Works matching IS 20492618 AND DT 2015 AND VI 3

Results: 79

A simple novel device for air sampling by electrokinetic capture.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0141-2

By:

Gordon, Julian;
Gandhi, Prasanthi;
Shekhawat, Gajendra;
Frazier, Angel;
Hampton-Marcell, Jarrad;
Gilbert, Jack A.

Publication type:

Article

Sources of airborne microorganisms in the built environment.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0144-z

By:

Prussin II, Aaron J.;
Marr, Linsey C.

Publication type:

Article

The Tasmanian devil microbiome--implications for conservation and management.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0143-0

By:

Yuanyuan Cheng;
Fox, Samantha;
Pemberton, David;
Hogg, Carolyn;
Papenfuss, Anthony T.;
Belov, Katherine

Publication type:

Article

Erratum to: Type 2 immunity-dependent reduction of segmented filamentous bacteria in mice infected with the helminthic parasite Nippostrongylus brasiliensis.

Published in:: Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0142-1
Publication type:: Article

Potential association of vacuum cleaning frequency with an altered gut microbiota in pregnant women and their 2-year-old children.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0125-2

By:

Avershina, Ekaterina;
Anuradha Ravi;
Storrø, Ola;
Øien, Torbjørn;
Johnsen, Roar;
Rudi, Knut

Publication type:

Article

Protein relative abundance patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0136-z

By:

Rudney, Joel D.;
Jagtap, Pratik D.;
Reilly, Cavan S.;
Ruoqiong Chen;
Markowski, Todd W.;
Higgins, LeeAnn;
Johnson, James E.;
Griffin, Timothy J.

Publication type:

Article

Optimal screening and donor management in a public stool bank.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0140-3

By:

Kazerouni, Abbas;
Burgess, James;
Burns, Laura J.;
Wein, Lawrence M.

Publication type:

Article

The microbiome of the built environment and mental health.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0127-0

By:

Hoisington, Andrew J.;
Brenner, Lisa A.;
Kinney, Kerry A.;
Postolache, Teodor T.;
Lowry, Christopher A.

Publication type:

Article

The administration of intranasal live attenuated influenza vaccine induces changes in the nasal microbiota and nasal epithelium gene expression profiles.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0133-2

By:

Tarabichi, Y.;
Li, K.;
Hu, S.;
Nguyen, C.;
Wang, X.;
Elashoff, D.;
Saira, K.;
Frank, Bryan;
Bihan, Monika;
Ghedin, E.;
Methé, Barbara A.;
Deng, Jane C.

Publication type:

Article

A metagenomic approach from aphid's hemolymph sheds light on the potential roles of co-existing endosymbionts.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0130-5

By:

De Clerck, Caroline;
Fujiwara, Akiko;
Joncour, Pauline;
Léonard, Simon;
Félix, Marie-Line;
Francis, Frédéric;
Jijakli, M. Haissam;
Tsuchida, Tsutomu;
Massart, Sébastien

Publication type:

Article

Self-tracking the microbiome: where do we go from here?

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0138-x

By:

Gimbert, Carine;
Lapointe, François-Joseph

Publication type:

Article

Relative and contextual contribution of different sources to the composition and abundance of indoor air bacteria in residences.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0128-z

By:

Miletto, Marzia;
Lindow, Steven E.

Publication type:

Article

Simultaneous fecal microbial and metabolite profiling enables accurate classification of pediatric irritable bowel syndrome.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0139-9

By:

Shankar, Vijay;
Reo, Nicholas V.;
Paliy, Oleg

Publication type:

Article

Microbial aerosol liberation from soiled textiles isolated during routine residuals handling in a modern health care setting.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0132-3

By:

Handorean, Alina;
Robertson, Charles E.;
Kirk Harris, J.;
Frank, Daniel;
Hull, Natalie;
Kotter, Cassandra;
Stevens, Mark J.;
Baumgardner, Darrel;
Pace, Norman R.;
Hernandez, Mark

Publication type:

Article

Moisture parameters and fungal communities associated with gypsum drywall in buildings.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0137-y

By:

Dedesko, Sandra;
Siegel, Jeffrey A.

Publication type:

Article

A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0129-y

By:

Weinmaier, Thomas;
Probst, Alexander J.;
La Duc, Myron T.;
Ciobanu, Doina;
Jan-Fang Cheng;
Ivanova, Natalia;
Rattei, Thomas;
Vaishampayan, Parag

Publication type:

Article

Summary of Sloan symposium: healthy buildings 2015-Europe.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0115-4

By:

Levin, Hal;
Täubel, Martin;
Hernandez, Mark

Publication type:

Article

Microbial biogeography of a university campus.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0135-0

By:

Ross, Ashley A.;
Neufeld, Josh D.

Publication type:

Article

Water heater temperature set point and water use patterns influence Legionella pneumophila and associated microorganisms at the tap.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0134-1

By:

Rhoads, William J.;
Ji, Pan;
Pruden, Amy;
Edwards, Marc A.

