Works matching DE "SEQUENCE analysis"

Results: 5000

Genomic Landscape of Advanced Solid Tumors in Middle East and North Africa Using Circulating Tumor DNA in Routine Clinical Practice.

Published in:

Oncology, 2025, v. 103, n. 6, p. 508, doi. 10.1159/000541571

By:

Dawood, Shaheenah;
Sandhir, Nippun;
Akasheh, Marwan;
El Khoury, Maroun;
Otsmane, Sonia;
Alnassar, Muath;
Abulkhair, Omalkhair;
Farhat, Fadi;
Olsen, Steve

Publication type:

Article

Single-Tube Multiplex PCR-SSP for the Detection of RHD Variant Alleles Commonly Found in Serologically D− Phenotype Individuals in a Thai Population.

Published in:

Transfusion Medicine & Hemotherapy, 2025, v. 52, n. 3, p. 169, doi. 10.1159/000544107

By:

Pittayabumrung, Ornuma;
Leelayuwat, Chanvit;
Romphruk, Amornrat V.;
Simtong, Piyapong

Publication type:

Article

A Novel c.459_460insC Variation in the XK Gene Associated with McLeod Syndrome.

Published in:

Transfusion Medicine & Hemotherapy, 2025, v. 52, n. 3, p. 211, doi. 10.1159/000539875

By:

Zhang, Bing;
Yu, Shifang;
Hong, Xiaozhen;
Xu, Xianguo;
Zhu, Faming

Publication type:

Article

Effect on DNA Stability of a Novel Pellet Storing Method for Liquid-Based Cytology Specimens Fixed Using an Alcohol-Based Preservation Solution: Studies Using EGFR Mutation Detection on a Lung Adenocarcinoma Cell Line.

Published in:

Acta Cytologica, 2025, v. 69, n. 3, p. 259, doi. 10.1159/000545062

By:

Matsuo, Yukiko;
Yoshida, Tsutomu;
Yamashita, Kazuya;
Satoh, Yukitoshi

Publication type:

Article

RNA sequencing uncovers key players of cartilage calcification: potential implications for osteoarthritis pathogenesis Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3151, doi. 10.1093/rheumatology/keae587

By:

Bernabei, Ilaria;
Faure, Elodie;
Wegrzyn, Julien;
Bertheaume, Nicolas;
Falgayrac, Guillaume;
Hugle, Thomas;
Nasi, Sonia;
Busso, Nathalie

Publication type:

Article

Exploring genetic and immune cell dynamics in systemic lupus erythematosus patients with Epstein–Barr virus infection via machine learning.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 2656, doi. 10.1093/rheumatology/keae537

By:

Gui, Jiajun;
Fang, Mengyuan;
Tu, Jianxin;
Chen, Xiaowei;
Sun, Li

Publication type:

Article

Intestinal epithelial expression of human TNF is sufficient to induce small bowel inflammation and sacroiliitis, mimicking human spondyloarthritis.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3116, doi. 10.1093/rheumatology/keae507

By:

Debusschere, Karlijn;
Souza, Donald;
Nabozny, Gerald H;
Dumas, Emilie;
Verheugen, Eveline;
Coudenys, Julie;
Manuello, Teddy;
Stappers, Flore;
Decruy, Tine;
Maelegheer, Margaux;
Schryvers, Nadia;
Gilis, Elisabeth;
Elewaut, Dirk

Publication type:

Article

Majeed syndrome: first description in a patient of central-European ancestry Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3069, doi. 10.1093/rheumatology/keae480

By:

Drago, Enrico;
Bertoni, Arinna;
Grossi, Alice;
Damasio, Maria Beatrice;
Anfigeno, Lorenzo;
Miano, Maurizio;
Papa, Riccardo;
Volpi, Stefano;
Ceccherini, Isabella;
Gattorno, Marco;
Caorsi, Roberta

Publication type:

Article

Modifiable risk factors and inflammation-related proteins in polymyalgia rheumatica: genome-wide meta-analysis and Mendelian randomization Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3012, doi. 10.1093/rheumatology/keae308

By:

Zhao, Sizheng Steven;
Mackie, Sarah L;
Larsson, Susanna C;
Burgess, Stephen;
Yuan, Shuai

Publication type:

Article

Investigating the causal and genetic relationship between migraine and Parkinson's disease.

