Works matching IS 1553734X AND DT 2009 AND VI 5 AND IP 4

Results: 34

Allosteric Transitions of Supramolecular Systems Explored by Network Models: Application to Chaperonin GroEL.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000360

By:

Zheng Yang;
Májek, Peter;
Bahar, Ivet

Publication type:

Article

Mapping Gene Associations in Human Mitochondria using Clinical Disease Phenotypes.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000374

By:

Scharfe, Curt;
Henry Horng-Shing Lu;
Neuenburg, Jutta K.;
Allen, Edward A.;
Guan-Cheng Li;
Klopstock, Thomas;
Cowan, Tina M.;
Enns, Gregory M.;
Davis, Ronald W.

Publication type:

Article

Adventures in Semantic Publishing: Exemplar Semantic Enhancements of a Research Article.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000361

By:

Shotton, David;
Portwin, Katie;
Klyne, Graham;
Miles, Alistair

Publication type:

Article

Webb Miller and Trey Ideker To Receive Top International Bioinformatics Awards for 2009 from the International Society for Computational Biology.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000375

By:

McKay, B. J. Morrison;
Sansom, Clare

Publication type:

Article

Polymorphism Data Can Reveal the Origin of Species Abundance Statistics.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000359

By:

Maruvka, Yosef E.;
Shnerb, Nadav M.

Publication type:

Article

A Structural Model of the Pore-Forming Region of the Skeletal Muscle Ryanodine Receptor (RyR1).

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000367

By:

Ramachandran, Srinivas;
Serohijos, Adrian W. R.;
Le Xu;
Meissner, Gerhard;
Dokholyan, Nikolay V.

Publication type:

Article

The Role of the Frank-Starling Law in the Transduction of Cellular Work to Whole Organ Pump Function: A Computational Modeling Analysis.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000371

By:

Niederer, Steven A.;
Smith, Nicolas P.

Publication type:

Article

Design Principles for Riboswitch Function.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000363

By:

Beisel, Chase L.;
Smolke, Christina D.

Publication type:

Article

A Bipolar Clamp Mechanism for Activation of Jak-Family Protein Tyrosine Kinases.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000364

By:

Barua, Dipak;
Faeder, James R.;
Haugh, Jason M.

Publication type:

Article

Divisive Gain Modulation with Dynamic Stimuli in Integrate-and-Fire Neurons.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000365

By:

Cheng Ly;
Doiron, Brent

Publication type:

Article

Ten Simple Rules To Combine Teaching and Research.

Published in:

2009

By:

Vicens, Quentin;
Bourne, Philip E.

Publication type:

Editorial

Amyloidogenesis Abolished by Proline Substitutions but Enhanced by Lipid Binding.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000357

By:

Ping Jiang;
Weixin Xu;
Yuguang Mu

Publication type:

Article

Tumor-Immune Interaction, Surgical Treatment, and Cancer Recurrence in a Mathematical Model of Melanoma.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000362

By:

Eikenberry, Steffen;
Thalhauser, Craig;
Yang Kuang

Publication type:

Article

Estimating the Location and Spatial Extent of a Covert Anthrax Release.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000356

By:

Legrand, Judith;
Egan, Joseph R.;
Hall, Ian M.;
Cauchemez, Simon;
Leach, Steve;
Ferguson, Neil M.

Publication type:

Article

An Analytically Solvable Model for Rapid Evolution of Modular Structure.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000355

By:

Kashtan, Nadav;
Mayo, Avi E.;
Kalisky, Tomer;
Alon, Uri

Publication type:

Article

Predicting Phenotypic Diversity and the Underlying Quantitative Molecular Transitions.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000354

By:

Giurumescu, Claudiu A.;
Sternberg, Paul W.;
Asthagiri, Anand R.

Publication type:

Article

A Dynamic Network Approach for the Study of Human Phenotypes.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000353

By:

Hidalgo, César A.;
Blumm, Nicholas;
Barabási, Albert-László;
Christakis, Nicholas A.

