Works matching IS 17536561 AND DT 2012 AND VI 6 AND IP Suppl 6

Results: 84

Simple and precise targeted editing of the human genome using rAAV-mediated homologous recombination.
Published in:
2012
By:
- Torrance, Christopher J.
Publication type:
Abstract
CLIA-certified next-generation sequencing analysis in the cloud.
Published in:
2012
By:
- Ying Zhang;
- Erdmann, Jesse;
- Chilton, John;
- Onsongo, Getiria;
- Bower, Matthew;
- Beckman, Kenny;
- Thyagarajan, Bharat;
- Silverstein, Kevin;
- Lamblin, Anne-Francoise
Publication type:
Abstract
RNA-Seq analysis of two brain regions vulnerable to Alzheimer's disease.
Published in:
2012
By:
- Xinkun Wang
Publication type:
Abstract
Mutational spectrum of WTX, WT1, CTNNB1, APC and PLCG2 genes in Wilms tumor defined by massive parallel resequencing.
Published in:
2012
By:
- Barros, Bruna D.;
- Torrezan, Giovana T.;
- Ferreira, Elisa N.;
- Maschietto, Mariana;
- Krepíschi, Ana C. V.;
- Carraro, Dirce M.
Publication type:
Abstract
Structural effect of P278A mutation conferring breast cancer susceptibility in the p53 DNA-binding core domain.
Published in:
2012
By:
- Suneetha, Y.;
- Kumaraswamy Naidu, C.
Publication type:
Abstract
Dirichlet process model for joint haplotype inference and GWAS.
Published in:
2012
By:
- Sahu, Avinash Das;
- Hannenhalli, Sridhar
Publication type:
Abstract
POSTER PRESENTATION.
Published in:
BMC Proceedings, 2012, v. 6, n. Suppl 6, p. 1, doi. 10.1186/1753-6561-6-S6-P47
Publication type:
Article
Verification of systems biology research in the age of collaborative competition.
Published in:
2012
By:
- Poussin, Carine
Publication type:
Abstract
POSTER PRESENTATION.
Published in:
BMC Proceedings, 2012, v. 6, n. Suppl 6, p. 1, doi. 10.1186/1753-6561-6-S6-P46
Publication type:
Article
Apoptotic gene expression in melanoma cells treated with kaurenic acid.
Published in:
2012
By:
- Rivero, María B.;
- Mendoza, Hernán J.;
- AChiurillo, Miguel;
- Sosa-Seguera, Miriam C.
Publication type:
Abstract
Modeling influenza sequence evolution for vaccination.
Published in:
2012
By:
- Taijiao Jiang
Publication type:
Abstract
Deep sequencing of the microRNA transcriptome in current, former, and never smokers with lung adenocarcinoma.
Published in:
2012
By:
- Teresa W. Wang;
- Campbell, Josh D.;
- Lingqi Luo;
- Gang Liu;
- Ji Xiao;
- Lenburg, Marc E.;
- Belinsky, Steven A.;
- Spira, Avrum
Publication type:
Abstract
Optimizing genotype quality metrics for individual exomes and cohort analysis.
Published in:
2012
By:
- Gordon, Paul M. K.;
- Dimnik, Leo;
- Lamont, Ryan;
- Innes, Micheil;
- Bernier, Francois;
- Parboosingh, Jillian
Publication type:
Abstract
Metabolomic and exome sequence analysis reveal novel molecular signatures associated with colorectal cancer relapse.
Published in:
2012
By:
- Gauba, Robinder;
- Natarajan, Thanemozhi G.;
- Lei Song;
- Bhuvaneshwar, Krithika;
- Madhavan, Subha;
- Gusev, Yuriy
Publication type:
Abstract
Massively parallel sequencing of formalin-fixed paraffin-embedded tissues.
Published in:
2012
By:
- Erlich, Rachel L.;
- Palescandolo, Emanuele;
- Jones, Robert T.;
- Sunkavalli, Ashwini;
- Raza, Alina;
- Ducar, Matthew;
- Hatton, Charles;
- Go, Christina;
- Roden, Christine;
- Hanna, Megan;
- Mills, Adri;
- Adusumilli, Ravali;
- Kumar, Prateek;
- Brastianos, Priscilla K.;
- Meyerson, Matthew L.;
- Hahn, William C.;
- MacConaill, Laura E.;
- Van Hummelen, Paul
Publication type:
Abstract
Metastatic outgrowth encompasses COL-I, FN1 and POSTN upregulation and assembly to fibrillar networks regulating cell adhesion, migration and growth.