Published in:

Headache: The Journal of Head & Face Pain, 2025, v. 65, n. 5, p. 835, doi. 10.1111/head.14881

By:

Deng, Ming‐Gang;
Zhou, Xiuxiu;
Liu, Fang;
Wang, Kai;
Luo, Lingli;
Zhang, Min‐Jie;
Feng, Qianqian;
Liu, Jiewei

Publication type:

Article

Sequencing-Based Detection of Measles in Wastewater: Texas, January 2025.

Published in:

American Journal of Public Health, 2025, v. 115, n. 7, p. 1115, doi. 10.2105/AJPH.2025.308146

By:

Javornik Cregeen, Sara;
Tisza, Michael J.;
Hanson, Blake;
Cook, Marissa;
Surathu, Anil;
Schneider, Rebecca;
Wu, Jingjing;
Short, Kirstin;
Domakonda, Kaavya;
Hopkins, Loren;
Ross, Matthew C.;
Petrosino, Joseph F.;
Deegan, Jennifer;
Stadler, Lauren B.;
Boerwinkle, Eric;
Maresso, Anthony

Publication type:

Article

Integrative multi-omics investigation of sleep apnea: gut microbiome metabolomics, proteomics and phenome-wide association study.

Published in:

Nutrition & Metabolism, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12986-025-00925-0

By:

Wei, Shuxu;
Shen, Ronghuai;
Lu, Xiaojia;
Li, Xinyi;
He, Lingbin;
Zhang, Youti;
Huang, Xianxi;
Shu, Zhouwu

Publication type:

Article

Extraintestinal traits of pathogenicity and sequence type lineages in commensal Escherichia coli from adults and young children: genotypic and phenotypic profiles.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1579685

By:

Bok, Ewa;
Mazurek-Popczyk, Justyna;
Wojciech, Magdalena;
Baldy-Chudzik, Katarzyna

Publication type:

Article

The Complete Mitochondrial Genome Sequence and Phylogenetic Analysis of Saurogobio punctatus (Cypriniformes: Cyprinidae: Gobioninae).

Published in:

Pakistan Journal of Zoology, 2025, v. 57, n. 3, p. 1099, doi. 10.17582/journal.pjz/20220630110656

By:

Juan Guo;
Yu Zeng;
Jin Li;
Ling Mao;
Yu Shuang Zhao

Publication type:

Article

Astragalus polysaccharide protects against cardiac injury in a tnnt2a mutant zebrafish model of dilated cardiomyopathy.

Published in:

BMC Complementary Medicine & Therapies, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12906-025-04925-8

By:

Zhou, Chang;
Zhao, Hui;
Peng, Longping;
Dong, Yidan;
Wu, Qiong;
Wang, Xu;
Xu, Yingjia;
Wang, Youhua

Publication type:

Article

Improved sampling of genotypes and species reveals new insights on de novo gene history and regulatory origins.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf074

By:

Blair, Logan K;
Cridland, Julie M;
Luo, Yige;
Begun, David J;
Kopp, Artyom

Publication type:

Article

Pairing between homologous sequences on the X and chromosome 3 in Drosophila male meiosis.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf059

By:

Hylton, Christopher A;
Hansen, Katie;
Dean, John E Tomkiel

Publication type:

Article

The Role of blaOXA-101 and blaOXA-573 in Extensively Drug-Resistant/ Pan Drug-Resistant (XDR/PDR) Pseudomonas aeruginosa Resistance to Ceftazidime-Avibactam.

