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RANKING VALID TOPOLOGIES OF THE SECONDARY STRUCTURE ELEMENTS USING A CONSTRAINT GRAPH.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 3, p. 415, doi. 10.1142/S0219720011005604
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SRMBUILDER:: A USER-FRIENDLY TOOL FOR SELECTED REACTION MONITORING DATA ANALYSIS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. 51, doi. 10.1142/S0219720011005756
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INTRODUCTION - The First IEEE Conference on Healthcare Informatics, Imaging, and Systems biology HISB'11.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 5, p. v, doi. 10.1142/S0219720011005719
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FOLDING ELASTIC TRANSMEMBRANE HELICES TO FIT IN A LOW-RESOLUTION IMAGE BY ELECTRON MICROSCOPY.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. 37, doi. 10.1142/S0219720011005720
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DISCOVERY AND EVALUATION OF POTENTIAL SONIC HEDGEHOG SIGNALING PATHWAY INHIBITORS USING PHARMACOPHORE MODELING AND MOLECULAR DYNAMICS SIMULATIONS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. 15, doi. 10.1142/S0219720011005732
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A TRANSCRIPTOME ANALYSIS BY LASSO PENALIZED COX REGRESSION FOR PANCREATIC CANCER SURVIVAL.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. 63, doi. 10.1142/S0219720011005744
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CSCORE:: A SIMPLE YET EFFECTIVE SCORING FUNCTION FOR PROTEIN-LIGAND BINDING AFFINITY PREDICTION USING MODIFIED CMAC LEARNING ARCHITECTURE.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. 1, doi. 10.1142/S021972001100577X
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INFERENCE OF S-SYSTEM MODELS OF GENE REGULATORY NETWORKS USING IMMUNE ALGORITHM.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. 75, doi. 10.1142/S0219720011005768
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A NEW GENOTYPE CALLING METHOD FOR AFFYMETRIX SNP ARRAYS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 715, doi. 10.1142/S0219720011005458
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INTRODUCTION - Progresses in Genome Informatics.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. v, doi. 10.1142/S0219720011005823
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SEQUENTIAL LINEAR NEIGHBORHOOD PROPAGATION FOR SEMI-SUPERVISED PROTEIN FUNCTION PREDICTION.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 663, doi. 10.1142/S0219720011005550
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USING BINDING PROFILES TO PREDICT BINDING SITES OF TARGET RNAs.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 697, doi. 10.1142/S0219720011005628
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VERIFICATION OF PHYLOGENETIC INFERENCE PROGRAMS USING METAMORPHIC TESTING.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 729, doi. 10.1142/S021972001100563X
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A GRAPH-BASED SEMANTIC SIMILARITY MEASURE FOR THE GENE ONTOLOGY.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 681, doi. 10.1142/S0219720011005641
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COMPARISON OF TWO ACADEMIC SOFTWARE PACKAGES FOR ANALYZING TWO-DIMENSIONAL GEL IMAGES.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 775, doi. 10.1142/S0219720011005665
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INTRODUCTION - Some New Results and Tools for Protein Function Prediction, RNA Target Site Prediction, Genotype Calling, Environmental Genomics, and More.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. v, doi. 10.1142/S021972001100580X
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JAGUC - A SOFTWARE PACKAGE FOR ENVIRONMENTAL DIVERSITY ANALYSES.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 749, doi. 10.1142/S0219720011005781
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HOW TO CHOOSE A NORMALIZATION STRATEGY FOR MIRNA QUANTITATIVE REAL-TIME (QPCR) ARRAYS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 795, doi. 10.1142/S0219720011005793
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PATTERNS OF HYDROPHOBICITY FOUND IN THE FIRST AND SECOND TRANSMEMBRANE DOMAINS OF SOLUTE TRANSPORTERS SUGGEST A POSSIBLE ROLE IN NASCENT PROTEIN ANCHORING AND ORGANIZATION.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 471, doi. 10.1142/S0219720011005367
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AUTHOR INDEX Volume 9 (2011).
