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North Sea spring bloom-associated Gammaproteobacteria fill diverse heterotrophic niches.
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- Environmental Microbiome, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s40793-021-00385-y
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- Article
Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms.
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- eLife, 2016, p. 1, doi. 10.7554/eLife.11888
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- Article
Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 6, p. 1410, doi. 10.1038/ismej.2014.225
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- Article
Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes 'Gramella forsetii' KT0803.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 7, p. 1492, doi. 10.1038/ismej.2014.4
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Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 5, p. 918, doi. 10.1038/ismej.2010.180
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- Article
Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 1, p. 107, doi. 10.1038/ismej.2010.94
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Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 7, p. 882, doi. 10.1038/ismej.2010.6
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- Article
Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2007, v. 1, n. 5, p. 419, doi. 10.1038/ismej.2007.63
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Current opportunities and challenges in microbial metagenome analysis—a bioinformatic perspective.
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- Briefings in Bioinformatics, 2012, v. 13, n. 6, p. 728, doi. 10.1093/bib/bbs039
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RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits.
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- BMC Bioinformatics, 2006, v. 7, p. 66, doi. 10.1186/1471-2105-7-66
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- Article
TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences.
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- BMC Bioinformatics, 2004, v. 5, p. 163, doi. 10.1186/1471-2105-5-163
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Symbiosis insights through metagenomic analysis of a microbial consortium.
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- Nature, 2006, v. 443, n. 7114, p. 950, doi. 10.1038/nature05192
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- Article
Particle-attached bacteria act as gatekeepers in the decomposition of complex phytoplankton polysaccharides.
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- Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01757-5
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- Article
Megx.net—database resources for marine ecological genomics.
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- Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d390, doi. 10.1093/nar/gkj070
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- Article
Epiphytic common core bacteria in the microbiomes of co-located green (Ulva), brown (Saccharina) and red (Grateloupia, Gelidium) macroalgae.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01559-1
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Dissolved storage glycans shaped the community composition of abundant bacterioplankton clades during a North Sea spring phytoplankton bloom.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01517-x
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- Article
Alpha‐ and beta‐mannan utilization by marine Bacteroidetes.
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- Environmental Microbiology, 2018, v. 20, n. 11, p. 4127, doi. 10.1111/1462-2920.14414
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- Article
Genomic and physiological analyses of ' Reinekea forsetii' reveal a versatile opportunistic lifestyle during spring algae blooms.
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- Environmental Microbiology, 2017, v. 19, n. 3, p. 1209, doi. 10.1111/1462-2920.13646
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Polysaccharide utilisation loci of Bacteroidetes from two contrasting open ocean sites in the North Atlantic.
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- Environmental Microbiology, 2016, v. 18, n. 12, p. 4456, doi. 10.1111/1462-2920.13429
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- Article
Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans Dsij<sup>T</sup>.
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- Environmental Microbiology, 2016, v. 18, n. 12, p. 4610, doi. 10.1111/1462-2920.13584
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Dilution cultivation of marine heterotrophic bacteria abundant after a spring phytoplankton bloom in the North Sea.
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- Environmental Microbiology, 2015, v. 17, n. 10, p. 3515, doi. 10.1111/1462-2920.12479
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- Article
The gill chamber epibiosis of deep-sea shrimp R imicaris exoculata: an in-depth metagenomic investigation and discovery of Z etaproteobacteria.
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- Environmental Microbiology, 2014, v. 16, n. 9, p. 2723, doi. 10.1111/1462-2920.12406
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H alorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader.
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- Environmental Microbiology, 2014, v. 16, n. 8, p. 2525, doi. 10.1111/1462-2920.12393
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Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study.
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- Environmental Microbiology, 2012, v. 14, n. 1, p. 268, doi. 10.1111/j.1462-2920.2011.02634.x
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Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean.
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- Environmental Microbiology, 2012, v. 14, n. 1, p. 52, doi. 10.1111/j.1462-2920.2011.02555.x
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Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group.
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- Environmental Microbiology, 2010, v. 12, n. 2, p. 422, doi. 10.1111/j.1462-2920.2009.02083.x
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Comparative analysis of magnetosome gene clusters in magnetotactic bacteria provides further evidence for horizontal gene transfer.
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- Environmental Microbiology, 2009, v. 11, n. 5, p. 1267, doi. 10.1111/j.1462-2920.2009.01854.x
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Assessing diversity and biogeography of aerobic anoxygenic phototrophic bacteria in surface waters of the Atlantic and Pacific Oceans using the Global Ocean Sampling expedition metagenomes.
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- Environmental Microbiology, 2007, v. 9, n. 6, p. 1464, doi. 10.1111/j.1462-2920.2007.01265.x
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Whole genome analysis of the marine Bacteroidetes‘ Gramella forsetii’ reveals adaptations to degradation of polymeric organic matter.
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- Environmental Microbiology, 2006, v. 8, n. 12, p. 2201, doi. 10.1111/j.1462-2920.2006.01152.x
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Application of tetranucleotide frequencies for the assignment of genomic fragments.
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- Environmental Microbiology, 2004, v. 6, n. 9, p. 938, doi. 10.1111/j.1462-2920.2004.00624.x
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Alpha-glucans from bacterial necromass indicate an intra-population loop within the marine carbon cycle.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48301-5
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- Article
Archaea-Like Genes for C<sub>1</sub>-Transfer EnzymesinPlanctomycetes: Phylogenetic Implications of Their Unexpected Presence in This Phylum.
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- Journal of Molecular Evolution, 2004, v. 59, n. 5, p. 571, doi. 10.1007/s00239-004-2643-6
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Unveiling the role of novel carbohydrate‐binding modules in laminarin interaction of multimodular proteins from marine Bacteroidota during phytoplankton blooms.
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- Environmental Microbiology, 2024, v. 26, n. 5, p. 1, doi. 10.1111/1462-2920.16624
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Diatom fucan polysaccharide precipitates carbon during algal blooms.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21009-6
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