Published in:

Infection & Drug Resistance, 2025, v. 18, p. 2547, doi. 10.2147/IDR.S506452

By:

Kang, Yixin;
Cui, Junchang

Publication type:

Article

Molecular Characterization and Phylogenetic Analysis of Canine Parvovirus Type 2 (CPV-2) in the Aizawl Region of Mizoram Reveals Circulation of CPV-2c Antigenic Variant: A Hospital based Study.

Published in:

Indian Journal of Animal Research, 2025, v. 59, n. 6, p. 1012, doi. 10.18805/IJAR.B-4756

By:

Chethan, G. E.;
Kumar De, Ujjwal;
Roychoudhury, Parimal;
Rajkhowa, T. K.;
Singh, Mithilesh;
Prasad, H.;
Sarma, K.

Publication type:

Article

Morphological and molecular identification of fungi isolated from spoilt apples in Ota metropolis.

Published in:

BMC Microbiology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12866-025-04079-0

By:

Olumuyiwa, Emmanuel O.;
Ajetunmobi, Mobolaji T.;
Adeniji, Omolara F.;
Ogunyemi, Adewale K.

Publication type:

Article

Transcriptome Analysis of Porphyromonas gingivalis Lipopolysaccharide‐Induced Early Gene Expression in Human Gingival Keratinocytes.

Published in:

Journal of Periodontal Research, 2025, v. 60, n. 4, p. 380, doi. 10.1111/jre.13353

By:

Ostadkarampour, Mahyar;
Putnins, Edward E.

Publication type:

Article

Molecular and Clinical Study of Feline Infectious Peritonitis Virus in Iran Showing a Paraphyletic Tree: Emphasizing the "Internal Mutation" Hypothesis.

Published in:

Iranian Journal of Veterinary Medicine, 2025, v. 19, n. 2, p. 179, doi. 10.32598/ijvm.19.2.1005247

By:

Jamshidi, Shahram;
Momeni, Farnoosh;
Tamai, Iradj Ashrafi;
Madadgar, Omid

Publication type:

Article

Relationship between depression and oral microbiome diversity: analysis of NHANES data (2009–2012).

Published in:

BMC Oral Health, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12903-025-06274-x

By:

Qiu, Xichenhui;
Xu, Ting;
Huang, Yiqing;
Wei, Changning;
Wang, Lina;
Wu, Bei

Publication type:

Article

Construction of an early childhood caries risk prediction model based on the oral microbiome: a nested case‒control study.

Published in:

BMC Oral Health, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12903-025-06147-3

By:

Ho, Teck-Ek;
Yang, Yuan-Meng;
Gu, Wen-Jia;
Meng, Wen;
Chen, Xin-Yu;
Wu, Si-Cheng;
Lo, Edward Chin Man;
Li, Fei;
Lu, Hai-Xia

Publication type:

Article

Transcriptomic Profiles and Functional Correlates of Cancer‐Related Fatigue: A Cross‐Sectional Study in Women Undergoing Cancer Treatment.

Published in:

European Journal of Cancer Care, 2025, v. 2025, p. 1, doi. 10.1155/ecc/1092518

By:

Kleckner, Amber S.;
Mocci, Evelina;
Clingan, Carin L.;
Youngblood, Shari M.;
Rosenblatt, Paula Y.;
Tkaczuk, Katherine H. R.;
Kleckner, Ian R.;
Dorsey, Susan G.;
Sahgal, Pranshu

Publication type:

Article

Automatic activity-travel sequence generator using language, grammar, and machine theory.

Published in:

Transportation Letters, 2025, v. 17, n. 6, p. 1091, doi. 10.1080/19427867.2024.2416309

By:

Kachroo, Pushkin;
Koushik, Anil;
Manoj, M.

Publication type:

Article

Advancing Precision Oncology: Whole-Exome Sequencing in Endometrial Cancer Liquid-Based Cytology.

