Results: 257
A consortia of clinical E. coli strains with distinct in vitro adherent/invasive properties establish their own co-colonization niche and shape the intestinal microbiota in inflammation-susceptible mice.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01710-y
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- Publication type:
- Article
Phylogenetic diversity of functional genes in deep-sea cold seeps: a novel perspective on metagenomics.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01723-7
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- Article
Shotgun metagenomics reveals interkingdom association between intestinal bacteria and fungi involving competition for nutrients.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01693-w
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- Article
Gut microbiota-related metabolite alpha-linolenic acid mitigates intestinal inflammation induced by oral infection with Toxoplasma gondii.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01681-0
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- Article
Application of culturomics in fungal isolation from mangrove sediments.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01708-6
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- Article
Strategies of chemolithoautotrophs adapting to high temperature and extremely acidic conditions in a shallow hydrothermal ecosystem.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01712-w
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- Article
Supergroup F Wolbachia with extremely reduced genome: transition to obligate insect symbionts.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01462-9
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- Article
Core gut microbes Cloacibacterium and Aeromonas associated with different gastropod species could be persistently transmitted across multiple generations.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01700-0
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- Publication type:
- Article
Vitamin D modulation of brain-gut-virome disorder caused by polystyrene nanoplastics exposure in zebrafish (Danio rerio).
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01680-1
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- Article
Gut microbiota-bile acid crosstalk regulates murine lipid metabolism via the intestinal FXR-FGF19 axis in diet-induced humanized dyslipidemia.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01709-5
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- Publication type:
- Article
Host species and habitat shape fish-associated bacterial communities: phylosymbiosis between fish and their microbiome.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01697-6
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- Publication type:
- Article
Sequential host-bacteria and bacteria-bacteria interactions determine the microbiome establishment of Nematostella vectensis.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01701-z
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- Publication type:
- Article
Multi-site microbiota alteration is a hallmark of kidney stone formation.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01703-x
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- Article
Clec7a drives gut fungus-mediated host lipid deposition.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01698-5
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- Publication type:
- Article
Tree and shrub richness modifies subtropical tree productivity by regulating the diversity and community composition of soil bacteria and archaea.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01676-x
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- Article
Interplay of gut microbiota and host epithelial mitochondrial dysfunction is necessary for the development of spontaneous intestinal inflammation in mice.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01686-9
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- Publication type:
- Article
Metagenome-assembled genomes reveal greatly expanded taxonomic and functional diversification of the abundant marine Roseobacter RCA cluster.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01644-5
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- Publication type:
- Article
Newly isolated Lactobacillus paracasei strain modulates lung immunity and improves the capacity to cope with influenza virus infection.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01687-8
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- Publication type:
- Article
Gut microbiota response to in vitro transit time variation is mediated by microbial growth rates, nutrient use efficiency and adaptation to in vivo transit time.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01691-y
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- Publication type:
- Article
VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01705-9
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- Publication type:
- Article
Different roles of host and habitat in determining the microbial communities of plant-feeding true bugs.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01702-y
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- Publication type:
- Article
Mosaic environment-driven evolution of the deep-sea mussel Gigantidas platifrons bacterial endosymbiont.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01695-8
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- Article
Maternal microbiota communicates with the fetus through microbiota-derived extracellular vesicles.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01694-9
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- Article
Bacterial quorum sensing orchestrates longitudinal interactions to shape microbiota assembly.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01699-4
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- Article
Uterine microbial communities and their potential role in the regulation of epithelium cell cycle and apoptosis in aged hens.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01707-7
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- Publication type:
- Article
Cross-alteration of murine skin and tick microbiome concomitant with pathogen transmission after Ixodes ricinus bite.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01696-7
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- Publication type:
- Article
Anti-diarrheal drug loperamide induces dysbiosis in zebrafish microbiota via bacterial inhibition.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01690-z
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- Publication type:
- Article
Microbiota-indole 3-propionic acid-brain axis mediates abnormal synaptic pruning of hippocampal microglia and susceptibility to ASD in IUGR offspring.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01656-1
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- Article
Correction: Effects of melatonin on rumen microorganisms and methane production in dairy cow: results from in vitro and in vivo studies.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01706-8
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- Publication type:
- Article
Surgery-induced gut microbial dysbiosis promotes cognitive impairment via regulation of intestinal function and the metabolite palmitic amide.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01689-6
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- Publication type:
- Article
Tillandsia landbeckii phyllosphere and laimosphere as refugia for bacterial life in a hyperarid desert environment.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01684-x
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- Publication type:
- Article
decOM: similarity-based microbial source tracking of ancient oral samples using k-mer-based methods.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01670-3
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- Publication type:
- Article
Effects of melatonin on rumen microorganisms and methane production in dairy cow: results from in vitro and in vivo studies.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01620-z
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- Publication type:
- Article
Interplay between autotrophic and heterotrophic prokaryotic metabolism in the bathypelagic realm revealed by metatranscriptomic analyses.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01688-7
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- Publication type:
- Article
Revealing the developmental characterization of rumen microbiome and its host in newly received cattle during receiving period contributes to formulating precise nutritional strategies.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01682-z
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- Publication type:
- Article
Microbial hitchhikers harbouring antimicrobial-resistance genes in the riverine plastisphere.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01662-3
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- Publication type:
- Article
Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01666-z
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- Publication type:
- Article
Integrated multi-omics analysis reveals the positive leverage of citrus flavonoids on hindgut microbiota and host homeostasis by modulating sphingolipid metabolism in mid-lactation dairy cows consuming a high-starch diet.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01661-4
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- Publication type:
- Article
Pet cats may shape the antibiotic resistome of their owner's gut and living environment.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01679-8
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- Publication type:
- Article
Secretory IgA impacts the microbiota density in the human nose.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01675-y
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- Publication type:
- Article
Global diversity and biogeography of DNA viral communities in activated sludge systems.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01672-1
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- Publication type:
- Article
A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01671-2
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- Publication type:
- Article
Four functional profiles for fibre and mucin metabolism in the human gut microbiome.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01667-y
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- Publication type:
- Article
Gut bacterial consortium enriched in a biofloc system protects shrimp against Vibrio parahaemolyticus infection.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01663-2
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- Publication type:
- Article
Radiation impacts gene redundancy and biofilm regulation of cryoconite microbiomes in Northern Hemisphere glaciers.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01621-y
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- Publication type:
- Article
Novel methodologies for host-microbe interactions and microbiome-targeted therapeutics in 3D organotypic skin models.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01668-x
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- Publication type:
- Article
Antimicrobial peptides modulate lung injury by altering the intestinal microbiota.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01673-0
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- Publication type:
- Article
Coexistence of specialist and generalist species within mixed plastic derivative-utilizing microbial communities.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01645-4
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- Publication type:
- Article
MGS2AMR: a gene-centric mining of metagenomic sequencing data for pathogens and their antimicrobial resistance profile.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01674-z
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- Publication type:
- Article
Relative abundance data can misrepresent heritability of the microbiome.
- Published in:
- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01669-w
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- Publication type:
- Article