Works matching DE "HOMOLOGY (Biochemistry)"

Results: 748

Molecular docking and ex vivo pharmacological evaluation of constituents of the leaves of Cleistanthus collinus (Roxb.) (Euphorbiaceae).

Published in:

Indian Journal of Pharmacology, 2012, v. 44, n. 2, p. 197, doi. 10.4103/0253-7613.93848

By:

Parasuraman, Subramani;
Raveendran, Ramasamy;
Vijayakumar, Balakrishnan;
Velmurugan, Devadasan;
Balamurugan, Subramani

Publication type:

Article

A Single-Strand Annealing Protein Clamps DNA to Detect and Secure Homology.

Published in:

PLoS Biology, 2015, v. 13, n. 8, p. 1, doi. 10.1371/journal.pbio.1002213

By:

Ander, Marcel;
Subramaniam, Sivaraman;
Fahmy, Karim;
Stewart, A. Francis;
Schäffer, Erik

Publication type:

Article

DRUG TARGET PRIORITIZATION IN PLASMODIUM FALCIPARUM THROUGH METABOLIC NETWORK ANALYSIS, AND INHIBITOR DESIGNING USING VIRTUAL SCREENING AND DOCKING APPROACH.

Published in:

Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 4, p. -1, doi. 10.1142/S0219720013500030

By:

YADAV, MANOJ KUMAR;
PANDEY, SAURABH KUMAR;
SWATI, D.

Publication type:

Article

Characterization of an inhibitor-resistant endo-1,4-β-mannanase from the gut microflora metagenome of Hermetia illucens.

Published in:

Biotechnology Letters, 2018, v. 40, n. 9/10, p. 1377, doi. 10.1007/s10529-018-2596-2

By:

Song, Jaeeun;
Kim, Su-Yeon;
Kim, Dae-Hyuk;
Lee, Young-Seok;
Sim, Joon-Soo;
Hahn, Bum-Soo;
Lee, Chang-Muk

Publication type:

Article

Residue Phe42 is critical for the catalytic activity of Escherichia coli major nitroreductase NfsA.

Published in:

Biotechnology Letters, 2013, v. 35, n. 10, p. 1693, doi. 10.1007/s10529-013-1262-y

By:

Yang, Jun;
Zhan, Junfei;
Bai, Jing;
Liu, Peiyu;
Xue, Yingjiao;
Yang, Qing

Publication type:

Article

Evaluation of cytotoxicity of 5- n-alkylresorcinol homologs and fraction on mouse fibroblast cell line L929.

Published in:

European Food Research & Technology, 2017, v. 243, n. 7, p. 1137, doi. 10.1007/s00217-016-2827-5

By:

Biskup, Izabela;
Zaczynska, Ewa;
Krauze-Baranowska, Miroslawa;
Fecka, Izabela

Publication type:

Article

Characterization of new strain Lactobacillus paracasei I-N-10 with proteolytic activity: Potential role in decrease in β-casein immuno-reactivity.

Published in:

European Food Research & Technology, 2012, v. 235, n. 3, p. 447, doi. 10.1007/s00217-012-1772-1

By:

Hadji Sfaxi, Imen;
El-Ghaish, Shady;
Ahmadova, Aynur;
Rabesona, Hanitra;
Haertlé, Thomas;
Chobert, Jean-Marc

Publication type:

Article

Improved prediction of residue flexibility by embedding optimized amino acid grouping into RSA-based linear models.

Published in:

Amino Acids, 2014, v. 46, n. 12, p. 2665, doi. 10.1007/s00726-014-1817-9

By:

Zhang, Hua;
Kurgan, Lukasz

Publication type:

Article

Generation of a biotinylatable Sox2 mouse model to identify Sox2 complexes in vivo.

Published in:

Transgenic Research, 2018, v. 27, n. 1, p. 75, doi. 10.1007/s11248-018-0058-1

By:

Schilders, Kim;
Eenjes, Evelien;
Edel, Gabriëla;
de Munck, Anne Boerema;
van Kempen, Marjon Buscop;
Demmers, Jeroen;
Wijnen, René;
Tibboel, Dick;
Rottier, Robbert J.