Published in:

Archives of Pathology & Laboratory Medicine, 2025, v. 149, n. 6, p. 561, doi. 10.5858/arpa.2024-0137-OA

By:

Reika Takamatsu;
Kohei Nakamura;
Tatsuyuki Chiyoda;
Kosuke Tsuji;
Ryutaro Kawano;
Naoki Yoshimi;
Wataru Yamagami;
Hiroshi Nishihara

Publication type:

Article

RETRACTION: Single‐Cell Transcriptome Sequencing Analysis Reveals Intra‐Tumor Heterogeneity in Esophageal Squamous Cell Carcinoma.

Published in:: 2025
Publication type:: Correction Notice

Tofacitinib treatment for active dermatomyositis and anti-synthetase syndrome: a prospective cohort pilot study.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 3756, doi. 10.1093/rheumatology/keaf046

By:

Xing, Xiaoyan;
Li, Yuhui;
Liu, Qinghong;
Wang, Naidi;
Zhang, Kai;
Mo, Wanxing;
Zhao, Liang;
Zhang, Jian;
Ma, Ke;
Zhao, Xuyang;
Lu, Dan;
He, Jing

Publication type:

Article

Distinct genetic risk loci between biopsy-proven renal and non-renal lupus: a 10-year longitudinal cohort.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 4005, doi. 10.1093/rheumatology/keaf027

By:

Chan, Shirley C W;
Lei, Yao;
Yap, Desmond Y H;
Lee, Pamela P W;
Lai, Wai Ming;
Ying, Shirley K Y;
Leung, Alexander M H;
Mok, Chi Chiu;
Lee, Ka Lai;
Lau, Chak Sing;
Yang, Wanling;
Li, Philip H

Publication type:

Article

A predictive model based on the gut microbiota improves the diagnostic effect in patients with rheumatoid arthritis.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 4014, doi. 10.1093/rheumatology/keae706

By:

Wang, Qi;
Li, Chen-Long;
Yu, Si-Yuan;
Dong, Hui-Jing;
Yang, Lei;
Liu, Yang;
He, Pei-Feng;
Zhang, Sheng-Xiao;
Yu, Qi

Publication type:

Article

Elevated Fcy receptor expression augments pro-inflammatory macrophage phagocytosis in systemic sclerosis and associated rheumatic diseases Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 3975, doi. 10.1093/rheumatology/keae688

By:

Hukara, Amela;
Bonazza, Gino A;
Tabib, Tracy;
Micheroli, Raphael;
Jordan, Suzana;
Bürki, Kristina;
Rudnik, Michal;
Ciurea, Adrian;
Distler, Oliver;
Lafyatis, Robert;
Błyszczuk, Przemysław;
Kania, Gabriela

Publication type:

Article

The lactylation–immune regulatory axis: a potential therapeutic target for migraine prevention and treatment.

Published in:

Journal of Headache & Pain, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s10194-025-02075-3

By:

Wang, Liu;
Lan, Zhixuan;
He, Ying;
Cheng, Yue;
He, Ruilin;
Jiang, Zongbin

Publication type:

Article

Emergence and Spread of Clostridioides difficile Isolates With Reduced Fidaxomicin Susceptibility in an Acute Care Hospital.

Published in:

Clinical Infectious Diseases, 2025, v. 80, n. 5, p. 984, doi. 10.1093/cid/ciaf028

By:

Redmond, Sarah N;
Cadnum, Jennifer L;
Jencson, Annette L;
Kaple, Claire E;
Wilson, Brigid M;
Skinner, Andrew M;
Gargis, Amy S;
Hwang, Munok;
Choi, Hosoon;
Chatterjee, Piyali;
Jinadatha, Chetan;
Donskey, Curtis J

Publication type:

Article

Progression From Carriage of Carbapenemase-Producing Enterobacterales to Bloodstream Infection Should Be Explored Through Assessment of Antibiotic Selective Pressure and Whole Genome Sequencing.

