Works matching Comparative genomics

Results: 5000

Comparative genomic characterization of multidrug-resistant Citrobacter spp. strains in Fennec fox imported to China.

Published in:

Gut Pathogens, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13099-021-00458-w

By:

Qin, Jie;
Zhao, Yishu;
Wang, Aifang;
Chi, Xiaohui;
Wen, Peipei;
Li, Shuang;
Wu, Lingjiao;
Bi, Sheng;
Xu, Hao

Publication type:

Article

The NIH Comparative Genomics Resource: addressing the promises and challenges of comparative genomics on human health.

Published in:

BMC Genomics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12864-023-09643-4

By:

Bornstein, Kristin;
Gryan, Gary;
Chang, E. Sally;
Marchler-Bauer, Aron;
Schneider, Valerie A.

Publication type:

Article

Comparative Genomics of Pesticide-Degrading Enterococcus Symbionts of Spodoptera frugiperda (Lepidoptera: Noctuidae) Leads to the Identification of Two New Species and the Reappraisal of Insect-Associated Enterococcus Species.

Published in:

Microbial Ecology, 2023, v. 86, n. 4, p. 2583, doi. 10.1007/s00248-023-02264-0

By:

Gomes, Ana Flávia Freitas;
de Almeida, Luís Gustavo;
Cônsoli, Fernando Luis

Publication type:

Article

Late-Onset Sacsinopathy Diagnosed by Exome Sequencing and Comparative Genomic Hybridization.

Published in:

Journal of Neurogenetics, 2013, v. 27, n. 4, p. 176, doi. 10.3109/01677063.2013.831094

By:

Pyle, Angela;
Griffin, Helen;
Duff, Jennifer;
Bennett, Shona;
Zwolinski, Simon;
Smertenko, Tania;
Yu-Wai Man, Patrick;
Santibanez-Koref, Mauro;
Horvath, Rita;
Chinnery, Patrick F.

Publication type:

Article

Arcyptera fusca and Arcyptera tornosi repetitive DNA families: whole-comparative genomic hybridization (W-CGH) as a novel approach to the study of satellite DNA libraries.

Published in:

Journal of Evolutionary Biology, 2008, v. 21, n. 1, p. 352, doi. 10.1111/j.1420-9101.2007.01436.x

By:

PITA, M.;
ZABAL-AGUIRRE, M.;
ARROYO, F.;
GOSÁLVEZ, J.;
LÓPEZ-FERNÁNDEZ, C.;
DE LA TORRE, J.

Publication type:

Article

Comparative genomics of Myxococcus and Pyxidicoccus, including the description of four novel species: Myxococcus guangdongensis sp. nov., Myxococcus qinghaiensis sp. nov., Myxococcus dinghuensis sp. nov., and Pyxidicoccus xibeiensis sp. nov.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 01, doi. 10.3389/fmicb.2022.995049

By:

Chunling Wang;
Yingying Lv;
Lian Zhou;
Yulian Zhang;
Qing Yao;
Honghui Zhu

Publication type:

Article

Comparative genomic analysis of Lacticaseibacillus paracasei SMN-LBK from koumiss.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1042117

By:

JianghanÂ Wang;
TongÂ Wang;
YandieÂ Li;
ZhexinÂ Fan;
ZhuoxiaÂ Lv;
LintingÂ Liu;
XuÂ Li;
BaokunÂ Li

Publication type:

Article

Comparative Genomic Analyses Provide Insight Into the Pathogenicity of Metschnikowia bicuspidata LNES0119.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.939141

By:

Jiang, Hongbo;
Bao, Jie;
Xing, Yuenan;
Li, Xiaodong;
Chen, Qijun

Publication type:

Article

Comparative Genomics Provides Insights Into Genetic Diversity of Clostridium tyrobutyricum and Potential Implications for Late Blowing Defects in Cheese.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.889551

By:

Podrzaj, Lucija;
Burtscher, Johanna;
Domig, Konrad J.

Publication type:

Article

Comparative genomics can provide new insights into the evolutionary mechanisms and gene function in CAM plants.

Published in:

Journal of Experimental Botany, 2019, v. 70, n. 22, p. 6539, doi. 10.1093/jxb/erz408

By:

Yang, Xiaohan;
Liu, Degao;
Tschaplinski, Timothy J;
Tuskan, Gerald A

Publication type:

Article

Whole Genome Sequencing and Comparative Genomics Analysis of Goat-Derived Klebsiella oxytoca.

