Works matching IS 1553734X AND DT 2012 AND VI 8 AND IP 10

Results: 42

Integrating Cellular Metabolism into a Multiscale Whole-Body Model.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002750

By:

Krauss, Markus;
Schaller, Stephan;
Borchers, Steffen;
Findeisen, Rolf;
Lippert, Jörg;
Kuepfer, Lars

Publication type:

Article

Determining Host Metabolic Limitations on Viral Replication via Integrated Modeling and Experimental Perturbation.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002746

By:

Birch, Elsa W.;
Ruggero, Nicholas A.;
Covert, Markus W.

Publication type:

Article

Emergence of the Mitochondrial Reticulum from Fission and Fusion Dynamics.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002745

By:

Sukhorukov, Valerii M.;
Dikov, Daniel;
Reichert, Andreas S.;
Meyer-Hermann, Michael

Publication type:

Article

Evolutionary Analysis of Human Immunodeficiency Virus Type 1 Therapies Based on Conditionally Replicating Vectors.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002744

By:

Ke, Ruian;
Lloyd-Smith, James O.

Publication type:

Article

Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002743

By:

Kembel, Steven W.;
Wu, Martin;
Eisen, Jonathan A.;
Green, Jessica L.

Publication type:

Article

Modeling Protective Anti-Tumor Immunity via Preventative Cancer Vaccines Using a Hybrid Agent-based and Delay Differential Equation Approach.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002742

By:

Kim, Peter S.;
Lee, Peter P.

Publication type:

Article

The Role of Social Contacts and Original Antigenic Sin in Shaping the Age Pattern of Immunity to Seasonal Influenza.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002741

By:

Kucharski, Adam J.;
Gog, Julia R.

Publication type:

Article

Phasic Firing in Vasopressin Cells: Understanding Its Functional Significance through Computational Models.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002740

By:

MacGregor, Duncan J.;
Leng, Gareth

Publication type:

Article

A Structural Systems Biology Approach for Quantifying the Systemic Consequences of Missense Mutations in Proteins.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002738

By:

Cheng, Tammy M. K.;
Goehring, Lucas;
Jeffery, Linda;
Yu-En Lu;
Hayles, Jacqueline;
Novák, Béla;
Bates, Paul A.

Publication type:

Article

Next-Generation Sequencing of Human Mitochondrial Reference Genomes Uncovers High Heteroplasmy Frequency.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002737

By:

Sosa, Maria Ximena;
Sivakumar, I. K. Ashok;
Maragh, Samantha;
Veeramachaneni, Vamsi;
Hariharan, Ramesh;
Parulekar, Minothi;
Fredrikson, Karin M.;
Harkins, Timothy T.;
Lin, Jeffrey;
Feldman, Andrew B.;
Tata, Pramila;
Ehret, Georg B.;
Chakravarti, Aravinda

Publication type:

Article

Membrane-Elasticity Model of Coatless Vesicle Budding Induced by ESCRT Complexes.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002736

By:

Różycki, Bartosz;
Boura, Evzen;
Hurley, James H.;
Hummer, Gerhard

Publication type:

Article

The Effect of Bacterial Recombination on Adaptation on Fitness Landscapes with Limited Peak Accessibility.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002735

By:

Moradigaravand, Danesh;
Engelstädter, Jan

Publication type:

Article

Regulatory Network Structure as a Dominant Determinant of Transcription Factor Evolutionary Rate.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002734

By:

Coulombe-Huntington, Jasmin;
Yu Xia

Publication type:

Article

The Laminar Cortex Model: A New Continuum Cortex Model Incorporating Laminar Architecture.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002733

By:

Du, Jiaxin;
Vegh, Viktor;
Reutens, David C.

Publication type:

Article

Linkers of Cell Polarity and Cell Cycle Regulation in the Fission Yeast Protein Interaction Network.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002732

By:

Vaggi, Federico;
Dodgson, James;
Bajpai, Archana;
Chessel, Anatole;
Jordán, Ferenc;
Sato, Masamitsu;
Carazo-Salas, Rafael Edgardo;
Csikász-Nagy, Attila

Publication type:

Article

How Recent History Affects Perception: The Normative Approach and Its Heuristic Approximation.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002731

By:

Raviv, Ofri;
Ahissar, Merav;
Loewenstein, Yonatan

Publication type:

Article

Estimating the Hidden Burden of Bovine Tuberculosis in Great Britain.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002730

By:

Conlan, Andrew J. K.;
McKinley, Trevelyan J.;
Karolemeas, Katerina;
Pollock, Ellen Brooks;
Goodchild, Anthony V.;
Mitchell, Andrew P.;
Birch, Colin P. D.;
Clifton-Hadley, Richard S.;
Wood, James L. N.

Publication type:

Article

The Dynamics of Naturally Acquired Immunity to Plasmodium falciparum Infection.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002729

By:

Pinkevych, Mykola;
Petravic, Janka;
Chelimo, Kiprotich;
Kazura, James W.;
Moormann, Ann M.;
Davenport, Miles P.

Publication type:

Article

Seven Years; It's Time for a Change.

Published in:

2012

By:

Bourne, Philip E.