Publication type:

Article

Targeting CARM1 in ovarian cancer with EZH2 and PARP inhibitors.

Published in:

Molecular & Cellular Oncology, 2020, v. 7, n. 4, p. 1, doi. 10.1080/23723556.2020.1760675

By:

Karakashev, Sergey;
Zhang, Rugang

Publication type:

Article

Epigenetic synthetic lethality in ovarian clear cell carcinoma: EZH2 and ARID1A mutations.

Published in:

Molecular & Cellular Oncology, 2016, v. 3, n. 1, p. 1, doi. 10.1080/23723556.2015.1032476

By:

Bitler, Benjamin G;
Aird, Katherine M;
Zhang, Rugang

Publication type:

Article

Homeobox transcription factor DLX4 is not necessary for skin development and homeostasis.

Published in:

Experimental Dermatology, 2018, v. 27, n. 3, p. 289, doi. 10.1111/exd.13503

By:

Bhattacharya, Shreya;
Duverger, Olivier;
Brooks, Stephen R.;
Morasso, Maria I.

Publication type:

Article

Molecular and Mechanistic Characterization of PddB, the First PLP-Independent 2,4-Diaminobutyric Acid Racemase Discovered in an Actinobacterial D-Amino Acid Homopolymer Biosynthesis.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.686023

By:

Yamanaka, Kazuya;
Ozaki, Ryo;
Hamano, Yoshimitsu;
Oikawa, Tadao

Publication type:

Article

A novel kinase function of a nucleoside‐diphosphate‐kinase homologue in Porphyromonas gingivalis is critical in subversion of host cell apoptosis by targeting heat‐shock protein 27.

Published in:

Cellular Microbiology, 2018, v. 20, n. 5, p. 1, doi. 10.1111/cmi.12825

By:

Lee, Jungnam;
Roberts, JoAnn S.;
Atanasova, Kalina R.;
Chowdhury, Nityananda;
Yilmaz, Özlem

Publication type:

Article

Complementary function of two transketolase isoforms from Moniliella megachiliensis in relation to stress response.

Published in:

AMB Express, 2017, v. 7, n. 1, p. 1, doi. 10.1186/s13568-017-0342-0

By:

Iwata, Hisashi;
Kobayashi, Yosuke;
Mizushima, Daiki;
Watanabe, Taisuke;
Ogihara, Jun;
Kasumi, Takafumi

Publication type:

Article

Improvement in xylooligosaccharides production by knockout of the β- xyl1 gene in Trichoderma orientalis EU7-22.

Published in:

3 Biotech, 2017, v. 8, n. 1, p. 1, doi. 10.1007/s13205-017-1041-x

By:

Long, Chuannan;
Cui, Jingjing;
Li, Hailong;
Liu, Jian;
Gan, Lihui;
Zeng, Bin;
Long, Minnan

Publication type:

Article

Iterative tyrosine phosphorylation controls non-canonical domain utilization in Crk.

Published in:

Oncogene, 2015, v. 34, n. 32, p. 4260, doi. 10.1038/onc.2014.361

By:

Sriram, G;
Jankowski, W;
Kasikara, C;
Reichman, C;
Saleh, T;
Nguyen, K-Q;
Li, J;
Hornbeck, P;
Machida, K;
Liu, T;
Li, H;
Kalodimos, C G;
Birge, R B

Publication type:

Article

Binding Specificity of Two PBPs in the Yellow Peach Moth Conogethes punctiferalis (Guenée).

Published in:

Frontiers in Physiology, 2018, p. 1, doi. 10.3389/fphys.2018.00308

By:

Ge, Xing;
Ahmed, Tofael;
Zhang, Tiantao;
Wang, Zhenying;
He, Kanglai;
Bai, Shuxiong

Publication type:

Article

A Critical Note on Symmetry Contact Artifacts and the Evaluation of the Quality of Homology Models.