Published in:

Genes, 2025, v. 16, n. 1, p. 13, doi. 10.3390/genes16010013

By:

Zhang, Yu;
Zhang, Zhenxing;
Wang, Ziying;
Chen, Yimei;
Liao, Lianjie;
Du, Li;
Gao, Hongyan;
Chen, Qiaoling;
Man, Churiga;
Chen, Si;
Wang, Fengyang

Publication type:

Article

Sequencing and Characterization of M. morganii Strain UM869: A Comprehensive Comparative Genomic Analysis of Virulence, Antibiotic Resistance, and Functional Pathways.

Published in:

Genes, 2023, v. 14, n. 6, p. 1279, doi. 10.3390/genes14061279

By:

Behera, Dibyajyoti Uttameswar;
Dixit, Sangita;
Gaur, Mahendra;
Mishra, Rukmini;
Sahoo, Rajesh Kumar;
Sahoo, Maheswata;
Behera, Bijay Kumar;
Subudhi, Bharat Bhusan;
Bharat, Sutar Suhas;
Subudhi, Enketeswara

Publication type:

Article

Comparative Genomic Analysis of Lactiplantibacillus plantarum Isolated from Different Niches.

Published in:

Genes, 2021, v. 12, n. 2, p. 241, doi. 10.3390/genes12020241

By:

Mao, Bingyong;
Yin, Ruimin;
Li, Xiaoshu;
Cui, Shumao;
Zhang, Hao;
Zhao, Jianxin;
Chen, Wei;
Gupta, Radhey S.

Publication type:

Article

Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics.

Published in:

Genes, 2019, v. 10, n. 8, p. 601, doi. 10.3390/genes10080601

By:

Nelkner, Johanna;
Torres Tejerizo, Gonzalo;
Hassa, Julia;
Lin, Timo Wentong;
Witte, Julian;
Verwaaijen, Bart;
Winkler, Anika;
Bunk, Boyke;
Spröer, Cathrin;
Overmann, Jörg;
Grosch, Rita;
Pühler, Alfred;
Schlüter, Andreas

Publication type:

Article

High-Resolution Array Comparative Genomic Hybridization Utility in Polish Newborns with Isolated Cleft Lip and Palate.

Published in:

Neonatology (16617800), 2015, v. 107, n. 3, p. 173, doi. 10.1159/000368878

By:

Szczałuba, Krzysztof;
Nowakowska, Beata a.;
Sobecka, Katarzyna;
Smyk, Marta;
Castaneda, Jennifer;
Dudkiewicz, Zofia;
Kutkowska-Kaźmierczak, anna;
Sąsiadek, Maria M.;
Śmigiel, Robert;
Bocian, Ewa

Publication type:

Article

MRF: a tool to overcome the barrier of inconsistent genome annotations and perform comparative genomics studies for the largest animal DNA virus.

Published in:

Virology Journal, 2023, v. 20, n. 1, p. 1, doi. 10.1186/s12985-023-02035-w

By:

Krishnan, Karthic;
Katneni, Vinaya Kumar;
Prabhudas, Sudheesh K.;
Kaikkolante, Nimisha;
Jangam, Ashok Kumar;
Katneni, Upendra Kumar;
Hauton, Chris;
Peruzza, Luca;
Mudagandur, Shashi Shekhar;
Koyadan, Vijayan K.;
Poochirian, Jithendran Karingalakkandy;
Jena, Joykrushna

Publication type:

Article

El Genoma en los Cordados: Introducción a la Genómica Comparada.

Published in:

International Journal of Morphology, 2012, v. 30, n. 4, p. 1309, doi. 10.4067/S0717-95022012000400009

By:

Ávila, Rodolfo E.;
Samar, María Elena;
Díaz-Beltrán, Leticia;
Esteban, Francisco J.

Publication type:

Article

Identification of Four Distinct Regions of Allelic Imbalances on Chromosome 1 by the Combined Comparative Genomic Hybridization and Microsatellite Analysis on Hepatocellular Carcinoma.

Published in:

Modern Pathology, 2002, v. 15, n. 11, p. 1213, doi. 10.1097/01.MP.0000036347.66943.3C

By:

Thomas H.-Y. Leung;
Nathalie Wong;
Lai, Paul B.-S.;
Andrew Chan;
Ka-Fai To;
Choong-Tsek Liew;
Wan Yee Lau;
Johnson, Philip J.

