Works matching DE "BACTERIAL RNA"

Results: 305

RNase E: at the interface of bacterial RNA processing and decay.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 1, p. 45, doi. 10.1038/nrmicro2930

By:

Mackie, George A.

Publication type:

Article

Bacterial RNA thermometers: molecular zippers and switches.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 4, p. 255, doi. 10.1038/nrmicro2730

By:

Kortmann, Jens;
Narberhaus, Franz

Publication type:

Article

Frontispiece: Aminoglycoside Conjugation for RNA Targeting: Antimicrobials and Beyond.

Published in:

Chemistry - A European Journal, 2020, v. 26, n. 54, p. 1, doi. 10.1002/chem.202085461

By:

Aradi, Klara;
Di Giorgio, Audrey;
Duca, Maria

Publication type:

Article

Aminoglycoside Conjugation for RNA Targeting: Antimicrobials and Beyond.

Published in:

Chemistry - A European Journal, 2020, v. 26, n. 54, p. 12273, doi. 10.1002/chem.202002258

By:

Aradi, Klara;
Di Giorgio, Audrey;
Duca, Maria

Publication type:

Article

Pond Sediment Magnetite Grains Show a Distinctive Microbial Community.

Published in:

Microbial Ecology, 2015, v. 70, n. 1, p. 168, doi. 10.1007/s00248-014-0562-7

By:

Song, H.-K.;
Sonkaria, S.;
Khare, V.;
Dong, K.;
Lee, H.-T.;
Ahn, S.-H.;
Kim, H.-K.;
Kang, H.-J.;
Lee, S.-H.;
Jung, S.;
Adams, J.

Publication type:

Article

Symbiotic bacteria associated to Prosthechea citrina, a Mexican endemic orchid.

Published in:

Revista Mexicana de Fitopatología, 2020, v. 38, n. 3, p. 398, doi. 10.18781/R.MEX.FIT.2004-2

By:

Santiago-Gerónimo, Tomasita;
Lozoya-Saldaña, Héctor;
Rodríguez-Mejía, María Lourdes

Publication type:

Article

RNA Degradation in Staphylococcus aureus: Diversity of Ribonucleases and Their Impact.

Published in:

International Journal of Genomics, 2015, v. 2015, p. 1, doi. 10.1155/2015/395753

By:

Bonnin, Rémy A.;
Bouloc, Philippe

Publication type:

Article

Bacterial RNA virus MS2 exposure increases the expression of cancer progression genes in the LNCaP prostate cancer cell line.

Published in:

Oncology Letters, 2023, v. 25, n. 2, p. N.PAG, doi. 10.3892/ol.2023.13672

By:

Sanmukh, Swapnil Ganesh;
Dos Santos, Nilton José;
Nascimento Barquilha, Caroline;
De Carvalho, Márcio;
Pintor Dos Reis, Patricia;
Delella, Flávia Karina;
Carvalho, Hernandes F.;
Latek, Dorota;
Fehér, Tamás;
Felisbino, Sérgio Luis

Publication type:

Article

Abundant antibiotic resistance genes in rhizobiome of the human edible Moringa oleifera medicinal plant.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.990169

By:

Shami, Ashwag Y.;
Abulfaraj, Aala A.;
Refai, Mohammed Y.;
Barqawi, Aminah A.;
Binothman, Najat;
Tashkandi, Manal A.;
Baeissa, Hanadi M.;
Baz, Lina;
Abuauf, Haneen W.;
Ashy, Ruba A.;
Jalal, Rewaa S.

Publication type:

Article

Editorial: Roles of Regulatory RNAs in Bacterial Pathogens.

Published in:

2022

By:

Hommais, Florence;
Soutourina, Olga

Publication type:

Editorial

The RNA Chaperone Protein Hfq Regulates the Characteristic Sporulation and Insecticidal Activity of Bacillus thuringiensis.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.884528

By:

Yu, Zhaoqing;
Fu, Yang;
Zhang, Wei;
Zhu, Li;
Yin, Wen;
Chou, Shan-Ho;
He, Jin

Publication type:

Article

Tree Species Diversity and Forest Edge Density Jointly Shape the Gut Microbiota Composition in Juvenile Great Tits (Parus major).

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.790189

By:

Goossens, Evy;
Boonyarittichaikij, Roschong;
Dekeukeleire, Daan;
Hertzog, Lionel;
Van Praet, Sarah;
Pasmans, Frank;
Bonte, Dries;
Verheyen, Kris;
Lens, Luc;
Martel, An;
Verbrugghe, Elin

Publication type:

Article

Corrigendum: Changes in the Carbon Metabolism of Escherichia coli During the Evolution of Doxycycline Resistance.