Published in:

Symmetry (20738994), 2018, v. 10, n. 1, p. 25, doi. 10.3390/sym10010025

By:

Singh, Dipali;
Berntsen, Karen R. M.;
Baakman, Coos;
Vriend, Gert;
Lahiri, Tapobrata

Publication type:

Article

Genomic and transcriptional analysis of genes containing fibrinogen and IgSF domains in the schistosome vector Biomphalaria glabrata, with emphasis on the differential responses of snails susceptible or resistant to Schistosoma mansoni.

Published in:

PLoS Neglected Tropical Diseases, 2020, p. 1, doi. 10.1371/journal.pntd.0008780

By:

Lu, Lijun;
Loker, Eric S.;
Adema, Coen M.;
Zhang, Si-Ming;
Bu, Lijing

Publication type:

Article

Evaluation of autologous and homologous platelet rich plasma as a surgical wound healing promoter in rabbits.

Published in:

Indian Journal of Animal Research, 2018, v. 52, n. 7, p. 1068, doi. 10.18805/ijar.B-847

By:

Tahir, Muhammad Shahid;
Durrani, Uzma Farid;
Mahmood, Asim Khalid;
Akhtar, Raheela;
Hussain, Rashid;
Hussain, Abid;
Matloob, Khizar;
Zahid, Beenish

Publication type:

Article

CRISPR–Cas ribonucleoprotein mediated homology-directed repair for efficient targeted genome editing in microalgae Nannochloropsis oceanica IMET1.

Published in:

Biotechnology for Biofuels, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13068-019-1401-3

By:

Naduthodi, Mihris Ibnu Saleem;
Mohanraju, Prarthana;
Südfeld, Christian;
D'Adamo, Sarah;
Barbosa, Maria J.;
van der Oost, John

Publication type:

Article

mGluR5: Exploration of Orthosteric and Allosteric Ligand Binding Pockets and Their Applications to Drug Discovery.

Published in:

Neurochemical Research, 2014, v. 39, n. 10, p. 1862, doi. 10.1007/s11064-014-1248-8

By:

Mølck, Christina;
Harpsøe, Kasper;
Gloriam, David;
Mathiesen, Jesper;
Nielsen, Søren;
Bräuner-Osborne, Hans

Publication type:

Article

Revision of the Classical Dopamine D Agonist Pharmacophore Based on an Integrated Medicinal Chemistry, Homology Modelling and Computational Docking Approach.

Published in:

Neurochemical Research, 2014, v. 39, n. 10, p. 1997, doi. 10.1007/s11064-014-1314-2

By:

Krogsgaard-Larsen, N.;
Harpsøe, K.;
Kehler, J.;
Christoffersen, C.;
Brøsen, P.;
Balle, T.

Publication type:

Article

Insight into the interaction mechanism of human SGLT2 with its inhibitors: 3D-QSAR studies, homology modeling, and molecular docking and molecular dynamics simulations.

Published in:

Journal of Molecular Modeling, 2018, v. 24, n. 4, p. 1, doi. 10.1007/s00894-018-3582-2

By:

Dong, Lili;
Feng, Ruirui;
Bi, Jiawei;
Shen, Shengqiang;
Lu, Huizhe;
Zhang, Jianjun

Publication type:

Article

Dynamical persistence of active sites identified in maltose-binding protein.

Published in:

Journal of Molecular Modeling, 2017, v. 23, n. 5, p. 1, doi. 10.1007/s00894-017-3344-6

By:

Nikolić, Dragan;
Kovačev-Nikolić, Violeta

Publication type:

Article

Structural difficulty index: a reliable measure for modelability of protein tertiary structures.

Published in:

PEDS: Protein Engineering, Design & Selection, 2016, v. 29, n. 9, p. 391, doi. 10.1093/protein/gzw025

By:

Kaushik, Rahul;
Jayaram, B.

Publication type:

Article

Studying protein fold evolution with hybrids of differently folded homologs.