Publication type:

Article

The first microbial environment of infants born by C-section: the operating room microbes.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0126-1

By:

Hakdong Shin;
Zhiheng Pei;
Martinez II, Keith A.;
Rivera-Vinas, Juana I.;
Mendez, Keimari;
Cavallin, Humberto;
Dominguez-Bello, Maria G.

Publication type:

Article

Phenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0121-6

By:

Bauer, Eugen;
Laczny, Cedric Christian;
Magnusdottir, Stefania;
Wilmes, Paul;
Thiele, Ines

Publication type:

Article

Metagenomic analysis of the microbiota in the highly compartmented hindguts of six wood- or soil-feeding higher termites.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0118-1

By:

Rossmassler, Karen;
Dietrich, Carsten;
Thompson, Claire;
Mikaelyan, Aram;
Nonoh, James O.;
Scheffrahn, Rudolf H.;
Sillam-Dussès, David;
Brune, Andreas

Publication type:

Article

Characterizing the fecal microbiota of infants with botulism.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0119-0

By:

Shirey, T. Brian;
Dykes, Janet K.;
Lúquez, Carolina;
Maslanka, Susan E.;
Raphael, Brian H.

Publication type:

Article

Optimizing protocols for extraction of bacteriophages prior to metagenomic analyses of phage communities in the human gut.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0131-4

By:

Castro-Mejía, Josué L.;
Muhammed, Musemma K.;
Kot, Witold;
Neve, Horst;
Franz, Charles M. A. P.;
Hansen, Lars H.;
Vogensen, Finn K.;
Nielsen, Dennis S.

Publication type:

Article

The functionality of the gastrointestinal microbiome in non-human animals.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0113-6

By:

Hanning, Irene;
Diaz-Sanchez, Sandra

Publication type:

Article

Chemostat culture systems support diverse bacteriophage communities from human feces.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0124-3

By:

Santiago-Rodriguez, Tasha M.;
Ly, Melissa;
Daigneault, Michelle C.;
Brown, Ian H. L.;
McDonald, Julie A. K.;
Bonilla, Natasha;
Vercoe, Emma Allen;
Pride, David T.

Publication type:

Article

Context and the human microbiome.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0117-2

By:

McDonald, Daniel;
Birmingham, Amanda;
Knight, Rob

Publication type:

Article

ERRATUM.

Published in:: Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0123-4
Publication type:: Article

Microbiomes of the dust particles collected from the International Space Station and Spacecraft Assembly Facilities.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0116-3

By:

Checinska, Aleksandra;
Probst, Alexander J.;
Vaishampayan, Parag;
White, James R.;
Kumar, Deepika;
Stepanov, Victor G.;
Fox, George E.;
Nilsson, Henrik R.;
Pierson, Duane L.;
Perry, Jay;
Venkateswaran, Kasthuri

Publication type:

Article

Microbiota of the indoor environment: a meta-analysis.

Published in:

Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0108-3

By:

Adams, Rachel I.;
Bateman, Ashley C.;
Bik, Holly M.;
Meadow, James F.

Publication type:

Article

Ecology of bacteria in the human gastrointestinal tract--identification of keystone and foundation taxa.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0107-4

By:

Trosvik, Pål;
de Muinck, Eric Jacques

Publication type:

Article

Phylogenetic approaches to microbial community classification.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0114-5

By:

Jie Ning;
Beiko, Robert G.

Publication type:

Article

An accurate and efficient experimental approach for characterization of the complex oral microbiota.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0110-9

By:

Wei Zheng;
Tsompana, Maria;
Ruscitto, Angela;
Sharma, Ashu;
Genco, Robert;
Yijun Sun;
Buck, Michael J.

Publication type:

Article

Passive dust collectors for assessing airborne microbial material.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0112-7

By:

Adams, Rachel I.;
Yilin Tian;
Taylor, John W.;
Bruns, Thomas D.;
Hyvärinen, Anne;
Täubel, Martin

Publication type:

Article

Improved OTU-picking using long-read 16S rRNA gene amplicon sequencing and generic hierarchical clustering.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0105-6

By:

Franzén, Oscar;
Jianzhong Hu;
Xiuliang Bao;
Itzkowitz, Steven H.;
Peter, Inga;
Bashir, Ali

Publication type:

Article

Cultivation of stable, reproducible microbial communities from different fecal donors using minibioreactor arrays (MBRAs).

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0106-5

By:

Auchtung, Jennifer M.;
Robinson, Catherine D.;
Britton, Robert A.

Publication type:

Article

The role of breast-feeding in infant immune system: a systems perspective on the intestinal microbiome.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0104-7

By:

Praveen, Paurush;
Jordan, Ferenc;
Priami, Corrado;
Morine, Melissa J.

