Works matching DE "GENE families"

Results: 5000

Protein sequence classification using natural language processing techniques.

Published in:

Discover Artificial Intelligence, 2025, v. 5, n. 1, p. 1, doi. 10.1007/s44163-025-00304-x

By:

Perveen, Huma;
Weeds, Julie

Publication type:

Article

Comparative transcriptomics reveals different profiles between diflubenzuron‐resistant and ‐susceptible phenotypes of the mosquito Culex pipiens.

Published in:

Pest Management Science, 2025, v. 81, n. 6, p. 3370, doi. 10.1002/ps.8710

By:

Valentina, Mastrantonio;
Franco, Liberati;
Tiziana, Castrignanò;
Valentina, Lucchesi;
Sandra, Urbanelli;
Romeo, Bellini;
John, Vontas;
Daniele, Porretta

Publication type:

Article

Genome-wide identification, molecular docking and expression analysis of enzymes involved in the primary and secondary metabolic branching points of the selenium metabolic pathway in Cardamine hupingshanensis.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06555-1

By:

Xu, Yue;
Gao, Lilong;
Liu, Jingyi;
Guan, Wenwu;
Xie, Jingyu;
Zeng, Xixi;
Chen, Yushan;
Lu, Yanke;
Hou, Zhi;
Xiang, Zhixin;
Zhou, Yifeng;
Tang, Qiaoyu

Publication type:

Article

Genome-wide identification, characterization, and expression analysis of the MADS-box gene family in grass pea (Lathyrus sativus) under salt stress conditions.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11661-3

By:

Abdelsattar, Mohamed;
Nassar, Ahmed E.;
Mousa, Khaled H.;
Hussein, Ahmed;
El-Baghdady, Manal M. S.;
Radwan, Khaled H.;
Ibrahim, Manar S.;
El Allali, Achraf;
Hamwieh, Aladdin;
Alsamman, Alsamman M.;
Kehel, Zakaria

Publication type:

Article

Topological data analysis captures horizontal gene transfer in antimicrobial resistance gene families among clinically relevant bacteria.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1461293

By:

Guerrero-Flores, Shaday;
Contreras-Peruyero, Haydeé;
Ibarra-Rodríguez, José María;
Lovaco-Flores, José Abel;
Nieto-de la Rosa, Francisco Santiago;
Fontove-Herrera, Fernando;
Sélem-Mojica, Nelly

Publication type:

Article

Evolution of NAC transcription factors from early land plants to domesticated crops Open Access.

Published in:

Plant & Cell Physiology, 2025, v. 66, n. 4, p. 566, doi. 10.1093/pcp/pcae133

By:

Kim, Taehoon;
Alvarez, Javier C;
Rana, Divya;
Preciado, Jesus;
Liu, Tie;
Begcy, Kevin

Publication type:

Article

谷子 LEA 基因家族全基因组鉴定及表达分析.

Published in:

Journal of Shanxi Agricultural Sciences, 2025, v. 53, n. 3, p. 16, doi. 10.3969/j.issn.1002-2481.2025.03.03

By:

宋梦瑶;
李娜;
秦家范;
郭冰;
李春霞;
李君霞;
马小倩

Publication type:

Article

Genome-wide analysis of AP2/ERF gene family and functional characterization of StoERF109 in Solanum torvum response to Verticillium dahliae infection.

Published in:

Planta: An International Journal of Plant Biology, 2025, v. 262, n. 1, p. 1, doi. 10.1007/s00425-025-04723-z

By:

Feng, Chang;
Dong, Ya-lun;
Shen, Lei

Publication type:

Article

Comprehensive profiling of Bcl-2-associated athanogene (BAG) genes and their genetic potential role under cold stress in Cotton.

