Works matching IS 1553734X AND DT 2012 AND VI 8 AND IP 4

Results: 44

Predictive Features of Persistent Activity Emergence in Regular Spiking and Intrinsic Bursting Model Neurons.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002489

By:

Sidiropoulou, Kyriaki;
Poirazi, Panayiota

Publication type:

Article

Social Interaction, Noise and Antibiotic-Mediated Switches in the Intestinal Microbiota.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002497

By:

Bucci, Vanni;
Bradde, Serena;
Biroli, Giulio;
Xavier, Joao B.

Publication type:

Article

The Effects of NMDA Subunit Composition on Calcium Influx and Spike Timing-Dependent Plasticity in Striatal Medium Spiny Neurons.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002493

By:

Evans, Rebekah C.;
Morera-Herreras, Teresa;
Yihui Cui;
Kai Du;
Sheehan, Tom;
Kotaleski, Jeanette Hellgren;
Venance, Laurent;
Blackwell, Kim T.

Publication type:

Article

Inference of Genotype-Phenotype Relationships in the Antigenic Evolution of Human Influenza A (H3N2) Viruses.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002492

By:

Steinbrück, Lars;
McHardy, Alice Carolyn

Publication type:

Article

Tension and Robustness in Multitasking Cellular Networks.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002491

By:

Wong, Jeffrey V.;
Bochong Li;
Lingchong You

Publication type:

Article

Are Long-Range Structural Correlations Behind the Aggregration Phenomena of Polyglutamine Diseases?

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002501

By:

Moradi, Mahmoud;
Babin, Volodymyr;
Roland, Christopher;
Sagui, Celeste

Publication type:

Article

Rise and Demise of Bioinformatics? Promise and Progress.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002487

By:

Ouzounis, Christos A.

Publication type:

Article

Microarray Analysis of LTR Retrotransposon Silencing Identifies Hdac1 as a Regulator of Retrotransposon Expression in Mouse Embryonic Stem Cells.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002486

By:

Reichmann, Judith;
Crichton, James H.;
Madej, Monika J.;
Taggart, Mary;
Gautier, Philippe;
Garcia-Perez, Jose Luis;
Meehan, Richard R.;
Adams, Ian R.

Publication type:

Article

Testing Biochemistry Revisited: How In Vivo Metabolism Can Be Understood from In Vitro Enzyme Kinetics.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002483

By:

van Eunen, Karen;
Kiewiet, Jose' A. L.;
Westerhoff, Hans V.;
Bakker, Barbara M.

Publication type:

Article

Theoretical Analysis of Competing Conformational Transitions in Superhelical DNA.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002484

By:

Zhabinskaya, Dina;
Benham, Craig J.

Publication type:

Article

Exploring the Contextual Sensitivity of Factors that Determine Cell-to-Cell Variability in Receptor-Mediated Apoptosis.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002482

By:

Gaudet, Suzanne;
Spencer, Sabrina L.;
Chen, William W.;
Sorger, Peter K.

Publication type:

Article

On Conduction in a Bacterial Sodium Channel.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002476

By:

Furini, Simone;
Domene, Carmen

Publication type:

Article

Mapping the Environmental Fitness Landscape of a Synthetic Gene Circuit.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002480

By:

Nevozhay, Dmitry;
Adams, Rhys M.;
Van Itallie, Elizabeth;
Bennett, Matthew R.;
Bal´zsi, G´bor

Publication type:

Article

Establishment and Validation of Computational Model for MT1-MMP Dependent ECM Degradation and Intervention Strategies.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002479

By:

Hoshino, Daisuke;
Koshikawa, Naohiko;
Suzuki, Takashi;
Quaranta, Vito;
Weaver, Alissa M.;
Seiki, Motoharu;
Ichikawa, Kazuhisa

Publication type:

Article

Impact of Adaptation Currents on Synchronization of Coupled Exponential Integrate-and-Fire Neurons.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002478

By:

Ladenbauer, Josef;
Augustin, Moritz;
LieJune Shiau;
Obermayer, Klaus

Publication type:

Article

Computational Design of a PDZ Domain Peptide Inhibitor that Rescues CFTR Activity.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002477

By:

Roberts, Kyle E.;
Cushing, Patrick R.;
Boisguerin, Prisca;
Madden, Dean R.;
Donald, Bruce R.