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 813, doi. 10.1142/S0219720011005811
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- Article
SEQUENCE-BASED ENZYME CATALYTIC DOMAIN PREDICTION USING CLUSTERING AND AGGREGATED MUTUAL INFORMATION CONTENT.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 5, p. 597, doi. 10.1142/S0219720011005677
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A COMPRESSED SENSING BASED APPROACH FOR SUBTYPING OF LEUKEMIA FROM GENE EXPRESSION DATA.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 5, p. 631, doi. 10.1142/S0219720011005689
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QUANTITATIVE MODELING OF THE SACCHAROMYCES CEREVISIAE FLR1 REGULATORY NETWORK USING AN S-SYSTEM FORMALISM.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 5, p. 613, doi. 10.1142/S0219720011005690
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A SYSTEMS BIOLOGY APPROACH FOR DETECTING TOXICITY-RELATED HOTSPOTS INSIDE PROTEIN INTERACTION NETWORKS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 5, p. 647, doi. 10.1142/S0219720011005707
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THE 5TH INTERNATIONAL CONFERENCE ON BIO-INSPIRED MODELS OF NETWORK, INFORMATION AND COMPUTING SYSTEMS (BIONETICS 2010) SPECIAL TRACK ON BIOINFORMATICS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 3, p. v, doi. 10.1142/S0219720011005616
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COMPUTATIONAL CHALLENGES OF TUMOR SPHEROID MODELING.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 559, doi. 10.1142/S0219720011005379
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A METHODOLOGY BASED ON MOLECULAR INTERACTIONS AND PATHWAYS TO FIND CANDIDATE GENES ASSOCIATED TO DISEASES:: ITS APPLICATION TO SCHIZOPHRENIA AND ALZHEIMER'S DISEASE.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 541
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IDENTIFYING AND RECONSTRUCTING LATERAL TRANSFERS FROM DISTANCE MATRICES BY COMBINING THE MINIMUM CONTRADICTION METHOD AND NEIGHBOR-NET.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 453, doi. 10.1142/S0219720011005409
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VISUALIZATION IN SIMULATION TOOLS:: REQUIREMENTS AND A TOOL SPECIFICATION TO SUPPORT THE TEACHING OF DYNAMIC BIOLOGICAL PROCESSES.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 579
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- Article
SVM-BASED METHOD FOR PROTEIN STRUCTURAL CLASS PREDICTION USING SECONDARY STRUCTURAL CONTENT AND STRUCTURAL INFORMATION OF AMINO ACIDS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 489, doi. 10.1142/S0219720011005422
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TRANSFER LEARNING FOR CYTOCHROME P450 ISOZYME SELECTIVITY PREDICTION.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 521, doi. 10.1142/S0219720011005434
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ASSOCIATION OF FEATURE GENE EXPRESSION WITH STRUCTURAL FINGERPRINTS OF CHEMICAL COMPOUNDS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. 503, doi. 10.1142/S0219720011005446
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BRIEF INTRODUCTION TO SOME NEW PAPERS ON LATERAL TRANSFER RECONSTRUCTION, DRUG CANDIDATE SCREENING, DISEASE GENE IDENTIFICATION, AND OTHER RESULTS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 4, p. v, doi. 10.1142/S0219720011005653
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OPTIMAL PAIRWISE ALIGNMENT OF FIXED PROTEIN STRUCTURES IN SUBQUADRATIC TIME.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 3, p. 367, doi. 10.1142/S0219720011005562
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IN SEARCH OF THE PROTEIN NATIVE STATE WITH A PROBABILISTIC SAMPLING APPROACH.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 3, p. 383, doi. 10.1142/S0219720011005574
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A TWO-STAGE EVOLUTIONARY APPROACH FOR EFFECTIVE CLASSIFICATION OF HYPERSENSITIVE DNA SEQUENCES.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 3, p. 399, doi. 10.1142/S0219720011005586
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- Article
A METHOD FOR THE DETECTION OF MEANINGFUL AND REPRODUCIBLE GROUP SIGNATURES FROM GENE EXPRESSION PROFILES.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 3, p. 431, doi. 10.1142/S0219720011005598
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SIMULATION OF CELL MOVEMENT AND INTERACTION.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 1, p. 91, doi. 10.1142/S0219720011005318
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CLASSIFICATION OF LARGE MICROARRAY DATASETS USING FAST RANDOM FOREST CONSTRUCTION.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 251, doi. 10.1142/S021972001100546X
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OPTIMIZATION OF THERAPEUTIC PROTEINS TO DELETE T-CELL EPITOPES WHILE MAINTAINING BENEFICIAL RESIDUE INTERACTIONS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 207, doi. 10.1142/S0219720011005471
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COMPARING MULTIPLE ChIP-SEQUENCING EXPERIMENTS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 269, doi. 10.1142/S0219720011005483
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ANALYZING MODULAR RNA STRUCTURE REVEALS LOW GLOBAL STRUCTURAL ENTROPY IN MICRORNA SEQUENCE.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 283, doi. 10.1142/S0219720011005495
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ncRNA CONSENSUS SECONDARY STRUCTURE DERIVATION USING GRAMMAR STRINGS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 317, doi. 10.1142/S0219720011005501
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LEX-SVM:: EXPLORING THE POTENTIAL OF EXON EXPRESSION PROFILING FOR DISEASE CLASSIFICATION.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 299, doi. 10.1142/S0219720011005513
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TEMPORAL GRAPHICAL MODELS FOR CROSS-SPECIES GENE REGULATORY NETWORK DISCOVERY.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 231, doi. 10.1142/S0219720011005525
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INTRODUCTION:: ADVANCES IN COMPUTATIONAL SYSTEMS BIOINFORMATICS.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. v, doi. 10.1142/S0219720011005537
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INFERRING HAPLOTYPES FROM GENOTYPES ON A PEDIGREE WITH MUTATIONS, GENOTYPING ERRORS AND MISSING ALLELES.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 339, doi. 10.1142/S0219720011005549
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PREDICTION OF THE EXPOSURE STATUS OF TRANSMEMBRANE BETA BARREL RESIDUES FROM PROTEIN SEQUENCE.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 1, p. 43, doi. 10.1142/S0219720011005240
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ENHANCING BIOLOGICAL RELEVANCE OF A WEIGHTED GENE CO-EXPRESSION NETWORK FOR FUNCTIONAL MODULE IDENTIFICATION.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 1, p. 111, doi. 10.1142/S0219720011005252
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- Article
THE JANUS-FACED E-VALUES OF HMMER2:: EXTREME VALUE DISTRIBUTION OR LOGISTIC FUNCTION?
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 1, p. 179, doi. 10.1142/S0219720011005264
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