Works matching DE "REPLICONS"

Results: 178

A global profile of replicative polymerase usage.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 3, p. 192, doi. 10.1038/nsmb.2962

By:

Daigaku, Yasukazu;
Keszthelyi, Andrea;
Müller, Carolin A;
Miyabe, Izumi;
Brooks, Tony;
Retkute, Renata;
Hubank, Mike;
Nieduszynski, Conrad A;
Carr, Antony M

Publication type:

Article

Genome rearrangements and megaplasmid loss in the filamentous bacterium Kitasatospora viridifaciens are associated with protoplast formation and regeneration.

Published in:

Antonie van Leeuwenhoek, 2020, v. 113, n. 6, p. 825, doi. 10.1007/s10482-020-01393-7

By:

Ramijan, Karina;
Zhang, Zheren;
van Wezel, Gilles P.;
Claessen, Dennis

Publication type:

Article

Insight from the draft genome of Dietzia cinnamea P4 reveals mechanisms of survival in complex tropical soil habitats and biotechnology potential.

Published in:

Antonie van Leeuwenhoek, 2012, v. 101, n. 2, p. 289, doi. 10.1007/s10482-011-9633-7

By:

Procópio, Luciano;
Alvarez, Vanessa;
Jurelevicius, Diogo;
Hansen, Lars;
Sørensen, Søren;
Cardoso, Janine;
Pádula, Marcelo;
Leitão, Álvaro;
Seldin, Lucy;
Elsas, Jan

Publication type:

Article

Construction of a mini-RNA replicon in Escherichia coli.

Published in:

Synthetic Biology (23977000), 2023, v. 8, n. 1, p. 1, doi. 10.1093/synbio/ysad004

By:

Kashiwagi, Akiko;
Yomo, Tetsuya

Publication type:

Article

Stochastic association of neighboring replicons creates replication factories in budding yeast.

Published in:

Journal of Cell Biology, 2013, v. 202, n. 7, p. 1001, doi. 10.1083/jcb.201306143

By:

Saner, Nazan;
Karschau, Jens;
Toyoaki Natsume;
Gierliński, Marek;
Retkute, Renata;
Hawkins, Michelle;
Nieduszynski, Conrad A.;
Blow, J. Julian;
de Moura, Alessandro P. S.;
Tomoyuki U. Tanaka

Publication type:

Article

Plasmid DNA-Based Alphavirus Vaccines.

Published in:

Vaccines, 2019, v. 7, n. 1, p. 29, doi. 10.3390/vaccines7010029

By:

Lundstrom, Kenneth

Publication type:

Article

Rapid assembly of SARS-CoV-2 genomes reveals attenuation of the Omicron BA.1 variant through NSP6.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37787-0

By:

Taha, Taha Y.;
Chen, Irene P.;
Hayashi, Jennifer M.;
Tabata, Takako;
Walcott, Keith;
Kimmerly, Gabriella R.;
Syed, Abdullah M.;
Ciling, Alison;
Suryawanshi, Rahul K.;
Martin, Hannah S.;
Bach, Bryan H.;
Tsou, Chia-Lin;
Montano, Mauricio;
Khalid, Mir M.;
Sreekumar, Bharath K.;
Renuka Kumar, G.;
Wyman, Stacia;
Doudna, Jennifer A.;
Ott, Melanie

Publication type:

Article

Large-Scale Sequencing of Borreliaceae for the Construction of Pan-Genomic-Based Diagnostics.

Published in:

Genes, 2022, v. 13, n. 9, p. 1604, doi. 10.3390/genes13091604

By:

Socarras, Kayla M.;
Haslund-Gourley, Benjamin S.;
Cramer, Nicholas A.;
Comunale, Mary Ann;
Marconi, Richard T.;
Ehrlich, Garth D.

Publication type:

Article

Genomic and Biotechnological Characterization of the Heavy-Metal Resistant, Arsenic-Oxidizing Bacterium Ensifer sp. M14.

Published in:

Genes, 2018, v. 9, n. 8, p. 379, doi. 10.3390/genes9080379

By:

diCenzo, George C;
Mengoni, Alessio;
Fagorzi, Camilla;
Debiec, Klaudia;
Uhrynowski, Witold;
Drewniak, Lukasz;
Krzysztoforski, Jan;
Gorecki, Adrian;
Dziewit, Lukasz;
Bajda, Tomasz;
Rzepa, Grzegorz

Publication type:

Article

REGEN: Ancestral Genome Reconstruction for Bacteria.

