Works matching IS 17487188 AND DT 2013 AND VI 8 AND IP 1
Results: 29
On the protein folding problem in 2D-triangular Lattices.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 2, doi. 10.1186/1748-7188-8-30
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Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 2, doi. 10.1186/1748-7188-8-28
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Efficient edit distance with duplications and contractions.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 2, doi. 10.1186/1748-7188-8-27
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Asymptotic structural properties of quasi-random saturated structures of RNA.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 2, doi. 10.1186/1748-7188-8-24
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Accelerating calculations of RNA secondary structure partition functions using GPUs.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 2, doi. 10.1186/1748-7188-8-29
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Recursive algorithms for phylogenetic tree counting.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 2, doi. 10.1186/1748-7188-8-26
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Space-efficient and exact de Bruijn graph representation based on a Bloom filter.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-22
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An enhancement of binary particle swarm optimization for gene selection in classifying cancer classes.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-15
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Reconciliation and local gene tree rearrangement can be of mutual profit.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-12
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DCJ-indel and DCJ-substitution distances with distinct operation costs.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-21
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Unrooted unordered homeomorphic subtree alignment of RNA trees.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-13
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- Article
Fast half-sibling population reconstruction: theory and algorithms.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-20
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MORPH-PRO: a novel algorithm and web server for protein morphing.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-19
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- Article
Protein Structure Idealization: How accurately is it possible to model protein structures with dihedral angles?
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-5
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- Article
Configurable pattern-based evolutionary biclustering of gene expression data.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-4
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Coexpression and coregulation analysis of time-series gene expression data in estrogen-induced breast cancer cell.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-9
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DCJ-Indel sorting revisited.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-6
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Extracting conflict-free information from multi-labeled trees.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-18
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Resolving spatial inconsistencies in chromosome conformation measurements.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-8
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Estimating population size via line graph reconstruction.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-17
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MCOIN: a novel heuristic for determining transcription factor binding site motif width.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-16
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LocARNAscan: Incorporating thermodynamic stability in sequence and structure-based RNA homology search.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-14
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Ultrametric networks: a new tool for phylogenetic analysis.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-7
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Incompatible quartets, triplets, and characters.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-11
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Gene Ontology consistent protein function prediction: the FALCON algorithm applied to six eukaryotic genomes.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-10
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Using graph models to find transcription factor modules: the hitting set problem and an exact algorithm.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-2
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A mixed integer linear programming model to reconstruct phylogenies from single nucleotide polymorphism haplotypes under the maximum parsimony criterion.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-3
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The difficulty of protein structure alignment under the RMSD.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1748-7188-8-1
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- Article
Probabilistic grammatical model for helix-helix contact site classification.
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- Algorithms for Molecular Biology, 2013, v. 8, n. 1, p. 2, doi. 10.1186/1748-7188-8-31
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