Published in:

2025

By:

Woerther, Paul-Louis;
Jacquier, Hervé;
Fihman, Vincent;
Decousser, Jean-Winoc

Publication type:

Letter to the Editor

Differentially expressed genes in the placentas with pre-eclampsia and fetal growth restriction using RNA sequencing and verification.

Published in:

Journal of Perinatal Medicine, 2025, v. 53, n. 5, p. 595, doi. 10.1515/jpm-2025-0025

By:

Chen, Haiying;
Li, Xiaoqing;
Xu, Xiaoming;
Hu, Yanjun;
Zheng, Jianqiong

Publication type:

Article

Upregulation of microRNA-3687 promotes gestational diabetes mellitus by inhibiting follistatin-like 3.

Published in:

Journal of Perinatal Medicine, 2025, v. 53, n. 5, p. 604, doi. 10.1515/jpm-2024-0509

By:

Jiang, Yan;
Zhao, Xuehan;
Fang, Ying;
Yang, Xiaokui

Publication type:

Article

The added value of metagenomic next-generation sequencing in central nervous system infections: a systematic review of case reports.

Published in:

Infection, 2025, v. 53, n. 3, p. 831, doi. 10.1007/s15010-025-02502-2

By:

Birkeland, Kira Waagner;
Mostert, Laurence;
Claas, Eric C.J.;
Aamot, Hege Vangstein;
Demuyser, Thomas

Publication type:

Article

Toxigenic Corynebacterium ulcerans in raw milk of a cow with acute mastitis: case report and historical review on milk-transmitted diphtheria.

Published in:

Infection, 2025, v. 53, n. 3, p. 767, doi. 10.1007/s15010-025-02477-0

By:

Sing, Andreas;
Luaces, Laura Macias;
Dangel, Alexandra;
Deramo, Stefano;
Bengs, Katja;
Melnikov, Vyacheslav G.;
Berger, Anja

Publication type:

Article

Periorbital primary cutaneous mucormycosis: a case report and literature review.

Published in:

Infection, 2025, v. 53, n. 3, p. 1233, doi. 10.1007/s15010-024-02464-x

By:

Xu, Yan;
Wang, Chunyou;
Zhang, Lian;
Zhai, Zhifang;
Wang, Huan

Publication type:

Article

Targeted next-generation sequencing - a promising approach in the diagnosis of Mycobacterium tuberculosis and drug resistance.

Published in:

Infection, 2025, v. 53, n. 3, p. 967, doi. 10.1007/s15010-024-02411-w

By:

Wu, Xiaocui;
Tan, Guangkun;
Sun, Chunlei;
Wang, Yang;
Yang, Jinghui;
Wu, Chunqiu;
Hu, Chaohui;
Yu, Fangyou

Publication type:

Article

Clinical, Immunologic, and Genetic Characteristics in Patients With Syndrome of Undifferentiated Recurrent Fevers.

Published in:

Arthritis & Rheumatology, 2025, v. 77, n. 5, p. 596, doi. 10.1002/art.43065

By:

Macaraeg, Marci;
Baker, Elizabeth;
Handorf, Elizabeth;
Matt, Michael;
Baker, Elizabeth K.;
Brunner, Hermine;
Grom, Alexei A.;
Henrickson, Michael;
Huggins, Jennifer;
Zhang, Wenying;
Lee, Pui;
Marsh, Rebecca;
Schulert, Grant S.

Publication type:

Article

Characterization of Genetic Landscape and Novel Inflammatory Biomarkers in Patients With Adult‐Onset Still's Disease.

