Works matching IS 1553734X AND DT 2007 AND VI 3 AND IP 11

Results: 33

An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e231, doi. 10.1371/journal.pcbi.0030231

By:

Poon, Art F. Y.;
Lewis, Fraser I.;
Pond, Sergei L. Kosakovsky;
Frost, Simon D. W.

Publication type:

Article

Intragenomic Matching Reveals a Huge Potential for miRNA-Mediated Regulation in Plants.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e238, doi. 10.1371/journal.pcbi.0030238

By:

Lindow, Morten;
Jacobsen, Anders;
Nygaard, Sanne;
Yuan Mang;
Krogh, Anders

Publication type:

Article

Phenotypic Mutation Rates and the Abundance of Abnormal Proteins in Yeast.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e203, doi. 10.1371/journal.pcbi.0030203

By:

Willensdorfer, Martin;
Bürger, Reinhard;
Nowak, Martin A

Publication type:

Article

Small Regulatory RNAs May Sharpen Spatial Expression Patterns.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e233, doi. 10.1371/journal.pcbi.0030233

By:

Levine, Erel;
McHale, Peter;
Levine, Herbert

Publication type:

Article

Retinal Wave Behavior through Activity- Dependent Refractory Periods.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e245, doi. 10.1371/journal.pcbi.0030245

By:

Godfrey, Keith B.;
Swindale, Nicholas V.

Publication type:

Article

Direct Inference of SNP Heterozygosity Rates and Resolution of LOH Detection.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e244, doi. 10.1371/journal.pcbi.0030244

By:

Xiaohong Li;
Self, Steven G.;
Galipeau, Patricia C.;
Paulson, Thomas G.;
Reid, Brian J.

Publication type:

Article

Gamma Oscillations of Spiking Neural Populations Enhance Signal Discrimination.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e236, doi. 10.1371/journal.pcbi.0030236

By:

Masuda, Naoki;
Doiron, Brent

Publication type:

Article

Predicting Gene Expression from Sequence: A Reexamination.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e243, doi. 10.1371/journal.pcbi.0030243

By:

Yuan Yuan;
Lei Guo;
Lei Shen;
Liu, Jun S.

Publication type:

Article

STDP in a Bistable Synapse Model Based on CaMKII and Associated Signaling Pathways.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e221, doi. 10.1371/journal.pcbi.0030221

By:

Graupner, Michael;
Brunel, Nicolas

Publication type:

Article

Predicting Protein Function with Hierarchical Phylogenetic Profiles: The Gene3D Phylo-Tuner Method Applied to Eukaryotic Genomes.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e237, doi. 10.1371/journal.pcbi.0030237

By:

Ranea, Juan A. G.;
Yeats, Corin;
Grant, Alastair;
Orengo, Christine A.

Publication type:

Article

A Universal Mechanism Ties Genotype to Phenotype in Trinucleotide Diseases.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e235, doi. 10.1371/journal.pcbi.0030235

By:

Kaplan, Shai;
Itzkovitz, Shalev;
Shapiro, Ehud

Publication type:

Article

A Dynamical Systems Hypothesis of Schizophrenia.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e228, doi. 10.1371/journal.pcbi.0030228

By:

Loh, Marco;
Rolls, Edmund T.;
Deco, Gustavo

Publication type:

Article

CATHEDRAL: A Fast and Effective Algorithm to Predict Folds and Domain Boundaries from Multidomain Protein Structures.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e232, doi. 10.1371/journal.pcbi.0030232

By:

Redfern, Oliver C.;
Harrison, Andrew;
Dallman, Tim;
Pearl, Frances M. G.;
Orengo, Christine A.

Publication type:

Article

In Silico Elucidation of the Molecular Mechanism Defining the Adverse Effect of Selective Estrogen Receptor Modulators.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e217, doi. 10.1371/journal.pcbi.0030217

By:

Lei Xie;
Jian Wang;
Bourne, Philip E.

Publication type:

Article

Molecular Basis for Evolving Modularity in the Yeast Protein Interaction Network.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e226, doi. 10.1371/journal.pcbi.0030226

By:

Fernández, Ariel

Publication type:

Article

Stochastic Noise and Synchronisation during Dictyostelium Aggregation Make cAMP Oscillations Robust.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e218, doi. 10.1371/journal.pcbi.0030218

By:

Kim, Jongrae;
Heslop-Harrison, Pat;
Postlethwaite, Ian;
Bates, Declan G.

