Works matching IS 1553734X AND DT 2011 AND VI 7 AND IP 12

Results: 45

Genetic Co-Occurrence Network across Sequenced Microbes.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002340

By:

Pan-Jun Kim;
Price, Nathan D.

Publication type:

Article

Radial and Spiral Stream Formation in Proteus mirabilis Colonies.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002332

By:

Chuan Xue;
Budrene, Elena O.;
Othmer, Hans G.

Publication type:

Article

Using Multiple Microenvironments to Find Similar Ligand-Binding Sites: Application to Kinase Inhibitor Binding.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002326

By:

Tianyun Liu;
Altman, Russ B.

Publication type:

Article

Joint Ancestry and Association Testing in Admixed Individuals.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002325

By:

Shriner, Daniel;
Adeyemo, Adebowale;
Rotimi, Charles N.

Publication type:

Article

The Rates of Protein Synthesis and Degradation Account for the Differential Response of Neurons to Spaced and Massed Training Protocols.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002324

By:

Naqib, Faisal;
Farah, Carole A.;
Pack, Christopher C.;
Sossin, Wayne S.

Publication type:

Article

Prediction of Drug Combinations by Integrating Molecular and Pharmacological Data.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002323

By:

Xing-Ming Zhao;
Iskar, Murat;
Zeller, Georg;
Kuhn, Michael;
Van Noort, Vera;
Bork, Peer

Publication type:

Article

Evidence for Sequential and Increasing Activation of Replication Origins along Replication Timing Gradients in the Human Genome.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002322

By:

Guilbaud, Guillaume;
Rappailles, Aurélien;
Baker, Antoine;
Chun-Long Chen;
Arneodo, Alain;
Goldar, Arach;
d'Aubenton-Carafa, Yves;
Thermes, Claude;
Audit, Benjamin;
Hyrien, Olivier

Publication type:

Article

Spatial Guilds in the Serengeti Food Web Revealed by a Bayesian Group Model.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002321

By:

Baskerville, Edward B.;
Dobson, Andy P.;
Bedford, Trevor;
Allesina, Stefano;
Anderson, T. Michael;
Pascual, Mercedes

Publication type:

Article

Genome Comparison of Human and Non-Human Malaria Parasites Reveals Species Subset-Specific Genes Potentially Linked to Human Disease.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002320

By:

Frech, Christian;
Nansheng Chen

Publication type:

Article

Recovering Protein-Protein and Domain-Domain Interactions from Aggregation of IP-MS Proteomics of Coregulator Complexes.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002319

By:

Mazloom, Amin R.;
Dannenfelser, Ruth;
Clark, Neil R.;
Grigoryan, Arsen V.;
Linder, Kathryn M.;
Cardozo, Timothy J.;
Bond, Julia C.;
Boran, Aislyn D. W.;
Iyengar, Ravi;
Malovannaya, Anna;
Lanz, Rainer B.;
Ma'ayan, Avi

Publication type:

Article

The FGGY Carbohydrate Kinase Family: Insights into the Evolution of Functional Specificities.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002318

By:

Ying Zhang;
Zagnitko, Olga;
Rodionova, Irina;
Osterman, Andrei;
Godzik, Adam

Publication type:

Article

Switches, Excitable Responses and Oscillations in the Ring1B/Bmi1 Ubiquitination System.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002317

By:

Lan K. Nguyen;
Muñoz-García, Javier;
Maccario, Helene;
Ciechanover, Aaron;
Kolch, Walter;
Kholodenko, Boris N.

Publication type:

Article

Two Birds with One Stone? Possible Dual-Targeting H1N1 Inhibitors from Traditional Chinese Medicine.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002315

By:

Su-Sen Chang;
Hung-Jin Huang;
Calvin Yu-Chian Chen

Publication type:

Article

Emergent Behaviors from a Cellular Automaton Model for Invasive Tumor Growth in Heterogeneous Microenvironments.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002314

By:

Yang Jiao;
Torquato, Salvatore

Publication type:

Article

Increased Vulnerability of Human Ventricle to Re-entrant Excitation in hERG-linked Variant 1 Short QT Syndrome.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002313

By:

Adeniran, Ismail;
McPate, Mark J.;
Witchel, Harry J.;
Hancox, Jules C.;
Henggui Zhang

Publication type:

Article

Translating Clinical Findings into Knowledge in Drug Safety Evaluation - Drug Induced Liver Injury Prediction System (DILIps).