Publication type:

Article

Inferring Stabilizing Mutations from Protein Phylogenies: Application to Influenza Hemagglutinin.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000349

By:

Bloom, Jesse D.;
Glassman, Matthew J.

Publication type:

Article

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000352

By:

White, James Robert;
Nagarajan, Niranjan;
Pop, Mihai

Publication type:

Article

Information Flow Analysis of Interactome Networks.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000350

By:

Missiuro, Patrycja Vasilyev;
Kesheng Liu;
Lihua Zou;
Ross, Brian C.;
Guoyan Zhao;
Liu, Jun S.;
Hui Ge

Publication type:

Article

Towards Prediction of Metabolic Products of Polyketide Synthases: An In Silico Analysis.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000351

By:

Yadav, Gitanjali;
Gokhale1, Rajesh S.;
Mohanty, Debasisa

Publication type:

Article

Fuzzy Logic Analysis of Kinase Pathway Crosstalk in TNF/EGF/Insulin-Induced Signaling.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000340

By:

Aldridge, Bree B.;
Saez-Rodriguez, Julio;
Muhlich, Jeremy L.;
Sorger, Peter K.;
Douglas A. Lauffenburger

Publication type:

Article

The Homeostasis of Plasmodium falciparum-Infected Red Blood Cells.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000339

By:

Mauritz, Jakob M. A.;
Esposito, Alessandro;
Ginsburg, Hagai;
Kaminski, Clemens F.;
Tiffert, Teresa;
Lew, Virgilio L.

Publication type:

Article

Maximal Extraction of Biological Information from Genetic Interaction Data.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000347

By:

Carter, Gregory W.;
Galas, David J.;
Galitski, Timothy

Publication type:

Article

Discovering cis-Regulatory RNAs in Shewanella Genomes by Support Vector Machines.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000338

By:

Xing Xu;
Yongmei Ji;
Stormo, Gary D.

Publication type:

Article

The Role of Environmental Transmission in Recurrent Avian Influenza Epidemics.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000346

By:

Breban, Romulus;
Drake, John M.;
Stallknecht, David E.;
Rohani, Pejman

Publication type:

Article

Evolutionary Epidemiology of Drug-Resistance in Space.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000337

By:

Débarre, Florence;
Lenormand, Thomas;
Gandon, Sylvain

Publication type:

Article

Dissociating Variability and Effort as Determinants of Coordination.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000345

By:

O'Sullivan, Ian;
Burdet, Etienne;
Diedrichsen, Jörn

Publication type:

Article

Genome-Wide Functional Divergence after the Symbiosis of Proteobacteria with Insects Unraveled through a Novel Computational Approach.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000344

By:

Toft, Christina;
Williams, Tom A.;
Fares, Mario A.

Publication type:

Article

Probing the Flexibility of Large Conformational Changes in Protein Structures through Local Perturbations.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000343

By:

Ho, Bosco K.;
Agard, David A.

Publication type:

Article

Spontaneous Local Gamma Oscillation Selectively Enhances Neural Network Responsiveness.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000342

By:

Paik, Se-Bum;
Kumar, Tribhawan;
Glaser, Donald A.

Publication type:

Article

From Nonspecific DNA-Protein Encounter Complexes to the Prediction of DNA-Protein Interactions.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000341

By:

Mu Gao;
Skolnick, Jeffrey

Publication type:

Article

Natural Image Coding in V1: How Much Use Is Orientation Selectivity?

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000336

By:

Eichhorn, Jan;
Sinz, Fabian;
Bethge, Matthias

Publication type:

Article

Systems Analysis of Bioenergetics and Growth of the Extreme Halophile Halobacterium salinarum.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000332

By:

Gonzalez, Orland;
Gronau, Susanne;
Pfeiffer, Friedhelm;
Mendoza, Eduardo;
Zimmer, Ralf;
Oesterhelt, Dieter

Publication type:

Article