Published in:

2022

By:

Yang, Yiwen;
Mi, Jiandui;
Liang, Jiadi;
Liao, Xindi;
Ma, Baohua;
Zou, Yongde;
Wang, Yan;
Liang, Juanboo;
Wu, Yinbao

Publication type:

Correction Notice

Small RNA Profiling in Mycobacterium Provides Insights Into Stress Adaptability.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.752537

By:

Chen, Yingyu;
Zhai, Wenjun;
Zhang, Kailun;
Liu, Han;
Zhu, Tingting;
Su, Li;
Bermudez, Luiz;
Chen, Huanchun;
Guo, Aizhen

Publication type:

Article

Bacterial RNA Contributes to the Down-Modulation of MHC-II Expression on Monocytes/Macrophages Diminishing CD4+ T Cell Responses.

Published in:

Frontiers in Immunology, 2019, p. 1, doi. 10.3389/fimmu.2019.02181

By:

Milillo, M. Ayelén;
Trotta, Aldana;
Serafino, Agustina;
Marin Franco, José Luis;
Marinho, Fábio V.;
Alcain, Julieta;
Genoula, Melanie;
Balboa, Luciana;
Costa Oliveira, Sergio;
Giambartolomei, Guillermo H.;
Barrionuevo, Paula

Publication type:

Article

Crucial Role of Nucleic Acid Sensing via Endosomal Toll-Like Receptors for the Defense of Streptococcus pyogenes in vitro and in vivo.

Published in:

Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00198

By:

Hafner, Anna;
Kolbe, Ulrike;
Freund, Isabel;
Castiglia, Virginia;
Kovarik, Pavel;
Poth, Tanja;
Herster, Franziska;
Weigand, Markus A.;
Weber, Alexander N. R.;
Dalpke, Alexander H.;
Eigenbrod, Tatjana

Publication type:

Article

RNA chaperones: Potential candidates for engineering salt tolerance in rice.

Published in:

Crop Science, 2020, v. 60, n. 2, p. 530, doi. 10.1002/csc2.20134

By:

Ganie, Showkat Ahmad

Publication type:

Article

Sigma factor 1 in chloroplast gene transcription and photosynthetic light acclimation.

Published in:

Journal of Experimental Botany, 2020, v. 71, n. 3, p. 1029, doi. 10.1093/jxb/erz464

By:

Macadlo, Lauren A;
Ibrahim, Iskander M;
Puthiyaveetil, Sujith

Publication type:

Article

Detecting the Presence of Bacterial DNA and RNA by Polymerase Chain Reaction to Diagnose Suspected Periprosthetic Joint Infection after Antibiotic Therapy.

Published in:

Orthopaedic Surgery, 2018, v. 10, n. 1, p. 40, doi. 10.1111/os.12359

By:

Fang, Xin‐yu;
Li, Wen‐bo;
Zhang, Chao‐fan;
Huang, Zi‐da;
Zeng, Hui‐yi;
Dong, Zheng;
Zhang, Wen‐ming

Publication type:

Article

Structural analysis of neomycin B and kanamycin A binding Aminoglycosides Modifying Enzymes (AME) and bacterial ribosomal RNA.

Published in:

Molecular Informatics, 2024, v. 43, n. 7, p. 1, doi. 10.1002/minf.202300339

By:

Revillo Imbernon, Julia;
Weibel, Jean‐Marc;
Ennifar, Eric;
Prévost, Gilles;
Kellenberger, Esther

Publication type:

Article

Modulation of Bacterial sRNAs Activity by Epigenetic Modifications: Inputs from the Eukaryotic miRNAs.

Published in:

Genes, 2019, v. 10, n. 1, p. 22, doi. 10.3390/genes10010022

By:

Felden, Brice;
Gilot, David

Publication type:

Article

Bacterial RNA synthesis: back to the limelight.

Published in:

2021

By:

Artsimovitch, Irina

Publication type:

Editorial

Rho-dependent transcription termination: a revisionist view.

Published in:

Transcription (2154-1264), 2021, v. 12, n. 4, p. 171, doi. 10.1080/21541264.2021.1991773

By:

Hao, Zhitai;
Svetlov, Vladimir;
Nudler, Evgeny

Publication type:

Article

Laser capture microdissection to study Bacillus cereus iron homeostasis gene expression during Galleria mellonella in vivo gut colonization.