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002310

By:

Zhichao Liu;
Qiang Shi;
Ding, Don;
Kelly, Reagan;
Hong Fang;
Tong, Weida

Publication type:

Article

Tuning the Mammalian Circadian Clock: Robust Synergy of Two Loops.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002309

By:

Relógio, Angela;
Westermark, Pal O.;
Wallach, Thomas;
Schellenberg, Katja;
Kramer, Achim;
Herzel, Hanspeter

Publication type:

Article

Mathematical Model of Viral Kinetics In Vitro Estimates the Number of E2-CD81 Complexes Necessary for Hepatitis C Virus Entry.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002307

By:

Padmanabhan, Pranesh;
Dixit, Narendra M.

Publication type:

Article

Balanced Synaptic Input Shapes the Correlation between Neural Spike Trains.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002305

By:

Litwin-Kumar, Ashok;
Oswald, Anne-Marie M.;
Urban, Nathaniel N.;
Doiron, Brent

Publication type:

Article

Combinatorial Binding in Human and Mouse Embryonic Stem Cells Identifies Conserved Enhancers Active in Early Embryonic Development.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002304

By:

Göke, Jonathan;
Jung, Marc;
Behrens, Sarah;
Chavez, Lukas;
O'Keeffe, Sean;
Timmermann, Bernd;
Lehrach, Hans;
Adjaye, James;
Vingron, Martin

Publication type:

Article

A Hierarchical Neuronal Model for Generation and Online Recognition of Birdsongs.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002303

By:

Yildiz, Izzet B.;
Kiebel, Stefan J.

Publication type:

Article

Predictability of Evolutionary Trajectories in Fitness Landscapes.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002302

By:

Lobkovsky, Alexander E.;
Wolf, Yuri I.;
Koonin, Eugene V.

Publication type:

Article

Coherent Conformational Degrees of Freedom as a Structural Basis for Allosteric Communication.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002301

By:

Mitternacht, Simon;
Berezovsky, Igor N.

Publication type:

Article

Systematic Search for Recipes to Generate Induced Pluripotent Stem Cells.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002300

By:

Rui Chang;
Shoemaker, Robert;
Wei Wang

Publication type:

Article

Modeling Brain Resonance Phenomena Using a Neural Mass Model.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002298

By:

Spiegler, Andreas;
Knösche, Thomas R.;
Schwab, Karin;
Haueisen, Jens;
Atay, Fatihcan M.

Publication type:

Article

Information Routing Driven by Background Chatter in a Signaling Network.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002297

By:

Domedel-Puig., Nu´ria;
Rue´, Pau;
Pons, Antonio J.;
García-Ojalvo, Jordi

Publication type:

Article

Structural Insights into the Inhibition of Cytosolic 5'-Nucleotidase II (cN-II) by Ribonucleoside 5'-Monophosphate Analogues.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002295

By:

Gallier, Franck;
Lallemand, Perrine;
Jordheim, Lars P.;
Dumontet, Charles;
Pe´rigaud, Christian;
Lionne, Corinne;
Peyrottes, Suzanne;
Chaloin, Laurent;
Meurillon, Maïa

Publication type:

Article

Probabilistic Inference in General Graphical Models through Sampling in Stochastic Networks of Spiking Neurons.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002294

By:

Pecevski, Dejan;
Buesing, Lars;
Maass, Wolfgang

Publication type:

Article

A Tale of Two Stories: Astrocyte Regulation of Synaptic Depression and Facilitation.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002293

By:

Volman, Vladislav;
Berry, Hugues;
Ben-Jacob, Eshel;
De Pittà, Maurizio

Publication type:

Article

Estimated Comparative Integration Hotspots Identify Different Behaviors of Retroviral Gene Transfer Vectors.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002292

By:

Ambrosi, Alessandro;
Glad, Ingrid K.;
Pellin, Danilo;
Cattoglio, Claudia;
Mavilio, Fulvio;
Di Serio, Clelia;
Frigessi, Arnoldo

Publication type:

Article

Of Toasters and Molecular Ticker Tapes.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002291

By:

Kording, Konrad P.

