Works matching IS 17598753 AND DT 2024 AND VI 15 AND IP 1

Results: 26

Controlling and controlled elements: highlights of the year in mobile DNA research.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00340-x

By:

Arkhipova, Irina R.;
Burns, Kathleen H.;
Lesage, Pascale

Publication type:

Article

Analysis of pericentromere composition and structure elucidated the history of the Hieracium alpinum L. genome, revealing waves of transposable elements insertions.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00336-7

By:

Belyayev, Alexander;
de la Peña, Begoña Quirós;
Corrales, Simon Villanueva;
Ling Low, Shook;
Frejová, Barbora;
Sejfová, Zuzana;
Josefiová, Jiřina;
Záveská, Eliška;
Bertrand, Yann J.K.;
Chrtek, Jindřich;
Mráz, Patrik

Publication type:

Article

International congress on transposable elements (ICTE 2024) in Saint Malo: breaking down transposon waves and their impact.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00334-9

By:

Lesage, Pascale;
Brasset, Emilie;
Cristofari, Gael;
Gilbert, Clément;
Mazel, Didier;
Rebollo, Rita;
Vitte, Clémentine

Publication type:

Article

Association of hyperactivated transposon expression with exacerbated immune activation in systemic lupus erythematosus.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00335-8

By:

Wang, Frank Qingyun;
Dang, Xiao;
Su, Huidong;
Lei, Yao;
She, Chun Hing;
Zhang, Caicai;
Chen, Xinxin;
Yang, Xingtian;
Yang, Jing;
Feng, Hong;
Yang, Wanling

Publication type:

Article

Accelerating de novo SINE annotation in plant and animal genomes.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00331-y

By:

Liao, Herui;
Sun, Yanni;
Ou, Shujun

Publication type:

Article

Evolution of Einkorn wheat centromeres is driven by the mutualistic interplay of two LTR retrotransposons.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00326-9

By:

Heuberger, Matthias;
Koo, Dal-Hoe;
Ahmed, Hanin Ibrahim;
Tiwari, Vijay K.;
Abrouk, Michael;
Poland, Jesse;
Krattinger, Simon G.;
Wicker, Thomas

Publication type:

Article

Correction: Transposon-derived introns as an element shaping the structure of eukaryotic genomes.

Published in:

2024

By:

Mikina, Weronika;
Hałakuc, Paweł;
Milanowski, Rafał

Publication type:

Correction Notice

A T cell receptor specific for an HLA-A*03:01-restricted epitope in the endogenous retrovirus ERV-K-Env exhibits limited recognition of its cognate epitope.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00333-w

By:

Grundy, Erin E.;
Shaw, Lauren C.;
Wang, Loretta;
Lee, Abigail V.;
Argueta, James Castro;
Powell Jr, Daniel J.;
Ostrowski, Mario;
Jones, R. Brad;
Cruz, C. Russell Y.;
Gordish-Dressman, Heather;
Chappell, Nicole P.;
Bollard, Catherine M.;
Chiappinelli, Katherine B.

Publication type:

Article

Transposable elements in Drosophila montana from harsh cold environments.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00328-7

By:

Tahami, Mohadeseh S.;
Vargas-Chavez, Carlos;
Poikela, Noora;
Coronado-Zamora, Marta;
González, Josefa;
Kankare, Maaria

Publication type:

Article

Identification and functional analysis of recent IS transposition events in rhizobia.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00327-8

By:

Mogro, Ezequiel G.;
Draghi, Walter O.;
Lagares, Antonio;
Lozano, Mauricio J.

Publication type:

Article

Widespread HCD-tRNA derived SINEs in bivalves rely on multiple LINE partners and accumulate in genic regions.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00332-x

By:

Martelossi, Jacopo;
Iannello, Mariangela;
Ghiselli, Fabrizio;
Luchetti, Andrea

Publication type:

Article

Transposon-derived introns as an element shaping the structure of eukaryotic genomes.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00325-w

By:

Mikina, Weronika;
Hałakuc, Paweł;
Milanowski, Rafał

Publication type:

Article

Subcellular location of L1 retrotransposon-encoded ORF1p, reverse transcription products, and DNA sensors in lupus granulocytes.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00324-x

By:

Moadab, Fatemeh;
Sohrabi, Sepideh;
Wang, Xiaoxing;
Najjar, Rayan;
Wolters, Justina C.;
Jiang, Hua;
Miao, Wenyan;
Romero, Donna;
Zaller, Dennis M.;
Tran, Megan;
Bays, Alison;
Taylor, Martin S.;
Kapeller, Rosana;
LaCava, John;
Mustelin, Tomas

Publication type:

Article

Identification of transposable element families from pangenome polymorphisms.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00323-y

By:

Sierra, Pío;
Durbin, Richard

Publication type:

Article

Internal initiation of reverse transcription in a Penelope-like retrotransposon.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00322-z

By:

Frangieh, Chris J.;
Wilkinson, Max E.;
Strebinger, Daniel;
Strecker, Jonathan;
Walsh, Michelle L.;
Faure, Guilhem;
Yushenova, Irina A.;
Macrae, Rhiannon K.;
Arkhipova, Irina R.;
Zhang, Feng

Publication type:

Article

Insertion of short L1 sequences generates inter-strain histone acetylation differences in the mouse.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00321-0

By:

Boyboy, Beverly Ann G.;
Ichiyanagi, Kenji

Publication type:

Article

Teaching transposon classification as a means to crowd source the curation of repeat annotation – a tardigrade perspective.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00319-8

By:

Peona, Valentina;
Martelossi, Jacopo;
Almojil, Dareen;
Bocharkina, Julia;
Brännström, Ioana;
Brown, Max;
Cang, Alice;
Carrasco-Valenzuela, Tomàs;
DeVries, Jon;
Doellman, Meredith;
Elsner, Daniel;
Espíndola-Hernández, Pamela;
Montoya, Guillermo Friis;
Gaspar, Bence;
Zagorski, Danijela;
Hałakuc, Paweł;
Ivanovska, Beti;
Laumer, Christopher;
Lehmann, Robert;
Boštjančić, Ljudevit Luka

Publication type:

Article

Long-read sequencing improves the genetic diagnosis of retinitis pigmentosa by identifying an Alu retrotransposon insertion in the EYS gene.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00320-1

By:

Fernández-Suárez, Elena;
González-del Pozo, María;
Méndez-Vidal, Cristina;
Martín-Sánchez, Marta;
Mena, Marcela;
de la Morena-Barrio, Belén;
Corral, Javier;
Borrego, Salud;
Antiñolo, Guillermo

Publication type:

Article

Look4LTRs: a Long terminal repeat retrotransposon detection tool capable of cross species studies and discovering recently nested repeats.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00317-w

By:

Garza, Anthony B.;
Lerat, Emmanuelle;
Girgis, Hani Z.

Publication type:

Article

Multiple horizontal transfer events of a DNA transposon into turtles, fishes, and a frog.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00318-9

By:

Hassan, Nozhat T.;
Galbraith, James D.;
Adelson, David L.

Publication type:

Article

RepEnTools: an automated repeat enrichment analysis package for ChIP-seq data reveals hUHRF1 Tandem-Tudor domain enrichment in young repeats.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00315-y

By:

Choudalakis, Michel;
Bashtrykov, Pavel;
Jeltsch, Albert

Publication type:

Article

Orthoptera-TElib: a library of Orthoptera transposable elements for TE annotation.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00316-x

By:

Liu, Xuanzeng;
Zhao, Lina;
Majid, Muhammad;
Huang, Yuan

Publication type:

Article

The role of Smarcad1 in retroviral repression in mouse embryonic stem cells.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00314-z

By:

Bren, Igor;
Tal, Ayellet;
Strauss, Carmit;
Schlesinger, Sharon

Publication type:

Article

CRISPR-TE: a web-based tool to generate single guide RNAs targeting transposable elements.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00313-0

By:

Guo, Yixin;
Xue, Ziwei;
Gong, Meiting;
Jin, Siqian;
Wu, Xindi;
Liu, Wanlu

Publication type:

Article

A systematic screen for co-option of transposable elements across the fungal kingdom.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-024-00312-1

By:

Oggenfuss, Ursula;
Badet, Thomas;
Croll, Daniel

Publication type:

Article

Evolutionary dynamics of the LTR-retrotransposon crapaud in the Podospora anserina species complex and the interaction with repeat-induced point mutations.

Published in:

Mobile DNA, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13100-023-00311-8

By:

Westerberg, Ivar;
Ament-Velásquez, S. Lorena;
Vogan, Aaron A.;
Johannesson, Hanna

Publication type:

Article