Publication type:

Article

Reveal the Differences in the Genome of Lactobacillus rhamnosus Probio-M9 and Other Lactobacillus rhamnosus Based on Comparative Genomics.

Published in:

Journal of Chinese Institute of Food Science & Technology / Zhongguo Shipin Xuebao, 2023, v. 23, n. 2, p. 254, doi. 10.16429/j.1009-7848.2023.02.025

By:

Xu Ruibo;
Liu Xu;
Li Weicheng;
Shen Xin;
Zhang Heping

Publication type:

Article

638. Comparative Genomics of Mycoplasma pneumoniae Isolated From Children with Pneumonia: South Korea, 2010–2016.

Published in:

Open Forum Infectious Diseases, 2019, v. 6, p. S295, doi. 10.1093/ofid/ofz360.706

By:

Lee, Hoan J;
Lee, Joon Kee;
Choi, Yun Young;
Park, Ji Young;
Seong, Moon-Woo;
Choi, Eun Hwa

Publication type:

Article

Comparative genomics of casein genes.

Published in:

Journal of Dairy Research, 2019, v. 86, n. 3, p. 323, doi. 10.1017/S0022029919000414

By:

Madende, Moses;
Osthoff, Gernot

Publication type:

Article

Comparative genomics and phylogenomics of the genus Glycyrrhiza (Fabaceae) based on chloroplast genomes.

Published in:

Frontiers in Pharmacology, 2024, p. 1, doi. 10.3389/fphar.2024.1371390

By:

Liwei Wu;
Panhui Fan;
Jiaying Cai;
Chenxi Zang;
Yulin Lin;
Zhichao Xu;
Zhengjun Wu;
Wei Gao;
Jingyuan Song;
Hui Yao

Publication type:

Article

Comparative genomics of seven genomes of genus Idiomarina reveals important halo adaptations and genes for stress response.

Published in:

3 Biotech, 2024, v. 14, n. 2, p. 1, doi. 10.1007/s13205-023-03887-3

By:

Kaur, Jaspreet;
Kaur, Jasvinder

Publication type:

Article

Comparative Genomics of Isolates of a <i>Pseudomonas aeruginosa</i> Epidemic Strain Associated with Chronic Lung Infections of Cystic Fibrosis Patients.

Published in:

PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0087611

By:

Jeukens, Julie;
Boyle, Brian;
Kukavica-Ibrulj, Irena;
Ouellet, Myriam M.;
Aaron, Shawn D.;
Charette, Steve J.;
Fothergill, Joanne L.;
Tucker, Nicholas P.;
Winstanley, Craig;
Levesque, Roger C.

Publication type:

Article

A Novel Candidate Vaccine for Cytauxzoonosis Inferred from Comparative Apicomplexan Genomics.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0071233

By:

Tarigo, Jaime L.;
Scholl, Elizabeth H.;
Bird, David McK.;
Brown, Corrie C.;
Cohn, Leah A.;
Dean, Gregg A.;
Levy, Michael G.;
Doolan, Denise L.;
Trieu, Angela;
Nordone, Shila K.;
Felgner, Philip L.;
Vigil, Adam;
Birkenheuer, Adam J.

Publication type:

Article

Bridging Comparative Genomics and DNA Marker-aided Molecular Breeding.

Published in:

Korean Journal of Breeding Science, 2011, v. 43, n. 2, p. 103

By:

Hong-Kyu Choi;
Cook, Douglas R.

Publication type:

Article

Multiplex PCR for detection of the Vibrio genus and five pathogenic Vibrio species with primer sets designed using comparative genomics.

Published in:

BMC Microbiology, 2015, v. 15, p. 1, doi. 10.1186/s12866-015-0577-3

By:

Hyun-Joong Kim;
Ji-Oh Ryu;
Shin-Young Lee;
Ei-Seul Kim;
Hae-Yeong Kim

Publication type:

Article

Comparative genomics analysis of c-di-GMP metabolism and regulation in Microcystis aeruginosa.