Publication type:

Article

Intestinal microbial communities associated with acute enteric infections and disease recovery.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0109-2

By:

Singh, Pallavi;
Teal, Tracy K.;
Marsh, Terence L.;
Tiedje, James M.;
Mosci, Rebekah;
Jernigan, Katherine;
Zell, Angela;
Newton, Duane W.;
Salimnia, Hossein;
Lephart, Paul;
Sundin, Daniel;
Khalife, Walid;
Britton, Robert A.;
Rudrik, James T.;
Manning, Shannon D.

Publication type:

Article

Type 2 immunity-dependent reduction of segmented filamentous bacteria in mice infected with the helminthic parasite Nippostrongylus brasiliensis.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0103-8

By:

Fricke, W. Florian;
Yang Song;
An-Jiang Wang;
Smith, Allen;
Grinchuk, Viktoriya;
Chenlin Pei;
Bing Ma;
Nonghua Lu;
Urban Jr., Joseph F.;
Shea-Donohue, Terez;
Aiping Zhao

Publication type:

Article

Metagenomic and metatranscriptomic inventories of the lower Amazon River, May 2011.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0099-0

By:

Satinsky, Brandon M.;
Fortunato, Caroline S.;
Doherty, Mary;
Smith, Christa B.;
Sharma, Shalabh;
Ward, Nicholas D.;
Krusche, Alex V.;
Yager, Patricia L.;
Richey, Jeffrey E.;
Moran, Mary Ann;
Crump, Byron C.

Publication type:

Article

The effect of dietary resistant starch type 2 on the microbiota and markers of gut inflammation in rural Malawi children.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0102-9

By:

Ordiz, M. Isabel;
May, Thaddaeus D.;
Mihindukulasuriya, Kathie;
Martin, John;
Crowley, Jan;
Tarr, Phillip I.;
Ryan, Kelsey;
Mortimer, Elissa;
Gopalsamy, Geetha;
Maleta, Ken;
Mitreva, Makedonka;
Young, Graeme;
Manary, Mark J.

Publication type:

Article

In silico analyses of metagenomes from human atherosclerotic plaque samples.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0100-y

By:

Mitra, Suparna;
Drautz-Moses, Daniela I.;
Alhede, Morten;
Maw, Myat T.;
Yang Liu;
Purbojati, Rikky W.;
Yap, Zhei H.;
Kushwaha, Kavita K.;
Gheorghe, Alexandra G.;
Bjarnsholt, Thomas;
Hansen, Gorm M.;
Sillesen, Henrik H.;
Hougen, Hans P.;
Hansen, Peter R.;
Liang Yang;
Tolker-Nielsen, Tim;
Schuster, Stephan C.;
Givskov, Michael

Publication type:

Article

Structure and function of the healthy pre-adolescent pediatric gut microbiome.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0101-x

By:

Hollister, Emily B.;
Riehle, Kevin;
Luna, Ruth Ann;
Weidler, Erica M.;
Rubio-Gonzales, Michelle;
Mistretta, Toni-Ann;
Raza, Sabeen;
Doddapaneni, Harsha V.;
Metcalf, Ginger A.;
Muzny, Donna M.;
Gibbs, Richard A.;
Petrosino, Joseph F.;
Shulman, Robert J.;
Versalovic, James

Publication type:

Article

Humanized microbiota mice as a model of recurrent Clostridium difficile disease.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0097-2

By:

Collins, James;
Auchtung, Jennifer M.;
Schaefer, Laura;
Eaton, Kathryn A.;
Britton, Robert A.

Publication type:

Article

Xander: employing a novel method for efficient gene-targeted metagenomic assembly.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0093-6

By:

Qiong Wang;
Fish, Jordan A.;
Gilman, Mariah;
Yanni Sun;
Brown, C. Titus;
Tiedje, James M.;
Cole, James R.

Publication type:

Article

Collection media and delayed freezing effects on microbial composition of human stool.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0092-7

By:

Flores, Roberto;
Jianxin Shi;
Guoqin Yu;
Bing Ma;
Ravel, Jacques;
Goedert, James J.;
Sinha, Rashmi

Publication type:

Article

Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0081-x

By:

Yan He;
Caporaso, J. Gregory;
Xiao-Tao Jiang;
Hua-Fang Sheng;
Susan M. Huse;
Rideout, Jai Ram;
Edgar, Robert C.;
Kopylova, Evguenia;
Walters, William A.;
Knight, Rob;
Hong-Wei Zhou

Publication type:

Article

Erratum to: Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity.

Published in:: Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0098-1
Publication type:: Article

Amplicon sequencing for the quantification of spoilage microbiota in complex foods including bacterial spores.

Published in:

Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0096-3

By:

de Boer, Paulo;
Caspers, Martien;
Sanders, Jan-Willem;
Kemperman, Robèr;
Wijman, Janneke;
Lommerse, Gijs;
Roeselers, Guus;
Montijn, Roy;
Abee, Tjakko;
Kort, Remco

Publication type:

Article

Erratum: Gut resistome development in healthy twin pairs in the first year of life.

Published in:: Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0095-4
Publication type:: Article