Published in:
2012
By:
- Soikkeli, J.;
- Yin, M.;
- Hölttä, E.
Publication type:
Abstract
ICGC PedBrain - dissecting the genomic complexity underlying medulloblastoma using whole-genome sequencing.
Published in:
2012
By:
- Jäger, Natalie;
- Jones, David T. W.;
- Kool, Marcel;
- Zichner, Thomas;
- Hutter, Barbara;
- Sultan, Marc;
- Yoon-Jae Cho;
- Pugh, Trevor J.;
- Hovestadt, Volker;
- Stütz, Adrian M.;
- Rausch, Tobias;
- Warnatz, Hans-Jörg;
- Brors, Benedikt;
- Northcott, Paul A.;
- Taylor, Michael D.;
- Meyerson, Matthew;
- Pomeroy, Scott L.;
- Yaspo, Marie-Laure;
- Korbel, Jan O.;
- Korshunov, Andrey
Publication type:
Abstract
AVIA: an interactive web-server for annotation, visualization and impact analysis of genomic variations.
Published in:
2012
By:
- Hue Vuong;
- Stephens, Robert M.;
- Volfovsky, Natalia
Publication type:
Abstract
Next-generation sequencing at Merck-Boston.
Published in:
2012
By:
- Stevens, Richard
Publication type:
Abstract
Exome sequencing identifies somatic point mutations associated with acquired endocrine resistance in breast cancer cell lines.
Published in:
2012
By:
- Ehlers, Natasja S.;
- Zhu Shi Da;
- Elias, Daniel;
- Xue Lin;
- Jian Li;
- Bjerre, Christina;
- Brunner, Nils;
- Bolund, Lars;
- Wang Jun;
- Gupta, Ramneek;
- Ditzel, Henrik J.
Publication type:
Abstract
Dissecting the genetic architecture of coronary artery disease by genome engineering.
Published in:
2012
By:
- Segal, David J.;
- Bhakta, Mital S.;
- Das, Kumitaa Theva;
- Chongxiu Sun;
- Grace, Natalie M.;
- Nolta, Jan A.;
- Knowlton, Anne A.;
- Rocke, David M.;
- Simon, Scott I.
Publication type:
Abstract
Targeted genome reconstruction strategy for endosymbionts in eukaryotic genomes.
Published in:
2012
By:
- Saha, Surya;
- Hunter, Wayne B.;
- Lindeberg, Magdalen
Publication type:
Abstract
Transcriptomics analysis revealed an indirect effect of aqueous cigarette smoke extract in promoting the adhesion of monocytic cells to endothelial cells.
Published in:
2012
By:
- Poussin, Carine;
- Gallitz, Inka;
- Schlage, Walter;
- Steffen, Yvonne;
- Stolle, Katrin;
- Lebrun, Stephan;
- Hoeng, Julia;
- Lietz, Michael
Publication type:
Abstract
A study on genetic aspects of male infertility in North-east Indian population, India.
Published in:
2012
By:
- Barbhuiya, Purnali Nath;
- Gogoi, Anannya;
- Ahmed, Giasuddin;
- Mahanta, Rita
Publication type:
Abstract
Comparative analysis of strand-specific RNA sequencing approaches.
Published in:
2012
By:
- Munafo, Daniela;
- Ping Liu;
- Sumner, Christine;
- Yigit, Erbay;
- Merrill, Landon;
- Apone, Lynne;
- Langhorst, Brad;
- Stewart, Fiona;
- Dimalanta, Eileen T.;
- Davis, Theodore
Publication type:
Abstract
siRNAs targeting the ERK2 signaling pathway and AML1/MTG8 fusion gene attenuate the differentiation, proliferation and growth arrest in t(8;21) leukemia.
Published in:
2012
By:
- Bashanfer, Salem;
- Al-Hassan, Faisal Mutee;
- Hassan, Rosline;
- Heidenreich, Olaf;
- Said, Mohamed Saifulaman Mohamed;
- Yusoff, Narazah Mohd
Publication type:
Abstract
Enhancer network revealed by correlated DNAse HS states of enhancers.
