Works matching IS 17487188 AND DT 2012 AND VI 7 AND IP 1
Results: 36
A polynomial time algorithm for calculating the probability of a ranked gene tree given a species tree.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1748-7188-7-7
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Wrapper-based selection of genetic features in genome-wide association studies through fast matrix operations.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1748-7188-7-11
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The space of phylogenetic mixtures for equivariant models.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1748-7188-7-33
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Gene tree correction for reconciliation and species tree inference.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1748-7188-7-31
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Direct vs 2-stage approaches to structured motif finding.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1748-7188-7-20
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On the group theoretical background of assigning stepwise mutations onto phylogenies.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 36, doi. 10.1186/1748-7188-7-36
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Invariant based quartet puzzling.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 35, doi. 10.1186/1748-7188-7-35
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Alignment-free phylogeny of whole genomes using underlying subwords.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 34, doi. 10.1186/1748-7188-7-34
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Towards a practical O(n log n) phylogeny algorithm.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 32, doi. 10.1186/1748-7188-7-32
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Adaptive efficient compression of genomes.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 30, doi. 10.1186/1748-7188-7-30
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Distributional fold change test -- a statistical approach for detecting differential expression in microarray experiments.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 29, doi. 10.1186/1748-7188-7-29
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On the combinatorics of sparsification.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 28, doi. 10.1186/1748-7188-7-28
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Separating metagenomic short reads into genomes via clustering.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 27, doi. 10.1186/1748-7188-7-27
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Constructing perfect phylogenies and proper triangulations for three-state characters.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 26, doi. 10.1186/1748-7188-7-26
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Finding driver pathways in cancer: models and algorithms.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 23, doi. 10.1186/1748-7188-7-23
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Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 22, doi. 10.1186/1748-7188-7-22
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Sampling solution traces for the problem of sorting permutations by signed reversals.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 18, doi. 10.1186/1748-7188-7-18
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Parsimonious reconstruction of network evolution.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 25, doi. 10.1186/1748-7188-7-25
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Bootstrapping phylogenies inferred from rearrangement data.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 21, doi. 10.1186/1748-7188-7-21
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Getting DNA copy numbers without control samples.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 19, doi. 10.1186/1748-7188-7-19
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Efficient procedures for the numerical simulation of mid-size RNA kinetics.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 24, doi. 10.1186/1748-7188-7-24
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Analysis of Metabolic Subnetworks by Flux Cone Projection.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 17, doi. 10.1186/1748-7188-7-17
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- Article
Fast structure similarity searches among protein models: efficient clustering of protein fragments.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 16, doi. 10.1186/1748-7188-7-16
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- Article
Ubiquity of synonymity: almost all large binary trees are not uniquely identified by their spectra or their immanantal polynomials.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 14, doi. 10.1186/1748-7188-7-14
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- Article
Tree-average distances on certain phylogenetic networks have their weights uniquely determined.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 13, doi. 10.1186/1748-7188-7-13
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- Article
Fractal MapReduce decomposition of sequence alignment.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 12, doi. 10.1186/1748-7188-7-12
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- Article
Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 10, doi. 10.1186/1748-7188-7-10
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- Article
Invariants and Other Structural Properties of Biochemical Models as a Constraint Satisfaction Problem.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 15, doi. 10.1186/1748-7188-7-15
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- Article
Maximum Parsimony on Phylogenetic networks.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 9, doi. 10.1186/1748-7188-7-9
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- Article
Reconciling taxonomy and phylogenetic inference: formalism and algorithms for describing discord and inferring taxonomic roots.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 8, doi. 10.1186/1748-7188-7-8
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- Article
Computing evolutionary distinctiveness indices in large scale analysis.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 6, doi. 10.1186/1748-7188-7-6
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- Article
A normalization strategy for comparing tag count data.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 5, doi. 10.1186/1748-7188-7-5
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- Article
QTL/microarray approach using pathway information.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1748-7188-7-1
- Publication type:
- Article
TS-AMIR: a topology string alignment method for intensive rapid protein structure comparison.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 4, doi. 10.1186/1748-7188-7-4
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- Article
MRL and SuperFine+MRL: new supertree methods.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 3, doi. 10.1186/1748-7188-7-3
- Publication type:
- Article
A strand specific high resolution normalization method for chip-sequencing data employing multiple experimental control measurements.
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- Algorithms for Molecular Biology, 2012, v. 7, n. 1, p. 1, doi. 10.1186/1748-7188-7-2
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