Published in:

Genes, 2012, v. 3, n. 3, p. 423, doi. 10.3390/genes3030423

By:

Kuan Yang;
Heath, Lenwood S.;
Setubal, João C.

Publication type:

Article

Molecular characterization and PCR-based replicon typing of multidrug resistant Shigella sonnei isolates from an outbreak in Thimphu, Bhutan.

Published in:

BMC Research Notes, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1756-0500-7-95

By:

Ruekit, Sirigade;
Wangchuk, Sonam;
Dorji, Tshering;
Kinzang Pem Tshering;
Pootong, Piyarat;
Nobthai, Panida;
Serichantalergs, Oralak;
Poramathikul, Kamonporn;
Bodhidatta, Ladaporn;
Mason, Carl Jeffries

Publication type:

Article

A simple method for construction of pir<sup>+</sup> Enterobacterial hosts for maintenance of R6K replicon plasmids.

Published in:: BMC Research Notes, 2012, v. 5, n. 1, p. 157, doi. 10.1186/1756-0500-5-157
Publication type:: Article

Epidemiology of Escherichia coli, Klebsiella Species, and Proteus mirabilis Strains Producing Extended-Spectrum β-Lactamases From Clinical Samples in the Kinki Region of Japan.

Published in:

American Journal of Clinical Pathology, 2012, v. 137, n. 4, p. 620, doi. 10.1309/AJCP48PDVKWQOXEZ

By:

Nakamura, Tatsuya;
Komatsu, Masaru;
Yamasaki, Katsutoshi;
Fukuda, Saori;
Miyamoto, Yugo;
Higuchi, Takeshi;
Ono, Tamotsu;
Nishio, Hisaaki;
Sueyoshi, Noriyuki;
Kida, Kenji;
Satoh, Kaori;
Toda, Hirofumi;
Toyokawa, Masahiro;
Nishi, Isao;
Sakamoto, Masako;
Akagi, Masahiro;
Nakai, Isako;
Kofuku, Tomomi;
Orita, Tamaki;
Wada, Yasunao

Publication type:

Article

Transcriptomic Response of Rhizobium leguminosarum to Acidic Stress and Nutrient Limitation Is Versatile and Substantially Influenced by Extrachromosomal Gene Pool.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 21, p. 11734, doi. 10.3390/ijms252111734

By:

Żebracki, Kamil;
Koper, Piotr;
Wójcik, Magdalena;
Marczak, Małgorzata;
Mazur, Andrzej

Publication type:

Article

A Newly Incompatibility F Replicon Allele (FIB81) in Extensively Drug-Resistant Escherichia coli Isolated from Diseased Broilers.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 15, p. 8347, doi. 10.3390/ijms25158347

By:

Ammar, Ahmed M.;
Abd El-Aziz, Norhan K.;
Aggour, Mohamed G.;
Ahmad, Adel A. M.;
Abdelkhalek, Adel;
Muselin, Florin;
Smuleac, Laura;
Pascalau, Raul;
Attia, Fatma A.

Publication type:

Article

Deciphering the Regulatory Circuits of RA3 Replication Module - Mechanisms of the Copy Number Control.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 17, p. 9964, doi. 10.3390/ijms23179964

By:

Markowska-Barkic, Aleksandra;
Lewicka, Ewa;
Czeredys, Magdalena;
Mitura, Monika;
Jagura-Burdzy, Grazyna

Publication type:

Article

Plasmidome of Listeria spp.—The repA -Family Business.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 19, p. 10320, doi. 10.3390/ijms221910320

By:

Chmielowska, Cora;
Korsak, Dorota;
Chapkauskaitse, Elvira;
Decewicz, Przemysław;
Lasek, Robert;
Szuplewska, Magdalena;
Bartosik, Dariusz

Publication type:

Article

Plasmid Replicons for the Production of Pharmaceutical-Grade pDNA, Proteins and Antigens by Lactococcus lactis Cell Factories.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 3, p. 1379, doi. 10.3390/ijms22031379

By:

Duarte, Sofia O.D.;
Monteiro, Gabriel A.

Publication type:

Article

Ralstonia solanacearum fatty acid composition is determined by interaction of two 3-ketoacyl-acyl carrier protein reductases encoded on separate replicons.

Published in:

BMC Microbiology, 2015, v. 15, p. 1, doi. 10.1186/s12866-015-0554-x

By:

Sai-Xiang Feng;
Jin-Cheng Ma;
Ji Yang;
Zhe Hu;
Lei Zhu;
Hong-Kai Bi;
Yi-Rong Sun;
Hai-Hong Wang

Publication type:

Article

Drug-resistant and hospital-associated Enterococcus faecium from wastewater, riverine estuary and anthropogenically impacted marine catchment basin.