Published in:
2012
By:
- Malin, Justin;
- Aniba, Radhouane;
- Hannenhalli, Sridhar
Publication type:
Abstract
A functional role of the SNP -592 of human IL10 gene regulatory region is associated with an increased IL-10 expression and risk for human papillomavirus cervical lesion and cervical cancer development.
Published in:
2012
By:
- Torres-Poveda, K.;
- Burguete-García, A.;
- Bahena-Román, M.;
- Ortíz-Flores, E.;
- Delgado-Romero, K.;
- Cantú, D.;
- García-Carrancá, A.;
- Madrid-Marina, V.
Publication type:
Abstract
A fast solution to NGS library preparation with low nanogram DNA input.
Published in:
2012
By:
- Pingfang Liu;
- Lohman, Gregory J.S.;
- Cantor, Eric;
- Langhorst, Bradley W.;
- Yigit, Erbay;
- Apone, Lynne M.;
- Munafo, Daniela B.;
- Sumner, Christine;
- Stewart, Fiona J.;
- Evans Jr., Thomas C.;
- Nichols, Nicole M.;
- Dimalanta, Eileen T.;
- Davis, Theodore B.
Publication type:
Abstract
Multiple de novo copy number variations in two subjects with developmental problems and multiple congenital anomalies.
Published in:
2012
By:
- Pengfei Liu;
- Walter, Klaudia;
- Writzl, Karin;
- Gelowani, Violet;
- Lindsay, Sarah;
- Carvalho, Claudia M.B.;
- Withers, Marjorie;
- Wiszniewska, Joanna;
- Patel, Ankita;
- Rautenstrauss, Bernd;
- Hurles, Matthew E.;
- Lupski, James R.
Publication type:
Abstract
Extended homozygous haplotypes at genes involved in brain development associated with autism.
Published in:
2012
By:
- Ping-I Lin
Publication type:
Abstract
Reflex™: a novel method to sequence barcoded long-range PCR products in a pooled population of hundreds of DNA samples.
Published in:
2012
By:
- Casbon, James;
- Slatter, Andrew;
- Musgrave-Brown, Esther;
- Osborne, Robert;
- Lichtenstein, Conrad;
- Brenner, Sydney
Publication type:
Abstract
Investigation of retroviral integration preference via high-throughput sequencing.
Published in:
2012
By:
- LaFave, Matthew C.;
- Varshney, Gaurav K.;
- Burgess, Shawn M.
Publication type:
Abstract
Comprehensive genomic profiling of the lung transcriptome in emphysema and idiopathic pulmonary fibrosis using RNA-Seq.
Published in:
2012
By:
- Kusko, Rebecca L.;
- Brothers II, John;
- Liu, Gang;
- Luo, Lingqi;
- Guardela, Brenda Juan;
- Tedrow, John;
- Aleksyev, Yuriy;
- Yang, Ivana V.;
- Correll, Mick;
- Geraci, Mark;
- Quackenbush, John;
- Sciurba, Frank;
- Lenburg, Marc;
- Schwartz, David A.;
- Beane, Jennifer;
- Kaminski, Naftali;
- Spira, Avrum
Publication type:
Abstract
Deploying next-generation sequencing in a hospital setting.
Published in:
2012
By:
- Jorgensen, Lars G. T.;
- Siminovitch, Katherine
Publication type:
Abstract
POSTER PRESENTATION.
Published in:
BMC Proceedings, 2012, v. 6, n. Suppl 6, p. 1, doi. 10.1186/1753-6561-6-S6-P20
Publication type:
Article
Investigation of rare variation in one thousand cancer genes and its association with risk of breast and prostate cancer.
Published in:
2012
By:
- Klevebring, Daniel;
- Lindberg, Johan;
- Sundling, Simon;
- Neiman, Mårten;
- Sandberg, Julia;
- Wiklund, Fredrik;
- Hall, Per;
- Grönberg, Henrik;
- Czene, Kamila
Publication type:
Abstract
In silico drug screening and potential target identification for hepatocellular carcinoma using support vector machine.