Published in:

BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6591-3

By:

Chen, Meng;
Xu, Chun-Yang;
Wang, Xu;
Ren, Chong-Yang;
Ding, Jiao;
Li, Li

Publication type:

Article

Genomic characteristics and comparative genomics analysis of the endophytic fungus Sarocladium brachiariae.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6095-1

By:

Yang, Yang;
Liu, Xiaobao;
Cai, Jimiao;
Chen, Yipeng;
Li, Boxun;
Guo, Zhikai;
Huang, Guixiu

Publication type:

Article

Comparative genomic analysis of the Hafnia genus reveals an explicit evolutionary relationship between the species alvei and paralvei and provides insights into pathogenicity.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6123-1

By:

Yin, Zhiqiu;
Yuan, Chao;
Du, Yuhui;
Yang, Pan;
Qian, Chengqian;
Wei, Yi;
Zhang, Si;
Huang, Di;
Liu, Bin

Publication type:

Article

Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-5774-2

By:

Mousavi-Derazmahalleh, Mahsa;
Chang, Steven;
Thomas, Geoff;
Derbyshire, Mark;
Bayer, Phillip E.;
Edwards, David;
Nelson, Matthew N.;
Erskine, William;
Lopez-Ruiz, Francisco J.;
Clements, Jon;
Hane, James K.

Publication type:

Article

Sinbase: An Integrated Database to Study Genomics, Genetics and Comparative Genomics in Sesamum indicum.

Published in:

Plant & Cell Physiology, 2015, v. 56, n. 1, p. e2, doi. 10.1093/pcp/pcu175

By:

Wang, Linhai;
Yu, Jingyin;
Li, Donghua;
Zhang, Xiurong

Publication type:

Article

Comparative Genomic Insights Into the Taxonomic Classification, Diversity, and Secondary Metabolic Potentials of Kitasatospora , a Genus Closely Related to Streptomyces.

Published in:

Frontiers in Microbiology, 2021, v. 2021, p. 1, doi. 10.3389/fmicb.2021.683814

By:

Li, Yisong;
Wang, Meng;
Sun, Zhong-Zhi;
Xie, Bin-Bin

Publication type:

Article

Flexible comparative genomics of prokaryotic transcriptional regulatory networks.

Published in:

BMC Genomics, 2020, v. 21, p. 1, doi. 10.1186/s12864-020-06838-x

By:

Kılıç, Sefa;
Sánchez-Osuna, Miquel;
Collado-Padilla, Antonio;
Barbé, Jordi;
Erill, Ivan

Publication type:

Article

A tiered approach to comparative genomics.

Published in:

Briefings in Functional Genomics & Proteomics, 2005, v. 4, n. 2, p. 178, doi. 10.1093/bfgp/4.2.178

By:

Ptacek, Travis;
Sell, Susan M.

Publication type:

Article

Correlations between Histological and Array Comparative Genomic Hybridization Characterizations of Wilms Tumor.

Published in:

Pathology & Oncology Research, 2019, v. 25, n. 3, p. 1199, doi. 10.1007/s12253-019-00601-8

By:

Chiang, Ming-Ru;
Kuo, Chi-Wen;
Wang, Wen-Chung;
Hou, Tai-Cheng;
Kuo, Chen-Yun;
Lu, Meng-Yao;
Lai, Yen-Chein

Publication type:

Article

Evolution and Comparative Genomics of the pSM22 Plasmid of the IncF/MOB<sub>F12</sub> Group.

Published in:

Molecular Biology, 2019, v. 53, n. 4, p. 535, doi. 10.1134/S0026893319040162

By:

Iasakov, T. R.;
Anisimova, L. G.;
Zharikova, N. V.;
Zhurenko, E. I.;
Korobov, V. V.;
Markusheva, T. V.

Publication type:

Article

Copy number variation in Fayoumi and Leghorn chickens analyzed using array comparative genomic hybridization.

Published in:

Animal Genetics, 2014, v. 45, n. 3, p. 400, doi. 10.1111/age.12141

By:

Abernathy, J.;
Li, X.;
Jia, X.;
Chou, W.;
Lamont, S. J.;
Crooijmans, R.;
Zhou, H.

Publication type:

Article

Corrigendum: Comparative Genomics of Marine Sponge-Derived Streptomyces spp. Isolates SM17 and SM18 With Their Closest Terrestrial Relatives Provides Novel Insights Into Environmental Niche Adaptations and Secondary Metabolite Biosynthesis Potential.

Published in:

2019

By:

Almeida, Eduardo L.;
Carrillo Rincón, Andrés Felipe;
Jackson, Stephen A.;
Dobson, Alan D. W.

Publication type:

Correction Notice

cano-wgMLST_BacCompare: A Bacterial Genome Analysis Platform for Epidemiological Investigation and Comparative Genomic Analysis.

Published in:

Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01687

By:

Liu, Yen-Yi;
Lin, Ji-Wei;
Chen, Chih-Chieh

Publication type:

Article

Complete Genome Sequence of Weissella hellenica 0916-4-2 and Its Comparative Genomic Analysis.