Publication type:

Article

Dynamics of Mutant Cells in Hierarchical Organized Tissues.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002290

By:

Werner, Benjamin;
Dingli, David;
Lenaerts, Tom;
Pacheco, Jorge M.;
Traulsen, Arne

Publication type:

Article

Modelling the Spread of HIV Immune Escape Mutants in a Vaccinated Population.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002289

By:

Fryer, Helen R.;
McLean, Angela R.

Publication type:

Article

Integrating Bioinformatics Tools to Handle Glycosylation.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002285

By:

Mazola, Yuliet;
Chinea, Glay;
Musacchio, Alexis

Publication type:

Article

Chemotaxis when Bacteria Remember: Drift versus Diffusion.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002283

By:

Chatterjee, Sakuntala;
Silveira, Rava Azeredo da;
Kafri, Yariv

Publication type:

Article

Role of Histone Tails in Structural Stability of the Nucleosome.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002279

By:

Biswas, Mithun;
Voltz, Karine;
Smith, Jeremy C.;
Langowski, Jo¨rg

Publication type:

Article

Genomics and Privacy: Implications of the New Reality of Closed Data for the Field.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002278

By:

Greenbaum, Dov;
Sboner, Andrea;
Mu, Xinmeng Jasmine;
Gerstein, Mark

Publication type:

Article

Computational Mass Spectrometry--Based Proteomics.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002277

By:

Ka¨ll, Lukas;
Vitek, Olga

Publication type:

Article

BeadArray Expression Analysis Using Bioconductor.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002276

By:

Ritchie, Matthew E.;
Dunning, Mark J.;
Smith, Mike L.;
Wei Shi;
Lynch, Andy G.

Publication type:

Article

A Whole-Body Model for Glycogen Regulation Reveals a Critical Role for Substrate Cycling in Maintaining Blood Glucose Homeostasis.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002272

By:

Ke Xu;
Morgan, Kevin T.;
Gehris, Abby Todd;
Elston, Timothy C.;
Gomez, Shawn M.

Publication type:

Article

Multiscale Modeling of Red Blood Cell Mechanics and Blood Flow in Malaria.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002270

By:

Fedosov, Dmitry A.;
Huan Lei;
Caswell, Bruce;
Suresh, Subra;
Karniadakis, George E.

Publication type:

Article

Identifying Single Copy Orthologs in Metazoa.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002269

By:

Creevey, Christopher J.;
Muller, Jean;
Doerks, Tobias;
Thompson, Julie D.;
Arendt, Detlev;
Bork, Peer

Publication type:

Article

Dominant Glint Based Prey Localization in Horseshoe Bats: A Possible Strategy for Noise Rejection.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002268

By:

Vanderelst, Dieter;
Reijniers, Jonas;
Firzlaff, Uwe;
Peremans, Herbert

Publication type:

Article

Validation of Skeletal Muscle cis-Regulatory Module Predictions Reveals Nucleotide Composition Bias in Functional Enhancers.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002256

By:

Kwon, Andrew T.;
Chou, Alice Yi;
Arenillas, David J.;
Wasserman, Wyeth W.

Publication type:

Article

Comparative Microbial Modules Resource: Generation and Visualization of Multi-species Biclusters.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pcbi.1002228

By:

Kacmarczyk, Thadeous;
Waltman, Peter;
Bate, Ashley;
Eichenberger, Patrick;
Bonneau, Richard

Publication type:

Article