Publication type:

Editorial

A Future Vision for PLOS Computational Biology.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002727

By:

Nussinov, Ruth

Publication type:

Article

Spatially Pooled Contrast Responses Predict Neural and Perceptual Similarity of Naturalistic Image Categories.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002726

By:

Groen, Iris I. A.;
Ghebreab, Sennay;
Lamme, Victor A. F.;
Scholte, H. Steven

Publication type:

Article

MOSAIC: A Multiscale Model of Osteogenesis and Sprouting Angiogenesis with Lateral Inhibition of Endothelial Cells.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002724

By:

Carlier, Aurélie;
Geris, Liesbet;
Bentley, Katie;
Carmeliet, Geert;
Carmeliet, Peter;
Van Oosterwyck, Hans

Publication type:

Article

Modeling Dynamic Regulatory Processes in Stroke.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002722

By:

McDermott, Jason E.;
Jarman, Kenneth;
Taylor, Ronald;
Lancaster, Mary;
Shankaran, Harish;
Vartanian, Keri B.;
Stevens, Susan L.;
Stenzel-Poore, Mary P.;
Sanfilippo, Antonio

Publication type:

Article

Probability Fluxes and Transition Paths in a Markovian Model Describing Complex Subunit Cooperativity in HCN2 Channels.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002721

By:

Benndorf, Klaus;
Kusch, Jana;
Schulz, Eckhard

Publication type:

Article

Functional Modules, Structural Topology, and Optimal Activity in Metabolic Networks.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002720

By:

Resendis-Antonio, Osbaldo;
Hernández, Magdalena;
Mora, Yolanda;
Encarnación, Sergio

Publication type:

Article

Predictive Dynamics of Human Pain Perception.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002719

By:

Cecchi, Guillermo A.;
Huang, Lejian;
Hashmi, Javeria Ali;
Baliki, Marwan;
Centeno, María V.;
Rish, Irina;
Apkarian, A. Vania

Publication type:

Article

Very Slow Search and Reach: Failure to Maximize Expected Gain in an Eye-Hand Coordination Task.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002718

By:

Hang Zhang;
Morvan, Camille;
Etezad-Heydari, Louis-Alexandre;
Maloney, Laurence T.

Publication type:

Article

Analysis of Slow (Theta) Oscillations as a Potential Temporal Reference Frame for Information Coding in Sensory Cortices.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002717

By:

Kayser, Christoph;
Ince, Robin A. A.;
Panzeri, Stefano

Publication type:

Article

A Model of Reward- and Effort-Based Optimal Decision Making and Motor Control.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002716

By:

Rigoux, Lionel;
Guigon, Emmanuel

Publication type:

Article

Random Field Model Reveals Structure of the Protein Recombinational Landscape.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002713

By:

Romero, Philip A.;
Arnold, Frances H.

Publication type:

Article

Coding and Decoding with Adapting Neurons: A Population Approach to the Peri-Stimulus Time Histogram.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002711

By:

Naud, Richard;
Gerstner, Wulfram

Publication type:

Article

Molecular Mechanism for the Dual Alcohol Modulation of Cys-loop Receptors.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002710

By:

Murail, Samuel;
Howard, Rebecca J.;
Broemstrup, Torben;
Bertaccini, Edward J.;
Harris, R. Adron;
Trudell, James R.;
Lindahl, Erik

Publication type:

Article

Disease-Associated Mutations Disrupt Functionally Important Regions of Intrinsic Protein Disorder.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002709

By:

Vacic, Vladimir;
Markwick, Phineus R. L.;
Oldfield, Christopher J.;
Xiaoyue Zhao;
Haynes, Chad;
Uversky, Vladimir N.;
Iakoucheva, Lilia M.

Publication type:

Article

CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein Structures.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002708

By:

Chovancova, Eva;
Pavelka, Antonin;
Benes, Petr;
Strnad, Ondrej;
Brezovsky, Jan;
Kozlikova, Barbora;
Gora, Artur;
Sustr, Vilem;
Klvana, Martin;
Medek, Petr;
Biedermannova, Lada;
Sochor, Jiri;
Damborsky, Jiri

Publication type:

Article

Discovering Relations Between Mind, Brain, and Mental Disorders Using Topic Mapping.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002707

By:

Poldrack, Russell A.;
Mumford, Jeanette A.;
Schonberg, Tom;
Kalar, Donald;
Barman, Bishal;
Yarkoni, Tal

Publication type:

Article

Ubiquitin Dynamics in Complexes Reveal Molecular Recognition Mechanisms Beyond Induced Fit and Conformational Selection.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002704

By:

Peters, Jan H.;
De Groot, Bert L.

Publication type:

Article

Osteoprotegerin in Bone Metastases: Mathematical Solution to the Puzzle.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002703

By:

Ryser, Marc D.;
Yiding Qu;
Komarova, Svetlana V.

Publication type:

Article

Evaluating the Adequacy of Gravity Models as a Description of Human Mobility for Epidemic Modelling.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002699

By:

Truscott, James;
Ferguson, Neil M.

Publication type:

Article

Prediction and Dissection of Widely-Varying Association Rate Constants of Actin-Binding Proteins.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002696

By:

Xiaodong Pang;
Zhou, Kenneth H.;
Sanbo Qin;
Huan-Xiang Zhou

Publication type:

Article

Connecting Macroscopic Observables and Microscopic Assembly Events in Amyloid Formation Using Coarse Grained Simulations.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002692

By:

Bieler, Noah S.;
Knowles, Tuomas P. J.;
Frenkel, Daan;
Vácha, Robert

Publication type:

Article

How Entorhinal Grid Cells May Learn Multiple Spatial Scales from a Dorsoventral Gradient of Cell Response Rates in a Self-organizing Map.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002648

By:

Grossberg, Stephen;
Pilly, Praveen K.

Publication type:

Article

Multiple Spike Time Patterns Occur at Bifurcation Points of Membrane Potential Dynamics.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002615

By:

Toups, J. Vincent;
Fellous, Jean-Marc;
Thomas, Peter J.;
Sejnowski, Terrence J.;
Tiesinga, Paul H.

Publication type:

Article