Publication type:

Article

Genetic Progression and the Waiting Time to Cancer.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e225, doi. 10.1371/journal.pcbi.0030225

By:

Beerenwinkel, Niko;
Antal, Tibor;
Dingli, David;
Traulsen, Arne;
Kinzler, Kenneth W.;
Velculescu, Victor E.;
Vogelstein, Bert;
Nowak, Martin A.

Publication type:

Article

Using Likelihood-Free Inference to Compare Evolutionary Dynamics of the Protein Networks of H. pylori and P. falciparum.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e230, doi. 10.1371/journal.pcbi.0030230

By:

Ratmann, Oliver;
Jørgensen, Ole;
Hinkley, Trevor;
Stumpf, Michael;
Richardson, Sylvia;
Wiuf, Carsten

Publication type:

Article

Computational Analysis of Mouse piRNA Sequence and Biogenesis.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e222, doi. 10.1371/journal.pcbi.0030222

By:

Betel, Doron;
Sheridan, Robert;
Marks, Debora S.;
Sander, Chris

Publication type:

Article

A Nucleosome-Guided Map of Transcription Factor Binding Sites in Yeast.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e215, doi. 10.1371/journal.pcbi.0030215

By:

Narlikar, Leelavati;
Gordân, Raluca;
Hartemink, Alexander J.

Publication type:

Article

MORPH: Probabilistic Alignment Combined with Hidden Markov Models of cis-Regulatory Modules.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e216, doi. 10.1371/journal.pcbi.0030216

By:

Sinha, Saurabh;
Xin He

Publication type:

Article

Control of Membrane Fusion Mechanism by Lipid Composition: Predictions from Ensemble Molecular Dynamics.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e220, doi. 10.1371/journal.pcbi.0030220

By:

Kasson, Peter M.;
Pande, Vijay S.

Publication type:

Article

Where Have All the Interactions Gone? Estimating the Coverage of Two-Hybrid Protein Interaction Maps.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e214, doi. 10.1371/journal.pcbi.0030214

By:

Huang, Hailiang;
Jedynak, Bruno M;
Bader, Joel S

Publication type:

Article

From Endosymbiont to Host-Controlled Organelle: The Hijacking of Mitochondrial Protein Synthesis and Metabolism.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e219, doi. 10.1371/journal.pcbi.0030219

By:

Gabaldón, Toni;
Huynen, Martijn A.

Publication type:

Article

Self-organizing Mechanism for Development of Space-filling Neuronal Dendrites.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e212, doi. 10.1371/journal.pcbi.0030212

By:

Sugimura, Kaoru;
Shimono, Kohei;
Uemura, Tadashi;
Mochizuki, Atsushi

Publication type:

Article

Self-Assembly and DNA Binding of the Blocking Factor in X Chromosome Inactivation.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e210, doi. 10.1371/journal.pcbi.0030210

By:

Nicodemi, Mario;
Prisco, Antonella

Publication type:

Article

Are There Rearrangement Hotspots in the Human Genome?

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e209, doi. 10.1371/journal.pcbi.0030209

By:

Alekseyev, Max A.;
Pevzner, Pavel A.

Publication type:

Article

Meta-Analysis of Drosophila Circadian Microarray Studies Identifies a Novel Set of Rhythmically Expressed Genes.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e208, doi. 10.1371/journal.pcbi.0030208

By:

Keegan, Kevin P;
Pradhan, Suraj;
Wang, Ji-Ping;
Allada, Ravi

Publication type:

Article

Computational Biology in Cuba: An Opportunity to Promote Science in a Developing Country.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e227, doi. 10.1371/journal.pcbi.0030227

By:

Pons, Tirso;
Montero, Luis A.;
Febles, Juan P.

Publication type:

Article

Detecting Coevolution in and among Protein Domains.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e211, doi. 10.1371/journal.pcbi.0030211

By:

Yeang, Chen-Hsiang;
Haussler, David

Publication type:

Article

A Primer on Python for Life Science Researchers.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e199, doi. 10.1371/journal.pcbi.0030199

By:

Bassi, Sebastian

Publication type:

Article

Ten Simple Rules for Graduate Students.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e229, doi. 10.1371/journal.pcbi.0030229

By:

Gu, Jenny;
Bourne, Philip E.

Publication type:

Article

From Inverse Problems in Mathematical Physiology to Quantitative Differential Diagnoses.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 11, p. e204, doi. 10.1371/journal.pcbi.0030204

By:

Zenker, Sven;
Rubin, Jonathan;
Clermont, Gilles

Publication type:

Article