Published in:

PEDS: Protein Engineering, Design & Selection, 2015, v. 28, n. 8, p. 241, doi. 10.1093/protein/gzv027

By:

Eaton, Karen V.;
Anderson, William J.;
Dubrava, Matthew S.;
Kumirov, Vlad K.;
Dykstra, Emily M.;
Cordes, Matthew H. J.

Publication type:

Article

Reliable and robust detection of coevolving protein residues†.

Published in:

PEDS: Protein Engineering, Design & Selection, 2012, v. 25, n. 11, p. 705, doi. 10.1093/protein/gzs081

By:

Jeong, Chan-Seok;
Kim, Dongsup

Publication type:

Article

Genetic, Structural, and Functional Evidence Link TMEM175 to Synucleinopathies.

Published in:

2020

By:

Krohn, Lynne;
Öztürk, Tuğba Nur;
Vanderperre, Benoît;
Ouled Amar Bencheikh, Bouchra;
Ruskey, Jennifer A.;
Laurent, Sandra B.;
Spiegelman, Dan;
Postuma, Ronald B.;
Arnulf, Isabelle;
Hu, Michele T. M.;
Dauvilliers, Yves;
Högl, Birgit;
Stefani, Ambra;
Monaca, Christelle Charley;
Plazzi, Giuseppe;
Antelmi, Elena;
Ferini‐Strambi, Luigi;
Heidbreder, Anna;
Rudakou, Uladzislau;
Cochen De Cock, Valérie

Publication type:

journal article

Therapeutic potential of Stigmasterol and Kaempferol on multidrug-resistant malaria.

Published in:

Indian Journal of Biochemistry & Biophysics, 2024, v. 61, n. 4, p. 197, doi. 10.56042/ijbb.v61i4.6438

By:

Taiwo, Idowu A.;
Oyejide, Stephen O.

Publication type:

Article

The design of a new truncated and engineered alpha1-antitrypsin based on theoretical studies: an antiprotease therapeutics for pulmonary diseases.

Published in:

Theoretical Biology & Medical Modelling, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1742-4682-10-36

By:

Pirooznia, Nazanin;
Hasannia, Sadegh;
Shahriar Arab, Seyed;
Sahebghadam Lotfi, Abbas;
Ghanei, Mostafa;
Shali, Abbas

Publication type:

Article

Comparative sequence and structure analysis of eIF1A and eIF1AD.

Published in:

BMC Structural Biology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12900-018-0091-6

By:

Yu, Jielin;
Marintchev, Assen

Publication type:

Article

An improved protein structure evaluation using a semi-empirically derived structure property.

Published in:

BMC Structural Biology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12900-018-0097-0

By:

Pal, Manoj Kumar;
Lahiri, Tapobrata;
Tanwar, Garima;
Kumar, Rajnish

Publication type:

Article

Structural adaptation of extreme halophilic proteins through decrease of conserved hydrophobic contact surface.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 50, doi. 10.1186/1472-6807-11-50
Publication type:: Article

TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pcbi.1005690

By:

Cang, Zixuan;
Wei, Guowei

Publication type:

Article

On curves in K-theory and TR.

Published in:

Journal of the European Mathematical Society (EMS Publishing), 2024, v. 26, n. 11, p. 4315, doi. 10.4171/JEMS/1347

By:

McCandless, Jonas

Publication type:

Article

The glioma-associated oncogene homolog 1 promotes epithelial-mesenchymal transition in human esophageal squamous cell cancer by inhibiting E-cadherin via Snail.

Published in:

Cancer Gene Therapy, 2013, v. 20, n. 7, p. 379, doi. 10.1038/cgt.2013.36

By:

S. Min;
X. Xiaoyan;
P. Fanghui;
W. Yamei;
Y. Xiaoli;
W. Feng

Publication type:

Article

Interaction of the middle domains stabilizes Hsp90α dimer in a closed conformation with high affinity for p23.