Published in:

BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-66

By:

Sadowy, Ewa;
Luczkiewicz, Aneta

Publication type:

Article

Characterization of Rhizobium grahamii extrachromosomal replicons and their transfer among rhizobia.

Published in:

BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-6

By:

Althabegoiti, Maria Julia;
Ormeño-Orrillo, Ernesto;
Lozano, Luis;
Tejerizo, Gonzalo Torres;
Rogel, Marco Antonio;
Mora, Jaime;
Martínez-Romero, Esperanza

Publication type:

Article

Rapid plasmid replicon typing by real time PCR melting curve analysis.

Published in:

BMC Microbiology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2180-13-83

By:

Boot, Maikel;
Raadsen, Susanne;
Savelkoul, Paul H. M.;
Vandenbroucke-Grauls, Christina

Publication type:

Article

Statins enhance extracellular release of hepatitis C virus particles through ERK5 activation.

Published in:

Microbiology & Immunology, 2024, v. 68, n. 10, p. 359, doi. 10.1111/1348-0421.13166

By:

Aoki‐Utsubo, Chie;
Kameoka, Masanori;
Deng, Lin;
Hanafi, Muhammad;
Dewi, Beti Ernawati;
Sudarmono, Pratiwi;
Wakita, Takaji;
Hotta, Hak

Publication type:

Article

Genetic economy in picornaviruses: Foot-and-mouth disease virus replication exploits alternative precursor cleavage pathways.

Published in:

PLoS Pathogens, 2017, v. 13, n. 10, p. 1, doi. 10.1371/journal.ppat.1006666

By:

Herod, Morgan R.;
Gold, Sarah;
Lasecka-Dykes, Lidia;
Wright, Caroline;
Ward, Joseph C.;
McLean, Thomas C.;
Forrest, Sophie;
Jackson, Terry;
Tuthill, Tobias J.;
Rowlands, David J.;
Stonehouse, Nicola J.

Publication type:

Article

HCV-induced autophagosomes are generated via homotypic fusion of phagophores that mediate HCV RNA replication.

Published in:

PLoS Pathogens, 2017, v. 13, n. 9, p. 1, doi. 10.1371/journal.ppat.1006609

By:

Wang, Linya;
Kim, Ja Yeon;
Liu, Helene Minyi;
Lai, Michael M. C.;
Ou, Jing-hsiung James

Publication type:

Article

A nationwide genomic study of clinical Klebsiella pneumoniae in Norway 2001-15: introduction and spread of ESBLs facilitated by clonal groups CG15 and CG307.

Published in:

2022

By:

Fostervold, Aasmund;
Hetland, Marit A K;
Bakksjø, Ragna;
Bernhoff, Eva;
Holt, Kathryn E;
Samuelsen, Ørjan;
Simonsen, Gunnar Skov;
Sundsfjord, Arnfinn;
Wyres, Kelly L;
Löhr, Iren Høyland;
pneumoniae, The Norwegian Study Group on Klebsiella;
Norwegian Study Group on Klebsiella pneumoniae

Publication type:

journal article

Dissemination of Klebsiella pneumoniae ST147 NDM-1 in Poland, 2015-19.

Published in:

2021

By:

Biedrzycka, M;
Urbanowicz, P;
Guzek, A;
Brisse, S;
Gniadkowski, M;
Izdebski, R

Publication type:

journal article

Genomic background of the Klebsiella pneumoniae NDM-1 outbreak in Poland, 2012-18.

Published in:

2020

By:

Izdebski, R;
Sitkiewicz, M;
Urbanowicz, P;
Krawczyk, M;
Brisse, S;
Gniadkowski, M

Publication type:

journal article

Enterobacteriaceae producing OXA-48-like carbapenemases in Poland, 2013-January 2017.

Published in:

2018

By:

Izdebski, R.;
Baraniak, A.;
Żabicka, D.;
Machulska, M.;
Urbanowicz, P.;
Fiett, J.;
Literacka, E.;
Bojarska, K.;
Kozińska, A.;
Zieniuk, B.;
Hryniewicz, W.;
Gniadkowski, M.;
Zabicka, D;
Kozinska, A;
OXA-48-PL Study Group

Publication type:

journal article

Characterization of the population structure, drug resistance mechanisms and plasmids of the community-associated Enterobacter cloacae complex in China.