Published in:
2012
By:
- Wu-Lung R Yang;
- Yu-En Lee;
- Ming-Huang Chen;
- Yu-Wen Liu;
- Pei-Ying Lee;
- Kun-Mao Chao;
- Chi-Ying F Huang
Publication type:
Abstract
Mining cancer genomes in COSMIC.
Published in:
2012
By:
- Jia, Mingming;
- Forbes, Simon A.;
- Beare, David;
- Bindal, Nidhi;
- Gunasekaran, Prasad;
- Leung, Kenric;
- Kok, Chai Yin;
- Bamford, Sally;
- Cole, Charlotte;
- Ward, Sari;
- Teague, Jon;
- Stratton, Michael R.;
- Campbell, Peter;
- Futreal, Andrew
Publication type:
Abstract
Bernoulli mixture models in application to the evaluation of algorithms estimating functionality of missense mutations.
Published in:
2012
By:
- Hicks, Stephanie;
- Plon, Sharon E.;
- Kimmel, Marek
Publication type:
Abstract
An integrative genomics approach for mapping the emerging genetic susceptibility landscape of triple-negative breast cancer.
Published in:
2012
By:
- Hicks, Chindo;
- Pannuti, Antonio;
- Backus, Kandis;
- Miele, Lucio
Publication type:
Abstract
Discovering epigenetic changes in response to tungsten-alloy treatment using next-generation sequencing technologies.
Published in:
2012
By:
- Verma, Ranjana;
- Grover, Deepak;
- Galdzicki, Zygmunt
Publication type:
Abstract
POSTER PRESENTATION.
Published in:
BMC Proceedings, 2012, v. 6, n. Suppl 6, p. 1, doi. 10.1186/1753-6561-6-S6-P12
Publication type:
Article
The consequences of denoising marker-based metagenomic data.
Published in:
2012
By:
- Gaspar, John M.;
- Kelley Thomas, W.
Publication type:
Abstract
Exome sequencing combined with semantic discovery identifies strong disease-associated candidates in a single case of relapsing remitting multiple sclerosis.
Published in:
2012
By:
- Jalali Sefid Dashti, Mahjoubeh;
- Kotze, Maritha;
- Janse van Rensburg, Susan;
- Christoffels, Alan;
- Gamieldien, Junaid
Publication type:
Abstract
Genome-wide analysis of primate and rodent protein-coding and associated non-coding nucleotide sequences.
Published in:
2012
By:
- Gadagkar, Sudhindra R.;
- Rond, Luke A.
Publication type:
Abstract
The association between LRP1 and chylomicron uptake after the ingestion of a high-fat meal.
Published in:
2012
By:
- Frazier-Wood, A. C.;
- Kabagambe, E. K.;
- Wojczynski, M. K.;
- Borecki, I. B.;
- Tiwari, H. K.;
- Smith, C. E.;
- Ordovas, J. M.;
- Arnett, D. K.
Publication type:
Abstract
Major differences in microRNA quantification are platform and sequence dependent.
Published in:
2012
By:
- Feldmesser, Ester;
- Leshkowitz, Dena;
- Parmet, Yisrael;
- Horn-Saban, Shirley
Publication type:
Abstract
Characterizing the small RNA transcriptome associated with COPD and ILD using next-generation sequencing.
Published in:
2012
By:
- Campbell, Joshua D.;
- Luo, Lingqi;
- Liu, Gang;
- Xiao, Ji;
- Gerrein, Joseph;
- Guardela, Brenda J.;
- Tedrow, John;
- Aleksyev, Yuriy O.;
- Yang, Ivana V.;
- Correll, Mick;
- Geraci, Mark;
- Quackenbush, John;
- Sciurba, Frank;
- Schwartz, David A.;
- Kaminski, Naftali;
- Lenburg, Marc E.;
- Beane, Jennifer;
- Spira, Avrum
Publication type:
Abstract
Integration of a standardized pharmacogenomic platform for clinical decision support at Boston Children's Hospital.
Published in:
2012
By:
- Brownstein, Catherine;
- Fusaro, Vincent A.;
- Savage, Sarah;
- Clinton, Catherine;
- Mandl, Kenneth;
- Margulies, David;
- Wolf, Wendy;
- Manzi, Shannon
Publication type:
Abstract