Published in:

Functional & Integrative Genomics, 2025, v. 25, n. 1, p. 1, doi. 10.1007/s10142-025-01618-w

By:

Abro, Aamir Ali;
Sun, Cong;
Abbas, Mubashir;
Liu, Qiankun;
Jie, Zheng;
Xu, Yanchao;
Hou, Yuqing;
Zhou, Zhongli;
Iqbal, Rashid;
Liu, Fang;
Cai, Xiaoyan

Publication type:

Article

Chromosome-level draft genome assembly of Hypomesus nipponensis reveals transposable element expansion reshaping the genome structure.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1502681

By:

Zhu, Chenzhao;
Kuang, Youyi;
Li, Zhe;
Tang, Fujiang

Publication type:

Article

Bioinformatics analysis of the tomato (Solanum lycopersicum) methylesterase gene family.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06625-4

By:

Shang, Jing;
Li, Fujun;
Kong, Xiangrong;
Ji, Yue;
Li, Yanan;
Hussain, Sarfaraz;
Li, Xiaoan;
Li, Ling;
Zhang, Xinhua;
Ahmed, Zienab F. R.

Publication type:

Article

Identification and expression analysis of PAL genes related to chlorogenic acid synthesis in Vaccinium dunalianum Wight.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1544303

By:

An, Xiuhua;
Li, Guoze;
Chen, Aiyi;
Zhao, Ping;
Ding, Yong

Publication type:

Article

Genome-wide identification, tissue expression pattern, and salt stress response analysis of the NAC gene family in Thinopyrum elongatum.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06696-3

By:

Sun, Jilin;
Cui, Xiaokuo;
Zhang, Jiaqi;
Meng, Fansen;
Li, Jiangong;
Zhou, Shenghui;
Wu, Changai;
Zhou, Peng;
Sun, Silong;
Han, Long

Publication type:

Article

Characterization and expression of the wall-associated kinase/wall-associated kinase-like (WAK/WAKL) family in response to Botrytis cinerea infection in strawberry (Fragaria×ananassa).

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06405-0

By:

Xu, Chenyang;
He, Zhimin;
Kang, Xiaoru;
Zhao, Yanwei;
Peng, Qingqing;
Wen, Min;
Yan, Jiaqi

Publication type:

Article

Integrating genome and transcriptome-wide data to explore the expression dynamics of TCP genes in Pisum sativum under salt stress.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1580890

By:

Fangyuan, Song;
Yong, Li;
Huang, Jin;
Zhiyue, Guo;
Wen, Deng

Publication type:

Article

Genomic structure of yellow lupin (Lupinus luteus): genome organization, evolution, gene family expansion, metabolites and protein synthesis.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11678-8

By:

Martinez-Hernandez, J. Eduardo;
Salvo-Garrido, Haroldo;
Levicoy, Daniela;
Caligari, Peter D. S.;
Rupayán, Annally;
Moyano, Tomas;
Carrasco, Makarena;
Hernandez, Sebastián;
Armijo-Godoy, Grace;
Westermeyer, Fernando;
Larama, Giovanni

Publication type:

Article

The first chromosome-scale genome assembly of a microcyclic rust, Puccinia silphii.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11593-y

By:

de Mattos, Jacqueline S.;
Keepers, Kyle;
Innes, Peter A.;
de Mesquita, Clifton P. Bueno;
Quandt, C. Alisha;
Kane, Nolan C.;
Brandvain, Yaniv;
Turner, Kathryn

Publication type:

Article

Molecular Links Between Circadian Rhythm Disruption, Melatonin, and Neurodegenerative Diseases: An Updated Review.

Published in:

Molecules, 2025, v. 30, n. 9, p. 1888, doi. 10.3390/molecules30091888

By:

Baser, Kemal Hüsnü Can;
Haskologlu, Ismail Celil;
Erdag, Emine

Publication type:

Article

Genome-wide identification of GmEDS1 gene family members in soybean and expression analysis in response to biotic and abiotic stresses.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1554399

By:

Liu, Zhixian;
Yang, Jiahui;
Yan, Ziyu;
Huang, Lexiang;
Xing, Chengshun;
Zhao, Miaoyu;
Du, Haiping;
He, Milan;
Kong, Fanjiang;
Liu, Baohui;
Zhao, Xiaohui

Publication type:

Article

Evidence for Pituitary Repression of the Human Growth Hormone-Related Placental Lactogen Genes and a Role for P Sequences.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4421, doi. 10.3390/ijms26094421

By:

Cattini, Peter A.;
Jin, Yan

Publication type:

Article

Unraveling the COVID-19 Severity Hubs and Interplays in Inflammatory-Related RNA–Protein Networks.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4412, doi. 10.3390/ijms26094412

By:

Park, Heewon;
Wang, Qingbo S.;
Hasegawa, Takanori;
Namkoong, Ho;
Tanaka, Hiroko;
Koike, Ryuji;
Kitagawa, Yuko;
Kimura, Akinori;
Imoto, Seiya;
Kanai, Takanori;
Fukunaga, Koichi;
Ogawa, Seishi;
Okada, Yukinori;
Miyano, Satoru

Publication type:

Article

Identification and Functional Exploration of the ALKBH Gene Family in Oriental Melon Fruit Ripening.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4254, doi. 10.3390/ijms26094254

By:

Zhang, Chong;
Guo, Xinqi;
Zhang, Ying;
Pang, Hongbo;
Chen, Qiang

Publication type:

Article

A Novel Homozygous 9385 bp Deletion in the FERMT1 (KIND1) Gene in a Malaysian Family with Kindler Epidermolysis bullosa and a Review of Large Deletions.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4237, doi. 10.3390/ijms26094237

By:

Klausegger, Alfred;
Leditzky, Fabian;
Krämer, Susanne;
Palisson, Francis;
Yubero, María Joao;
Véliz, Sebastián;
Koh, Mark Jean Aan;
Tan, Ene-Choo;
Laimer, Martin;
Bauer, Johann Wolfgang;
Fuentes, Ignacia

Publication type:

Article

Genome-Wide Analysis of the MsRCI2 Gene Family in Medicago sativa and Functional Characterization of MsRCI2B in Salt Tolerance.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4165, doi. 10.3390/ijms26094165

By:

Qiao, Huiru;
Zhang, Depeng;
Zhang, Zizhao;
Meng, Jing;
He, Pin;
Zhang, Shichao;
Wang, Yan;
Cai, Hua;
Li, Yong

Publication type:

Article

Genome-Wide Identification and Classification of Arabinogalactan Proteins Gene Family in Gossypium Species and GhAGP50 Increases Numbers of Epidermal Hairs in Arabidopsis.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4159, doi. 10.3390/ijms26094159

By:

Wei, Renhui;
Guo, Ziru;
Yang, Zheng;
Zhao, Yanpeng;
Yan, Haoliang;
Azhar, Muhammad Tehseen;
Zhang, Yamin;
Li, Gangling;
Pan, Jingtao;
Liu, Aiying;
Gong, Wankui;
Ge, Qun;
Gong, Juwu;
Yuan, Youlu;
Shang, Haihong

Publication type:

Article

The Role of ESS2/DGCR14: Is It an Essential Factor in Splicing and Transcription?

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4056, doi. 10.3390/ijms26094056

By:

Takada, Ichiro;
Hidano, Shinya;
Nakagawa, Tohru;
Nakagawa, Shinichi;
Makishima, Makoto;
Takahashi, Sayuri

Publication type:

Article

Genome-Wide Identification and Functional Analysis of C2H2 Zinc Finger Transcription Factor Genes in the Intertidal Macroalga Pyropia haitanensis.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4042, doi. 10.3390/ijms26094042

By:

Xie, Jiajia;
Ji, Dehua;
Xu, Yan;
Xu, Kai;
Xie, Chaotian;
Wang, Wenlei

Publication type:

Article

Comprehensive Characterization and Functional Analysis of the Lateral Organ Boundaries Domain Gene Family in Rice: Evolution, Expression, and Stress Response.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 3948, doi. 10.3390/ijms26093948

By:

Sun, Shang;
Yi, Jingjing;
Gu, Peiling;
Huang, Yongtian;
Huang, Xin;
Li, Hanqing;
Fan, Tingting;
Zhao, Jing;
Wang, Ruozhong;
Gaballah, Mahmoud Mohamed;
Xiao, Langtao;
Li, Haiou

Publication type:

Article

Genome-Wide Characterization, Comparative Analysis, and Expression Profiling of SWEET Genes Family in Four Cymbidium Species (Orchidaceae).

