Works matching DE "SHOTGUN sequencing"
Results: 1675
Effect of salinity on genes involved in the stress response in mangrove soils.
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- Antonie van Leeuwenhoek, 2023, v. 116, n. 11, p. 1171, doi. 10.1007/s10482-023-01856-7
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- Article
Genomic potential for exopolysaccharide production and differential polysaccharide degradation in closely related Alteromonas sp. PRIM-21 and Alteromonas fortis 1<sup>T</sup>.
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- Antonie van Leeuwenhoek, 2023, v. 116, n. 1, p. 39, doi. 10.1007/s10482-022-01796-8
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- Article
Description of 'Ca. Methylobacter oryzae' KRF1, a novel species from the environmentally important Methylobacter clade 2.
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- Antonie van Leeuwenhoek, 2020, v. 113, n. 5, p. 729, doi. 10.1007/s10482-019-01369-2
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- Article
Characterization of mRNA therapeutics.
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- Mass Spectrometry Reviews, 2024, v. 43, n. 5, p. 1066, doi. 10.1002/mas.21856
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- Article
The Characteristics of Gut Microbiota and Its Relation with Diet in Postmenopausal Osteoporosis.
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- Calcified Tissue International, 2024, v. 115, n. 4, p. 393, doi. 10.1007/s00223-024-01260-x
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- Article
Long-Term Outdoor Cultivation of Nannochloropsis in California, Hawaii, and New Mexico.
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- Data (2306-5729), 2024, v. 9, n. 11, p. 126, doi. 10.3390/data9110126
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- Article
Characterization of microbial communities in ethanol biorefineries.
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- Journal of Industrial Microbiology & Biotechnology, 2020, v. 47, n. 2, p. 183, doi. 10.1007/s10295-019-02254-7
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- Article
Effect of temperature on methane oxidation and community composition in landfill cover soil.
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- Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 9/10, p. 1283, doi. 10.1007/s10295-019-02217-y
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- Article
Meta-analysis of shotgun sequencing of gut microbiota in Parkinson's disease.
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- NPJ Parkinson's Disease, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41531-024-00724-z
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- Article
The genome assembly of asparagus bean, Vigna unguiculata ssp. sesquipedialis.
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- Scientific Data, 2019, v. 6, n. 1, p. N.PAG, doi. 10.1038/s41597-019-0130-6
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- Article
Insights into the Microbiome and Antibiotic Resistance Genes from Hospital Environmental Surfaces: A Prime Source of Antimicrobial Resistance.
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- Antibiotics (2079-6382), 2024, v. 13, n. 2, p. 127, doi. 10.3390/antibiotics13020127
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- Article
Shotgun Metagenomics-Guided Prediction Reveals the Metal Tolerance and Antibiotic Resistance of Microbes in Poly-Extreme Environments in the Danakil Depression, Afar Region.
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- Antibiotics (2079-6382), 2023, v. 12, n. 12, p. 1697, doi. 10.3390/antibiotics12121697
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- Article
Comparison of Oral Microbial Composition and Determinants Encoding Antimicrobial Resistance in Dogs and Their Owners.
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- Antibiotics (2079-6382), 2023, v. 12, n. 10, p. 1554, doi. 10.3390/antibiotics12101554
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- Article
Short-Term Impact of Oxytetracycline Administration on the Fecal Microbiome, Resistome and Virulome of Grazing Cattle.
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- Antibiotics (2079-6382), 2023, v. 12, n. 3, p. 470, doi. 10.3390/antibiotics12030470
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- Article
Relationship between Phenotypic and Genotypic Resistance of Subgingival Biofilm Samples in Patients with Periodontitis.
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- Antibiotics (2079-6382), 2023, v. 12, n. 1, p. 68, doi. 10.3390/antibiotics12010068
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- Article
Risk Factors for Antimicrobial Resistance in Turkey Farms: A Cross-Sectional Study in Three European Countries.
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- Antibiotics (2079-6382), 2021, v. 10, n. 7, p. 820, doi. 10.3390/antibiotics10070820
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- Article
Identification and Rational Design of a Novel Antibacterial Peptide Dermaseptin-AC from the Skin Secretion of the Red-Eyed Tree Frog Agalychnis callidryas.
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- Antibiotics (2079-6382), 2020, v. 9, n. 5, p. 243, doi. 10.3390/antibiotics9050243
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- Article
Effects of Environmental Chemical Pollutants on Microbiome Diversity: Insights from Shotgun Metagenomics.
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- Toxics, 2025, v. 13, n. 2, p. 142, doi. 10.3390/toxics13020142
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- Article
ERRATUM TO: Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approaches.
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- Italian Journal of Food Safety, 2020, v. 9, n. 1, p. 79, doi. 10.4081/ijfs.2020.8991
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- Article
Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approaches.
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- Italian Journal of Food Safety, 2019, v. 8, n. 4, p. 205, doi. 10.4081/ijfs.2019.8462
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- Article
A novel thermophilic chitinase directly mined from the marine metagenome using the deep learning tool Preoptem.
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- Bioresources & Bioprocessing, 2022, v. 9, n. 1, p. 1, doi. 10.1186/s40643-022-00543-1
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- Article
Effects of cadmium perturbation on the microbial community structure and heavy metal resistome of a tropical agricultural soil.