Published in:

Arthritis & Rheumatology, 2025, v. 77, n. 5, p. 582, doi. 10.1002/art.43054

By:

Topping, Joanne;
Chang, Leon;
Nadat, Fatima;
Poulter, James A.;
Ibbotson, Alice;
Lara‐Reyna, Samuel;
Watson, Christopher M.;
Carter, Clive;
Pournara, Linda P.;
Zernicke, Jan;
Ross, Rebecca L.;
Cargo, Catherine;
Lyons, Paul A.;
Smith, Kenneth G. C.;
Del Galdo, Francesco;
Rech, Jürgen;
Fautrel, Bruno;
Feist, Eugen;
McDermott, Michael F.;
Savic, Sinisa

Publication type:

Article

Genetic analysis of ERBB4 gene in Chinese patients with amyotrophic lateral sclerosis: a single-center study and systematic review of published literature.

Published in:

Frontiers in Aging Neuroscience, 2025, p. 1, doi. 10.3389/fnagi.2025.1584541

By:

Shen, Dongchao;
Yang, Xunzhe;
He, Di;
Zhang, Kang;
Liu, Shuangwu;
Sun, Xiaohan;
Li, Jinyue;
Cai, Zhengyi;
Liu, Mingsheng;
Zhang, Xue;
Liu, Qing;
Cui, Liying

Publication type:

Article

Anaerobic biodegradation of PLA at mesophilic and thermophilic temperatures: methanation potential and associated microbial community.

Published in:

Environmental Technology, 2025, v. 46, n. 15, p. 2932, doi. 10.1080/09593330.2024.2449267

By:

Mu, Lan;
Ding, Jingxuan;
Wang, Yifan;
Peng, Hao;
Tao, Junyu;
Pulkkinen, Emma;
Si, Hang;
Zhang, Lei;
Li, Aimin;
Li, Jinhe

Publication type:

Article

Screening of Lactiplantibacillus plantarum with High Glycosidase Production and Its Effect on Terpenoids in Wine.

Published in:

Journal of Chinese Institute of Food Science & Technology / Zhongguo Shipin Xuebao, 2025, v. 25, n. 4, p. 232, doi. 10.16429/j.1009-7848.2025.04.021

By:

WANG Qingxia;
ZHOU Degang;
SHI Lin;
ZHU Xia;
YANG Xueshan

Publication type:

Article

Clinicopathological characteristics of progressive gastrointestinal stromal tumors and heterogeneity analyses of secondary mutations.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf110

By:

Li, Jiaxin;
Sun, Lin;
Liu, Shasha;
Liu, Huimin;
Li, Bin;
Zhan, Hongjie;
Sun, Yan

Publication type:

Article

The PancreasView gemcitabine transcriptomic signature predicts response to gemcitabine in patients with resected pancreatic ductal adenocarcinoma.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf083

By:

Bolm, Louisa;
Fraunhoffer, Nicolas;
Dusetti, Nelson;
Straesser, Julia;
Petruch, Natalie;
Castillo, Carlos Fernandez del;
Iovanna, Juan

Publication type:

Article

A rising tide lifts all boats in the personalized cancer care continuum for mNSCLC: bridging inequities in NGS fosters equity in targeted treatment.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf067

By:

Lin, Victor T G;
Ma, Esprit;
Jain, Neha;
Xia, Zhiyu;
Sheinson, Danny;
Yu, Elaine;
Daniel, Davey;
Huang, Richard S P;
Vidal, Gregory;
Martin, Richard Lewis;
Zuniga, Richard;
Stricker, Thomas

Publication type:

Article

Efficacy of 2 different fibroblast growth factor receptor-inhibitors in a patient with extrahepatic cholangiocarcinoma harboring an FGFR2 mutation: a case report.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyae294

By:

Galli-Vareia, Ilianna;
Szturz, Petr;
Voutsadakis, Ioannis A;
Villard, Nicolas;
Tsoumakidou, Georgia;
Fleury, Mapi;
Herrera, Gabriela;
Fasquelle, Francois;
Godat, Sebastien;
Digklia, Antonia

Publication type:

Article