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 3946, doi. 10.3390/ijms26093946

By:

Wei, Yonglu;
Li, Jie;
Jin, Jianpeng;
Gao, Jie;
Xie, Qi;
Lu, Chuqiao;
Zhu, Genfa;
Yang, Fengxi

Publication type:

Article

Genome-wide identification and expression analysis of TCP transcription factors in Chrysanthemum indicum reveals their critical role in the response to various abiotic stresses.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06521-x

By:

Chen, Shengyan;
Chen, Bin;
Xu, Xingnong

Publication type:

Article

Assessing Functional Conservation Amongst FT - and TFL1 -like Genes in Globe Artichoke.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1364, doi. 10.3390/plants14091364

By:

Berentsen, Rick;
Domenech, María José;
Visser, Peter;
Madueño, Francisco;
Balanzà, Vicente;
Benlloch, Reyes

Publication type:

Article

Identification of the Plant Defensin (MsPDF) Gene Family in Medicago sativa and Analysis of Expression Patterns Under Abiotic Stress.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1312, doi. 10.3390/plants14091312

By:

Guo, Meiyan;
Chen, Xiuhua;
Li, Shuaixian;
Tian, Jiang;
Huang, Wangqi;
Shu, Yongjun

Publication type:

Article

Genome-Wide Identification of ATL Gene Family in Wheat and Their Expression Analysis in Response to Salt Stress.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1306, doi. 10.3390/plants14091306

By:

Li, Xuqing;
Liu, Shuotong;
Yu, Pei

Publication type:

Article

Characterization of 4-Coumarate-CoA Ligase (4CL) Genes in Wheat Uncovers Ta4CL91 's Role in Drought and Salt Stress Adaptation.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1301, doi. 10.3390/plants14091301

By:

Zhang, Ze;
Yang, Xiuli;
Ning, Dongxian;
Li, Rong

Publication type:

Article

Genome-Wide Analyses and Expression Profiling of PME / PMEI Gene Families Reveal Their Relevance to Chilling Stress Response and Grafted Healing Efficiency in Cucumber/Pumpkin-Grafted Plants.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1294, doi. 10.3390/plants14091294

By:

Lin, Huangfang;
Ye, Huilan;
Shao, Qingqing;
Cheng, Saichuan;
Bi, Ge;
Lin, Biying;
Lin, Honghui;
He, Lei;
Shen, Baoying;
Zhu, Haisheng;
Wen, Qingfang;
Liu, Shuang;
Chen, Qingqing

Publication type:

Article

Genome-Wide Analysis of GRETCHEN HAGEN3 Genes and Characterization of IAA-Amido Synthetase Gene CsGH3.1 in Rhizome Proliferation in Cymbidium sinense 'Qijianbaimo'.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1287, doi. 10.3390/plants14091287

By:

Jia, Sisi;
Liu, Cuiling;
Liao, Chushu;
Zeng, Ruizhen;
Xie, Li;
Wei, Qian;
Zhang, Zhisheng

Publication type:

Article

A Comparative Transcriptomic Analysis of miRNAs and Their Target Genes During the Formation of Melanin in Apis mellifera.

Published in:

Agriculture; Basel, 2025, v. 15, n. 9, p. 992, doi. 10.3390/agriculture15090992

By:

Zhu, Xiangjie;
Tian, Yuanmingyue;
Cao, Mingjie;
Zhu, Chenyu;
Shang, Jiaqi;
Sun, Jiaqi;
Liu, Yiming;
Zhou, Bingfeng;
Zhou, Shujing;
Xu, Xinjian

Publication type:

Article

Chromosome-level genome assembly reveals adaptive evolution of the invasive Amazon sailfin catfish (Pterygoplichthys pardalis).

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08029-4

By:

Lv, Yunyun;
Li, Yanping;
Fang, Miao;
Liu, Yi;
Wang, Yuanyuan;
Yang, Yexin;
Zou, Yuanchao;
Shi, Qiong;
Mu, Xidong

Publication type:

Article

QRICH1 regulates ATF6 transcription to affect pathological cardiac hypertrophy progression.