Publication type:

Article

Modeling Planarian Regeneration: A Primer for Reverse- Engineering the Worm.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002481

By:

Lobo, Daniel;
Beane, Wendy S.;
Levin, Michael

Publication type:

Article

Persisting Viral Sequences Shape Microbial CRISPR-based Immunity.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002475

By:

Weinberger, Ariel D.;
Sun, Christine L.;
Pluciński, Mateusz M.;
Denef, Vincent J.;
Thomas, Brian C.;
Horvath, Philippe;
Barrangou, Rodolphe;
Gilmore, Michael S.;
Getz, Wayne M.;
Banfield, Jillian F.

Publication type:

Article

Geometric Theory Predicts Bifurcations in Minimal Wiring Cost Trees in Biology Are Flat.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002474

By:

Yihwa Kim;
Sinclair, Robert;
Chindapol, Nol;
Kaandorp, Jaap A.;
De Schutter, Erik

Publication type:

Article

Ligand-Dependent Conformations and Dynamics of the Serotonin 5-HT<sub>2A</sub> Receptor Determine Its Activation and Membrane-Driven Oligomerization Properties.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002473

By:

Jufang Shan;
Khelashvili, George;
Mondal, Sayan;
Mehler, Ernest L.;
Weinstein, Harel

Publication type:

Article

Optimization of Muscle Activity for Task-Level Goals Predicts Complex Changes in Limb Forces across Biomechanical Contexts.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002465

By:

McKay, J. Lucas;
Ting, Lena H.

Publication type:

Article

RNA-Seq Mapping and Detection of Gene Fusions with a Suffix Array Algorithm.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002464

By:

Sakarya, Onur;
Breu, Heinz;
Radovich, Milan;
Chen, Yongzhi;
Wang, Yulei N.;
Barbacioru, Catalin;
Utiramerur, Sowmi;
Whitley, Penn P.;
Brockman, Joel P.;
Vatta, Paolo;
Zheng Zhang;
Popescu, Liviu;
Muller, Matthew W.;
Kudlingar, Vidya;
Garg, Nriti;
Li, Chieh-Yuan;
Kong, Benjamin S.;
Bodeau, John P.;
Nutter, Robert C.;
Gu, Jian

Publication type:

Article

Energetic Selection of Topology in Ferredoxins.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002463

By:

Kim, J. Dongun;
Rodriguez-Granillo, Agustina;
Case, David A.;
Nanda, Vikas;
Falkowski, Paul G.

Publication type:

Article

Power-Law Inter-Spike Interval Distributions Infer a Conditional Maximization of Entropy in Cortical Neurons.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002461

By:

Tsubo, Yasuhiro;
Isomura, Yoshikazu;
Fukai, Tomoki

Publication type:

Article

Genome-Scale Modeling of Light-Driven Reductant Partitioning and Carbon Fluxes in Diazotrophic Unicellular Cyanobacterium Cyanothece sp. ATCC 51142.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002460

By:

Vu, Trang T.;
Stolyar, Sergey M.;
Pinchuk, Grigoriy E.;
Hill, Eric A.;
Kucek, Leo A.;
Brown, Roslyn N.;
Lipton, Mary S.;
Osterman, Andrei;
Fredrickson, Jim K.;
Konopka, Allan E.;
Beliaev, Alexander S.;
Reed, Jennifer L.

Publication type:

Article

Optimizing Provider Recruitment for Influenza Surveillance Networks.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002472

By:

Scarpino, Samuel V.;
Dimitrov, Nedialko B.;
Meyers, Lauren Ancel

Publication type:

Article

Exploration of Multi-State Conformational Dynamics and Underlying Global Functional Landscape of Maltose Binding Protein.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002471

By:

Yong Wang;
Chun Tang;
Erkang Wang;
Jin Wang

Publication type:

Article

Determinants of Sexual Network Structure and Their Impact on Cumulative Network Measures.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002470

By:

Schmid, Boris V.;
Kretzschmar, Mirjam

Publication type:

Article

The Impact of Imitation on Vaccination Behavior in Social Contact Networks.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002469

By:

Ndeffo Mbah, Martial L.;
Jingzhou Liu;
Bauch, Chris T.;
Tekel, Yonas I.;
Medlock, Jan;
Meyers, Lauren Ancel;
Galvani, Alison P.