Published in:

Biological Chemistry, 2018, v. 399, n. 4, p. 337, doi. 10.1515/hsz-2017-0172

By:

Synoradzki, Kamil;
Miszta, Przemyslaw;
Kazlauskas, Egidijus;
Mickevičiūtė, Aurelija;
Michailovienė, Vilma;
Matulis, Daumantas;
Filipek, Slawomir;
Bieganowski, Pawel

Publication type:

Article

A FACS-based screening strategy to assess sequence-specific RNA-binding of Pumilio protein variants in E. coli.

Published in:

Biological Chemistry, 2017, v. 398, n. 1, p. 69, doi. 10.1515/hsz-2016-0214

By:

Kellermann, Stefanie J.;
Rentmeister, Andrea

Publication type:

Article

When two turn into one: evolution of membrane transporters from half modules.

Published in:

Biological Chemistry, 2014, v. 395, n. 12, p. 1379, doi. 10.1515/hsz-2014-0224

By:

Keller, Rebecca;
Ziegler, Christine;
Schneider, Dirk

Publication type:

Article

Homology model of human prothrombinase based on the crystal structure of Pseutarin C.

Published in:

Biological Chemistry, 2014, v. 395, n. 10, p. 1233, doi. 10.1515/hsz-2014-0165

By:

Pomowski, Anja;
Ustok, Fatma Isik;
Huntington, James A.

Publication type:

Article

SH3-mediated targeting of Wrch1/RhoU by multiple adaptor proteins.

Published in:

Biological Chemistry, 2013, v. 394, n. 3, p. 421, doi. 10.1515/hsz-2012-0246

By:

Risse, Sarah L.;
Vaz, Belen;
Burton, Matthew F.;
Aspenström, Pontus;
Piekorz, Roland P.;
Brunsveld, Luc;
Ahmadian, Mohammad R.

Publication type:

Article

Substrate-induced rearrangements in glutamate-transporter homologs.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1142, doi. 10.1038/nsmb.2685

By:

Kanner, Baruch I

Publication type:

Article

Structural basis for substrate transport in the GLUT-homology family of monosaccharide transporters.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 6, p. 766, doi. 10.1038/nsmb.2569

By:

Quistgaard, Esben M;
Löw, Christian;
Moberg, Per;
Trésaugues, Lionel;
Nordlund, Pär

Publication type:

Article

From pseudo-ceRNAs to circ-ceRNAs: a tale of cross-talk and competition.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 5, p. 541, doi. 10.1038/nsmb.2580

By:

Taulli, Riccardo;
Loretelli, Cristian;
Pandolfi, Pier Paolo

Publication type:

Article

Multimodal microtubule binding by the Ndc80 kinetochore complex.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 11, p. 1161, doi. 10.1038/nsmb.2411

By:

Alushin, Gregory M;
Musinipally, Vivek;
Matson, Daniel;
Tooley, John;
Stukenberg, P Todd;
Nogales, Eva

Publication type:

Article

Proofreading of pre-40S ribosome maturation by a translation initiation factor and 60S subunits.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 8, p. 744, doi. 10.1038/nsmb.2308

By:

Lebaron, Simon;
Schneider, Claudia;
van Nues, Robert W;
Swiatkowska, Agata;
Walsh, Dietrich;
Böttcher, Bettina;
Granneman, Sander;
Watkins, Nicholas J;
Tollervey, David

Publication type:

Article

EZH2-Induced H3K27me3 is Associated with Epigenetic Repression of the ARHI Tumor-Suppressor Gene in Ovarian Cancer.

Published in:

Cell Biochemistry & Biophysics, 2015, v. 71, n. 1, p. 105, doi. 10.1007/s12013-014-0168-1

By:

Fu, Yibing;
Chen, Jing;
Pang, Bo;
Li, Chunyan;
Zhao, Jing;
Shen, Keng

Publication type:

Article

Interaction Between Umami Peptide and Taste Receptor T1R1/T1R3.

Published in:

Cell Biochemistry & Biophysics, 2014, v. 70, n. 3, p. 1841, doi. 10.1007/s12013-014-0141-z

By:

Dang, Yali;
Gao, Xinchang;
Xie, Aiying;
Wu, Xueqian;
Ma, Fumin

Publication type:

Article