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003950

By:

Boudon, Frédéric;
Chopard, Jérôme;
Ali, Olivier;
Gilles, Benjamin;
Hamant, Olivier;
Boudaoud, Arezki;
Traas, Jan;
Godin, Christophe

Publication type:

Article

Systems Level Analysis of Systemic Sclerosis Shows a Network of Immune and Profibrotic Pathways Connected with Genetic Polymorphisms.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004005

By:

Mahoney, J. Matthew;
Taroni, Jaclyn;
Martyanov, Viktor;
Wood, Tammara A.;
Greene, Casey S.;
Pioli, Patricia A.;
Hinchcliff, Monique E.;
Whitfield, Michael L.

Publication type:

Article

Orientation Selectivity in Inhibition-Dominated Networks of Spiking Neurons: Effect of Single Neuron Properties and Network Dynamics.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004045

By:

Sadeh, Sadra;
Rotter, Stefan

Publication type:

Article

Simulating the Complex Cell Design of Trypanosoma brucei and Its Motility.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003967

By:

Alizadehrad, Davod;
Krüger, Timothy;
Engstler, Markus;
Stark, Holger

Publication type:

Article

The Formation of Multi-synaptic Connections by the Interaction of Synaptic and Structural Plasticity and Their Functional Consequences.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004031

By:

Fauth, Michael;
Wörgötter, Florentin;
Tetzlaff, Christian

Publication type:

Article

The Thalidomide-Binding Domain of Cereblon Defines the CULT Domain Family and Is a New Member of the β-Tent Fold.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004023

By:

Lupas, Andrei N.;
Zhu, Hongbo;
Korycinski, Mateusz

Publication type:

Article

The Interaction between Seasonality and Pulsed Interventions against Malaria in Their Effects on the Reproduction Number.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004057

By:

Griffin, Jamie T.

Publication type:

Article

What Makes a Protein Sequence a Prion?

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004013

By:

Sabate, Raimon;
Rousseau, Frederic;
Schymkowitz, Joost;
Ventura, Salvador

Publication type:

Article

Bayesian History Matching of Complex Infectious Disease Models Using Emulation: A Tutorial and a Case Study on HIV in Uganda.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003968

By:

Andrianakis, Ioannis;
Vernon, Ian R.;
McCreesh, Nicky;
McKinley, Trevelyan J.;
Oakley, Jeremy E.;
Nsubuga, Rebecca N.;
Goldstein, Michael;
White, Richard G.

Publication type:

Article

Synaptic Plasticity Enables Adaptive Self-Tuning Critical Networks.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004043

By:

Stepp, Nigel;
Plenz, Dietmar;
Srinivasa, Narayan

Publication type:

Article

Modulation of Elementary Calcium Release Mediates a Transition from Puffs to Waves in an IP<sub>3</sub>R Cluster Model.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003965

By:

Rückl, Martin;
Parker, Ian;
Marchant, Jonathan S.;
Nagaiah, Chamakuri;
Johenning, Friedrich W.;
Rüdiger, Sten

Publication type:

Article

Computation in Dynamically Bounded Asymmetric Systems.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004039

By:

Rutishauser, Ueli;
Slotine, Jean-Jacques;
Douglas, Rodney

Publication type:

Article

A RESTful API for Accessing Microbial Community Data for MG-RAST.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004008

By:

Wilke, Andreas;
Bischof, Jared;
Harrison, Travis;
Brettin, Tom;
D'Souza, Mark;
Gerlach, Wolfgang;
Matthews, Hunter;
Paczian, Tobias;
Wilkening, Jared;
Glass, Elizabeth M.;
Desai, Narayan;
Meyer, Folker

Publication type:

Article

Novel Inhibitors Induce Large Conformational Changes of GAB1 Pleckstrin Homology Domain and Kill Breast Cancer Cells.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004021

By:

Chen, Lu;
Du-Cuny, Lei;
Moses, Sylvestor;
Dumas, Sabrina;
Song, Zuohe;
Rezaeian, Abdol Hossein;
Lin, Hui-Kuan;
Meuillet, Emmanuelle J.;
Zhang, Shuxing

Publication type:

Article

Inference of Quantitative Models of Bacterial Promoters from Time-Series Reporter Gene Data.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004028

By:

Stefan, Diana;
Pinel, Corinne;
Pinhal, Stéphane;
Cinquemani, Eugenio;
Geiselmann, Johannes;
de Jong, Hidde

Publication type:

Article

System Model Network for Adipose Tissue Signatures Related to Weight Changes in Response to Calorie Restriction and Subsequent Weight Maintenance.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004047

By:

Montastier, Emilie;
Villa-Vialaneix, Nathalie;
Caspar-Bauguil, Sylvie;
Hlavaty, Petr;
Tvrzicka, Eva;
Gonzalez, Ignacio;
Saris, Wim H. M.;
Langin, Dominique;
Kunesova, Marie;
Viguerie, Nathalie

Publication type:

Article

150 Years of the Mass Action Law.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004012

By:

Voit, Eberhard O.;
Martens, Harald A.;
Omholt, Stig W.

Publication type:

Article

Activation of Parallel Fiber Feedback by Spatially Diffuse Stimuli Reduces Signal and Noise Correlations via Independent Mechanisms in a Cerebellum-Like Structure.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004034

By:

Simmonds, Benjamin;
Chacron, Maurice J.

Publication type:

Article

Fast and Accurate Resonance Assignment of Small-to-Large Proteins by Combining Automated and Manual Approaches.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004022

By:

Niklasson, Markus;
Ahlner, Alexandra;
Andresen, Cecilia;
Marsh, Joseph A.;
Lundström, Patrik

Publication type:

Article

Modulation of Calmodulin Lobes by Different Targets: An Allosteric Model with Hemiconcerted Conformational Transitions.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004063

By:

Lai, Massimo;
Brun, Denis;
Edelstein, Stuart J.;
Le Novère, Nicolas

Publication type:

Article

Laminar and Dorsoventral Molecular Organization of the Medial Entorhinal Cortex Revealed by Large-scale Anatomical Analysis of Gene Expression.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004032

By:

Ramsden, Helen L.;
Sürmeli, Gülşen;
McDonagh, Steven G.;
Nolan, Matthew F.

Publication type:

Article

Ten Simple Rules for Organizing an Unconference.

Published in:

2015

By:

Budd, Aidan;
Dinkel, Holger;
Corpas, Manuel;
Fuller, Jonathan C.;
Rubinat, Laura;
Devos, Damien P.;
Khoueiry, Pierre H.;
Förstner, Konrad U.;
Georgatos, Fotis;
Rowland, Francis;
Sharan, Malvika;
Binder, Janos X.;
Grace, Tom;
Traphagen, Karyn;
Gristwood, Adam;
Wood, Natasha T.

Publication type:

Editorial

A Probabilistic Palimpsest Model of Visual Short-term Memory.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004003

By:

Matthey, Loic;
Bays, Paul M.;
Dayan, Peter

Publication type:

Article

Advancements and Challenges in Computational Biology.

Published in:

2015

By:

Nussinov, Ruth

Publication type:

Editorial

Analysis of Individual Protein Regions Provides Novel Insights on Cancer Pharmacogenomics.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.pcbi.1004024

By:

Pardo, Eduard Porta;
Godzik, Adam

Publication type:

Article