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- Bioresources & Bioprocessing, 2020, v. 7, n. 1, p. 1, doi. 10.1186/s40643-020-00314-w
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- Article
Novel Transaminase and Laccase from Streptomyces spp. Using Combined Identification Approaches.
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- Catalysts (2073-4344), 2021, v. 11, n. 8, p. 919, doi. 10.3390/catal11080919
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- Article
Metagenomic Insights into Microbial Signatures in Thrombi from Acute Ischemic Stroke Patients Undergoing Endovascular Treatment.
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- Brain Sciences (2076-3425), 2025, v. 15, n. 2, p. 157, doi. 10.3390/brainsci15020157
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- Article
Metagenomic Shotgun Sequencing Reveals Specific Human Gut Microbiota Associated with Insulin Resistance and Body Fat Distribution in Saudi Women.
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- Biomolecules (2218-273X), 2023, v. 13, n. 4, p. 640, doi. 10.3390/biom13040640
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- Article
Emergent Role of IFITM1/3 towards Splicing Factor (SRSF1) and Antigen-Presenting Molecule (HLA-B) in Cervical Cancer.
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- Biomolecules (2218-273X), 2022, v. 12, n. 8, p. 1090, doi. 10.3390/biom12081090
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- Article
Predictive medicine in a testis trio‐family through a combined multi‐omics approach.
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- Clinical & Translational Medicine, 2024, v. 14, n. 4, p. 1, doi. 10.1002/ctm2.1643
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- Article
A Bioinformatics Guide to Plant Microbiome Analysis.
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- Frontiers in Plant Science, 2019, v. 10, p. 1, doi. 10.3389/fpls.2019.01313
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- Article
Predictors based on cuproptosis closely related to angiogenesis predict colorectal cancer recurrence.
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- Frontiers in Oncology, 2024, p. 1, doi. 10.3389/fonc.2023.1322421
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- Article
Circulating tumour DNA as biomarker for rectal cancer: A systematic review and meta-analyses.
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- Frontiers in Oncology, 2023, v. 13, p. 1, doi. 10.3389/fonc.2023.1083285
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- Article
A clinical prognostic model for patients with esophageal squamous cell carcinoma based on circulating tumor DNA mutation features.
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- Frontiers in Oncology, 2023, v. 13, p. 1, doi. 10.3389/fonc.2022.1025284
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- Article
Disturbed microbiotametabolites-immune interaction network is associated with olfactory dysfunction in patients with chronic rhinosinusitis.
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- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1159112
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- Article
Metagenomic shotgun sequencing and metabolomic profiling identify specific human gut microbiota associated with diabetic retinopathy in patients with type 2 diabetes.
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- Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.943325
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- Article
First Draft Genome Assembly of Redlip Mullet (Liza haematocheila) From Family Mugilidae.
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- Frontiers in Genetics, 2019, v. 10, p. 1, doi. 10.3389/fgene.2019.01246
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- Article
Review, Evaluation, and Directions for Gene-Targeted Assembly for Ecological Analyses of Metagenomes.
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- Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00957
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- Article
Advances and Challenges in Metatranscriptomic Analysis.
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- Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00904
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- Article
Chromosome-Level Assembly of the Chinese Seabass (Lateolabrax maculatus) Genome.
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- Frontiers in Genetics, 2019, p. N.PAG, doi. 10.3389/fgene.2019.00275
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- Article
Oral and gastric microbiome in relation to gastric intestinal metaplasia.
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- International Journal of Cancer, 2022, v. 150, n. 6, p. 928, doi. 10.1002/ijc.33848
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- Article
Detailed mapping of Bifidobacterium strain transmission from mother to infant via a dual culture-based and metagenomic approach.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38694-0
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- Article
Marine ecosystem shifts with deglacial sea-ice loss inferred from ancient DNA shotgun sequencing.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36845-x
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- Article
Clinical NEC prevention practices drive different microbiome profiles and functional responses in the preterm intestine.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36825-1
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- Article
Metagenomics of Parkinson's disease implicates the gut microbiome in multiple disease mechanisms.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34667-x
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- Article
HiFi metagenomic sequencing enables assembly of accurate and complete genomes from human gut microbiota.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34149-0
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- Article
Genome-centric analysis of short and long read metagenomes reveals uncharacterized microbiome diversity in Southeast Asians.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33782-z
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- Article
Telomere-to-telomere genome sequence of the model mould pathogen Aspergillus fumigatus.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32924-7
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- Article
Dissecting the role of the human microbiome in COVID-19 via metagenome-assembled genomes.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32991-w
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- Article
A compendium of 32,277 metagenome-assembled genomes and over 80 million genes from the early-life human gut microbiome.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32805-z
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- Article
Elucidation of intragenomic variation of ribosomal DNA sequences in the enigmatic fungal genus Ceraceosorus, including a newly described species Ceraceosorus americanus.
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- IMA Fungus, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s43008-024-00172-7
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- Article
Endovascular treatment of penetrating vascular injuries.
- Published in:
- 2021
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- Publication type:
- Case Study
Shotgun Metagenomic Sequencing Reveals Virome Composition of Mosquitoes from a Transition Ecosystem of North-Northeast Brazil.
- Published in:
- Genes, 2023, v. 14, n. 7, p. 1443, doi. 10.3390/genes14071443
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- Publication type:
- Article