Published in:

2018

By:

Kai Zhou;
Wei Yu;
Xiaoli Cao;
Ping Shen;
Haifeng Lu;
Qixia Luo;
Rossen, John W. A.;
Yonghong Xiao;
Zhou, Kai;
Yu, Wei;
Cao, Xiaoli;
Shen, Ping;
Lu, Haifeng;
Luo, Qixia;
Xiao, Yonghong

Publication type:

journal article

Multiregional dissemination of KPC-producing Klebsiella pneumoniae ST258/ST512 genotypes in Poland, 2010-14.

Published in:

2017

By:

Baraniak, Anna;
Izdebski, Radosław;
Żabicka, Dorota;
Bojarska, Katarzyna;
Górska, Sandra;
Literacka, Elżbieta;
Fiett, Janusz;
Hryniewicz, Waleria;
Gniadkowski, Marek;
Izdebski, Radoslaw;
Zabicka, Dorota;
Literacka, Elzbieta;
KPC-PL2 Study Group

Publication type:

journal article

Analysis of blaSHV-12-carrying Escherichia coli clones and plasmids from human, animal and food sources.

Published in:

2017

By:

Alonso, Carla Andrea;
Michael, Geovana Brenner;
Jun Li;
Somalo, Sergio;
Simón, Carmen;
Yang Wang;
Kaspar, Heike;
Kadlec, Kristina;
Torres, Carmen;
Schwarz, Stefan;
Li, Jun;
Wang, Yang

Publication type:

journal article

Complete genetic analysis of plasmids carrying mcr-1 and other resistance genes in an Escherichia coli isolate of animal origin.

Published in:

2017

By:

Ruichao Li;
Miaomiao Xie;
Jingzhang Lv;
Edward Wai-Chi Chan;
Sheng Chen;
Li, Ruichao;
Xie, Miaomiao;
Lv, Jingzhang;
Wai-Chi Chan, Edward;
Chen, Sheng

Publication type:

journal article

High prevalence of Salmonella and IMP-4-producing Enterobacteriaceae in the silver gull on Five Islands, Australia.

Published in:

2016

By:

Dolejska, Monika;
Masarikova, Martina;
Dobiasova, Hana;
Jamborova, Ivana;
Karpiskova, Renata;
Havlicek, Martin;
Carlile, Nicholas;
Priddel, David;
Cizek, Alois;
Literak, Ivan

Publication type:

journal article

NDM-producing Enterobacteriaceae in Poland, 2012-14: inter-regional outbreak of Klebsiella pneumoniae ST11 and sporadic cases.

Published in:

2016

By:

Baraniak, A.;
Izdebski, R.;
Fiett, J.;
Gawryszewska, I.;
Bojarska, K.;
Herda, M.;
Literacka, E.;
Żabicka, D.;
Tomczak, H.;
Pewińska, N.;
Szarata, M.;
Ozorowski, T.;
Milner, A.;
Hryniewicz, W.;
Gniadkowski, M.

Publication type:

journal article

A novel small-molecule inhibitor of hepatitis C virus replication acts by suppressing signal transducer and activator of transcription 3.

Published in:

Journal of Antimicrobial Chemotherapy (JAC), 2015, v. 70, n. 7, p. 2013, doi. 10.1093/jac/dkv077

By:

Yuqiang Niu;
Youhui Si;
Yan Li;
Xiaojing Chi;
Xiang Li;
Xiuying Liu;
Duan Li;
Min Cheng;
Jingjing Fan;
Shuyi Si;
Wei Yang

Publication type:

Article

Organization and maintenance features of IncP-7 naphthalene degradation plasmid pFME5 basic replicon.

Published in:

Russian Journal of Genetics, 2013, v. 49, n. 5, p. 477, doi. 10.1134/S1022795413050116

By:

Volkova, O.;
Kosheleva, I.;
Boronin, A.

Publication type:

Article

Whole-Genome Analysis of Staphylococcus aureus Isolates from Ready-to-Eat Food in Russia.

Published in:

Foods, 2022, v. 11, n. 17, p. 2574, doi. 10.3390/foods11172574

By:

Mikhaylova, Yulia;
Shelenkov, Andrey;
Chernyshkov, Aleksey;
Tyumentseva, Marina;
Saenko, Stepan;
Egorova, Anna;
Manzeniuk, Igor;
Akimkin, Vasiliy

Publication type:

Article

Stringent response leads to continued cell division and a temporal restart of DNA replication after initial shutdown in Vibrio cholerae.