Publication type:

Article

Differences in Cell Division Rates Drive the Evolution of Terminal Differentiation in Microbes.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002468

By:

Rodrigues, Jo7atilde;o F. Matias;
Rankin, Daniel J.;
Rossetti, Valentina;
Wagner, Andreas;
Bagheri, Homayoun C.

Publication type:

Article

Deconvolution of the Cellular Force-Generating Subsystems that Govern Cytokinesis Furrow Ingression.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002467

By:

Poirier, Christopher C.;
Win Pin Ng;
Robinson, Douglas N.;
Iglesias, Pablo A.

Publication type:

Article

Parameters in Dynamic Models of Complex Traits are Containers of Missing Heritability.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002459

By:

Yunpeng Wang;
Gjuvsland, Arne B.;
Vik, Jon Olav;
Smith, Nicolas P.;
Hunter, Peter J.;
Omholt, Stig W.

Publication type:

Article

What Can Causal Networks Tell Us about Metabolic Pathways?

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002458

By:

Blair, Rachael Hageman;
Kliebenstein, Daniel J.;
Churchill, Gary A.

Publication type:

Article

Evolutionary Game Theory and Social Learning Can Determine How Vaccine Scares Unfold.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002452

By:

Bauch, Chris T.;
Bhattacharyya, Samit

Publication type:

Article

Warm Body Temperature Facilitates Energy Efficient Cortical Action Potentials.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002456

By:

Yu, Yuguo;
Hill, Adam P.;
McCormick, David A.

Publication type:

Article

The Emergence and Early Evolution of Biological Carbon- Fixation.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002455

By:

Braakman, Rogier;
Smith, Eric

Publication type:

Article

Quantifying Type-Specific Reproduction Numbers for Nosocomial Pathogens: Evidence for Heightened Transmission of an Asian Sequence Type 239 MRSA Clone.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002454

By:

Cooper, Ben S.;
Kypraios, Theodore;
Batra, Rahul;
Wyncoll, Duncan;
Tosas, Olga;
Edgeworth, Jonathan D.

Publication type:

Article

A New Perceptual Bias Reveals Suboptimal Population Decoding of Sensory Responses.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002453

By:

Putzeys, Tom;
Bethge, Matthias;
Wichmann, Felix;
Wagemans, Johan;
Goris, Robbe

Publication type:

Article

Automatic Filtering and Substantiation of Drug Safety Signals.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002457

By:

Bauer-Mehren, Anna;
Mullingen, Erik M. van;
Avillach, Paul;
Carrascosa, Mar&ieacute;a del Carmen;
Garcia-Serna, Ricard;
Piñero, Janet;
Singh, Bharat;
Lopes, Pedro;
Oliveira, José L.;
Diallo, Gayo;
Helgee, Ernst Ahlberg;
Boyer, Scott;
Mestres, Jordi;
Sanzq, Ferran;
Kors, Jan A.;
Furlong, Laura I.

Publication type:

Article

Evolution of the Multi-Domain Structures of Virulence Genes in the Human Malaria Parasite, Plasmodium falciparum.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002451

By:

Buckee, Caroline O.;
Recker, Mario

Publication type:

Article

Molecular Machines in the Synapse: Overlapping Protein Sets Control Distinct Steps in Neurosecretion.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002450

By:

Cornelisse, L. Niels;
Tsivtsivadze, Evgeni;
Meijer, Marieke;
Dijkstra, Tjeerd M. H.;
Heskes, Tom;
Verhage, Matthijs

Publication type:

Article

Storage of Correlated Patterns in Standard and Bistable Purkinje Cell Models.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002448

By:

Clopath, Claudia;
Nadal, Jean-Pierre;
Brunel, Nicolas

Publication type:

Article

Replication Fork Polarity Gradients Revealed by Megabase-Sized U-Shaped Replication Timing Domains in Human Cell Lines.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002443

By:

Baker, Antoine;
Audit, Benjamin;
Chun-Long Chen;
Moindrot, Benoit;
Leleu, Antoine;
Guilbaud, Guillaume;
Rappailles, Aurélien;
Vaillant, Cédric;
Goldar, Arach;
Mongelard, Fabien;
d'Aubenton-Carafa, Yves;
Hyrien, Olivier;
Thermes, Claude;
Arneodo, Alain

Publication type:

Article

Non-Additive Coupling Enables Propagation of Synchronous Spiking Activity in Purely Random Networks.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002384

By:

Memmesheimer, Raoul-Martin;
Timme, Marc

Publication type:

Article