Published in:

Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01619

By:

Panthee, Suresh;
Paudel, Atmika;
Blom, Jochen;
Hamamoto, Hiroshi;
Sekimizu, Kazuhisa

Publication type:

Article

Molecular Cytogenetic Analysis of Basal Cell Carcinoma DNA Using Comparative Genomic Hybridization.

Published in:

Journal of Investigative Dermatology, 2001, v. 117, n. 3, p. 683, doi. 10.1046/j.0022-202x.2001.01434.x

By:

Ashton, Kevin J.;
Weinstein, Stephen R.;
Maguire, David J.;
Griffiths, Lyn R.

Publication type:

Article

Phylogenomic analyses and comparative genomic studies of Thermus strains isolated from Tengchong and Tibet Hot Springs, China.

Published in:

Antonie van Leeuwenhoek, 2024, v. 117, n. 1, p. 1, doi. 10.1007/s10482-024-02001-8

By:

Khan, Inam Ullah;
Saqib, Muhammad;
Amin, Arshia;
Manzoor, Sadia;
Ahmed, Iftikhar;
Liu, Rui-Rui;
Jiao, Jian-Yu;
Zhi, Xiao-Yang;
Li, Wen-Jun

Publication type:

Article

Comparative genomics analysis of pKF3-94 in Klebsiella pneumoniae reveals plasmid compatibility and horizontal gene transfer.

Published in:

Frontiers in Microbiology, 2015, p. 1, doi. 10.3389/fmicb.2015.00831

By:

Jianchao Ying;
Songquan Wu;
Kaibo Zhang;
Ziqiang Wang;
Wen Zhu;
Mei Zhu;
Ying Zhang;
Cong Cheng;
Huifeng Wang;
Huifen Tou;
Chuanxin Zhu;
Peizhen Li;
Jun Ying;
Teng Xu;
Huiguang Yi;
Jinsong Li;
Liyan Ni;
Zuyuan Xu;
Qiyu Bao;
Junwan Lu

Publication type:

Article

The Integration of Genome Mining, Comparative Genomics, and Functional Genetics for Biosynthetic Gene Cluster Identification.

Published in:

Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.600116

By:

Williams, Ashley N.;
Sorout, Naveen;
Cameron, Alexander J.;
Stavrinides, John

Publication type:

Article

Comparative genomics analyses revealed two virulent Listeria monocytogenes strains isolated from ready-to-eat food.

Published in:

Gut Pathogens, 2016, v. 8, p. 1, doi. 10.1186/s13099-016-0147-8

By:

Shu Yong Lim;
Kien-Pong Yap;
Kwai Lin Thong

Publication type:

Article

Comparative genomic analysis of Shiga toxin-producing and non-Shiga toxin-producing Escherichia coli O157 isolated from outbreaks in Korea.

Published in:

Gut Pathogens, 2017, v. 9, p. 1, doi. 10.1186/s13099-017-0156-2

By:

Taesoo Kwon;
Won Kim;
Seung-Hak Cho

Publication type:

Article

Comparative genomic analysis of Mycobacterium intracellulare: implications for clinical taxonomic classification in pulmonary Mycobacterium avium-intracellulare complex disease.

Published in:

BMC Microbiology, 2021, v. 21, n. 1, p. 1, doi. 10.1186/s12866-021-02163-9

By:

Tateishi, Yoshitaka;
Ozeki, Yuriko;
Nishiyama, Akihito;
Miki, Mari;
Maekura, Ryoji;
Fukushima, Yukari;
Nakajima, Chie;
Suzuki, Yasuhiko;
Matsumoto, Sohkichi

Publication type:

Article

Comparative genomic analyses reveal broad diversity in botulinum-toxinproducing Clostridia.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2502-z

By:

Williamson, Charles H. D.;
Sahl, Jason W.;
Smith, Theresa J.;
Xie, Gary;
Foley, Brian T.;
Smith, Leonard A.;
Fernández, Rafael A.;
Lindström, Miia;
Korkeala, Hannu;
Keim, Paul;
Foster, Jeffrey;
Hill, Karen

Publication type:

Article

Comparative genomics of metabolic capacities of regulons controlled by cis-regulatory RNA motifs in bacteria.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-597

By:

Sun, Eric I.;
Leyn, Semen A.;
Kazanov, Marat D.;
Saier Jr., Milton H.;
Novichkov, Pavel S.;
Rodionov, Dmitry A.

Publication type:

Article