Published in:

Molecular Microbiology, 2019, v. 111, n. 6, p. 1617, doi. 10.1111/mmi.14241

By:

Kemter, Franziska S.;
Schallopp, Nadine;
Sperlea, Theodor;
Serrania, Javier;
Sobetzko, Patrick;
Fritz, Georg;
Waldminghaus, Torsten

Publication type:

Article

Mapping of active replication origins in vivo in thaum- and euryarchaeal replicons.

Published in:

Molecular Microbiology, 2013, v. 90, n. 3, p. 538, doi. 10.1111/mmi.12382

By:

Pelve, Erik A.;
Martens‐Habbena, Willm;
Stahl, David A.;
Bernander, Rolf

Publication type:

Article

Coupling between the Basic Replicon and the Kis-Kid Maintenance System of Plasmid R1: Modulation by Kis Antitoxin Levels and Involvement in Control of Plasmid Replication.

Published in:

Toxins, 2015, v. 7, n. 2, p. 478, doi. 10.3390/toxins7020478

By:

López-Villarejo, Juan;
Lobato-Márquez, Damián;
Díaz-Orejas, Ramón

Publication type:

Article

In Vitro Comparison of the Internal Ribosomal Entry Site Activity from Rodent Hepacivirus and Pegivirus and Construction of Pseudoparticles.

Published in:

Advances in Virology, 2021, p. 1, doi. 10.1155/2021/5569844

By:

Sims, Stuart;
Michaelsen, Kevin;
Burkhard, Sara;
Fraefel, Cornel

Publication type:

Article

In Vitro Comparison of the Internal Ribosomal Entry Site Activity from Rodent Hepacivirus and Pegivirus and Construction of Pseudoparticles.

Published in:

Advances in Virology, 2021, p. 1, doi. 10.1155/2021/5569844

By:

Sims, Stuart;
Michaelsen, Kevin;
Burkhard, Sara;
Fraefel, Cornel

Publication type:

Article

Haemagglutinin and nucleoprotein replicon particle vaccination of swine protects against the pandemic H1N1 2009 virus.

Published in:

Veterinary Record: Journal of the British Veterinary Association, 2013, v. 173, n. 14, p. 344, doi. 10.1136/vr.101741

By:

Vander Veen, R. L.;
Mogler, M. A.;
Russell, B. J.;
Loynachan, A. T.;
Harris, D. L. H.;
Kamrud, K. I.

Publication type:

Article

Characterization of a novel theta-type replicon of indigenous plasmid pTE15 from Lactobacillus reuteri N16.

Published in:

BMC Microbiology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12866-022-02718-4

By:

Chen, Po-Wen;
Lin, Chuen-Fu

Publication type:

Article

Characterization of a novel theta-type replicon of indigenous plasmid pTE15 from Lactobacillus reuteri N16.

Published in:

BMC Microbiology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12866-022-02718-4

By:

Chen, Po-Wen;
Lin, Chuen-Fu

Publication type:

Article

Molecular characteristics of global β-lactamase-producing Enterobacter cloacae by genomic analysis.

Published in:

BMC Microbiology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12866-022-02667-y

By:

Hu, Jincao;
Li, Jia;
Liu, Chang;
Zhang, Yan;
Xie, Hui;
Li, Chuchu;
Shen, Han;
Cao, Xiaoli

Publication type:

Article

Coordinated regulation of core and accessory genes in the multipartite genome of Sinorhizobium fredii.

Published in:

PLoS Genetics, 2018, v. 14, n. 5, p. 1, doi. 10.1371/journal.pgen.1007428

By:

Jiao, Jian;
Ni, Meng;
Zhang, Biliang;
Zhang, Ziding;
Young, J. Peter W.;
Chan, Ting-Fung;
Chen, Wen Xin;
Lam, Hon-Ming;
Tian, Chang Fu

Publication type:

Article

Identification of a replication initiation protein of the pVV8 plasmid from Thermus thermophilus HB8.

Published in:

Extremophiles, 2013, v. 17, n. 1, p. 15, doi. 10.1007/s00792-012-0489-1

By:

Ohtani, Naoto;
Tomita, Masaru;
Itaya, Mitsuhiro

Publication type:

Article

Alphavirus replicon vaccines.

Published in:

Animal Health Research Reviews, 2012, v. 13, n. 1, p. 1, doi. 10.1017/S1466252312000011

By:

Vander Veen, Ryan L.;
Harris, D. L. Hank;
Kamrud, Kurt I.

Publication type:

Article