Published in:

Molecular Medicine, 2025, v. 31, n. 1, p. 1, doi. 10.1186/s10020-025-01241-2

By:

Zhang, Lihui;
Chen, Hongping;
Zou, Guangmei;
Jia, Wenjuan;
Dong, Haibin;
Wang, Chunxiao;
Wang, Hua;
Liu, Yugang;
Teng, Da;
Xu, Bowen;
Zhong, Lin;
Gong, Lei;
Yang, Jun

Publication type:

Article

Whole-genome identification of HSF family genes in Cerasus humilis and expression analysis under high-temperature stress.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1553187

By:

Mu, Xiaopeng;
Zhang, Jiating;
Wang, Chenyi;
Chen, Liming;
Zhang, Jianying;
Wang, Pengfei;
Zhang, Jiancheng;
Zhang, Bin;
Du, Junjie

Publication type:

Article

Identification of DREB gene family in foxtail millet (Setaria italica) and analysis of its expression pattern in response to abiotic stress.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1552120

By:

Yang, Yanan;
Li, Yun;
Guo, Zhenqing;
Zhao, Yuxue;
Zhou, Xiaoke;
Han, Yucui;
Lin, Xiaohu

Publication type:

Article

The CaSBP11 gene functions as a negative regulator in pepper drought stress.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1497425

By:

Zhang, Huai-Xia;
Zhang, Yuan;
Zhang, Bo-Wen;
Pan, Fei-Fei

Publication type:

Article

Transcriptome analysis and genome-wide identification of WRKY gene family in Leonurus japonicus under drought stress.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06606-7

By:

Guo, Tongtong;
Wang, Qing;
Yi, Yuxiao;
Yin, Zelin;
Xu, Lili;
Yang, Fengtang;
Xu, Jianing;
Zhang, Ming

Publication type:

Article

Genome-wide identification, phylogenetic investigation and abiotic stress responses analysis of the PP2C gene family in litchi (Litchi chinensis Sonn.).

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1547526

By:

Yang, Jie;
Chen, Rong;
Liu, Wei;
Fan, Chao

Publication type:

Article

Rice grain size: current regulatory mechanisms and future perspectives.

Published in:

Journal of Plant Research, 2025, v. 138, n. 3, p. 403, doi. 10.1007/s10265-025-01626-8

By:

Yaseen, Muhammad;
Tariq, Naveed;
Kanwal, Rida;
Farooq, Akasha;
Wang, Hao;
Yuan, Hua

Publication type:

Article

Investigation of the Nucleotide Sequence Variations of Genes mazE and mazF in Escherichia coli Bacteria Isolated from Clinical Sources.

Published in:

Tropical Journal of Natural Product Research, 2025, v. 9, n. 4, p. 1471, doi. 10.26538/tjnpr/v9i4.13

By:

Shehab, Zina H.;
Al-Shimmary, Sana M. H.;
Ahmed, Shatha T.;
Jabur, Zahraa A.

Publication type:

Article

Identification of MsCYP79 and MsCYP83 gene families and its response to mechanical damage in Medicago sativa L.

Published in:

PLoS ONE, 2025, v. 20, n. 5, p. 1, doi. 10.1371/journal.pone.0322981

By:

Wu, Fang;
Zhang, Jing;
Yang, Hongshan;
Duan, Huirong

Publication type:

Article

Transcriptomic analysis of the TRP gene family in human brain physiopathology.

Published in:

Frontiers in Molecular Neuroscience, 2025, p. 1, doi. 10.3389/fnmol.2025.1576941

By:

Olejniczak, Barbara;
Balakrishnan, Arpita;
Augustyniak, Justyna;
Salińska, Elżbieta;
Bronisz, Agnieszka;
Godlewski, Jakub

Publication type:

Article

The tree of life of copper-containing amine oxidases.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1544527

By:

Zhang, Zaibao;
Xiong, Tao;
Li, Kejia;
Huang, Kexin;
Wu, Siyu;
Wu, Luhui

Publication type:

Article

Identification and characterization of Csa-miR159s and their expression patterns under different abiotic stresses in cucumber (Cucumis sativus L.).

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1518406

By:

Zhao, Zhenxiang;
Ao, Wenhong;
Luo, Weirong;
Sun, Yaoguang;
Tokala, Vijay Yadav;
Liu, Junjun;
Zhi, Shenshen;
Sun, Yongdong

Publication type:

Article