Published in:

Virulence, 2021, v. 12, n. 1, p. 2104, doi. 10.1080/21505594.2021.1959790

By:

Consentino, Laurent;
Rejasse, Agnès;
Crapart, Nicolas;
Bevilacqua, Claudia;
Nielsen-LeRoux, Christina

Publication type:

Article

Laser capture microdissection to study Bacillus cereus iron homeostasis gene expression during Galleria mellonella in vivo gut colonization.

Published in:

Virulence, 2021, v. 12, n. 1, p. 2104, doi. 10.1080/21505594.2021.1959790

By:

Consentino, Laurent;
Rejasse, Agnès;
Crapart, Nicolas;
Bevilacqua, Claudia;
Nielsen-LeRoux, Christina

Publication type:

Article

A transcriptomic insight into the human sperm microbiome through next-generation sequencing.

Published in:

Systems Biology in Reproductive Medicine, 2023, v. 69, n. 3, p. 188, doi. 10.1080/19396368.2023.2183912

By:

Corral-Vazquez, Celia;
Blanco, Joan;
Aiese Cigliano, Riccardo;
Zaida, Sarrate;
Vidal, Francesca;
Anton, Ester

Publication type:

Article

Studies on Trueperella pyogenes isolated from an okapi (Okapia johnstoni) and a royal python (Python regius).

Published in:

BMC Veterinary Research, 2020, v. 16, p. 1, doi. 10.1186/s12917-020-02508-y

By:

Ahmed, Marwa F. E.;
Alssahen, Mazen;
Lämmler, Christoph;
Eisenberg, Tobias;
Plötz, Madeleine;
Abdulmawjood, Amir

Publication type:

Article

Effect of rotor type on the separation of isotope-labeled and unlabeled Escherichia coli RNA by isopycnic density ultracentrifugation.

Published in:

Canadian Journal of Microbiology, 2017, v. 63, n. 1, p. 83, doi. 10.1139/cjm-2016-0483

By:

Herrmann, Elena;
Koch, Patrick;
Riedel, Christian U.;
Young, Wayne;
Egert, Markus

Publication type:

Article

Seasonal and spatial variations in microbial activity at various phylogenetic resolutions at a groundwater - surface water interface.

Published in:

Canadian Journal of Microbiology, 2014, v. 60, n. 5, p. 277, doi. 10.1139/cjm-2014-0048

By:

Yu, Ran;
Smets, Barth F.;
Gan, Ping;
MacKay, Allison A.;
Graf, Joerg

Publication type:

Article

Detection of small RNAs in Bordetella pertussis and identification of a novel repeated genetic element.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-207

By:

Hot, David;
Slupek, Stéphanie;
Wulbrecht, Bérénice;
D'Hondt, Anthony;
Hubans, Christine;
Antoine, Rudy;
Locht, Camille;
Lemoine, Yves

Publication type:

Article

Alternative Roles for CRISPR/Cas Systems in Bacterial Pathogenesis.

Published in:

PLoS Pathogens, 2013, v. 9, n. 10, p. 1, doi. 10.1371/journal.ppat.1003621

By:

Sampson, Timothy R.;
Weiss, David S.

Publication type:

Article

Binding free energy decomposition and multiple unbinding paths of buried ligands in a PreQ1 riboswitch.

Published in:

PLoS Computational Biology, 2021, v. 17, n. 11, p. 1, doi. 10.1371/journal.pcbi.1009603

By:

Hu, Guodong;
Zhou, Huan-Xiang

Publication type:

Article

TwinCons: Conservation score for uncovering deep sequence similarity and divergence.

Published in:

PLoS Computational Biology, 2021, v. 17, n. 10, p. 1, doi. 10.1371/journal.pcbi.1009541

By:

Penev, Petar I.;
Alvarez-Carreño, Claudia;
Smith, Eric;
Petrov, Anton S.;
Williams, Loren Dean

Publication type:

Article

Effect of 8-Oxo-1,N6-Ethenoadenine Derivatives on the Activity of RNA Polymerases from SARS-CoV-2 and Escherichia coli.

Published in:

Biochemistry (00062979), 2024, v. 89, n. 12/13, p. 2263, doi. 10.1134/S0006297924120149

By:

Petushkov, Ivan V.;
Aralov, Andrey V.;
Ivanov, Igor A.;
Baranov, Mikhail S.;
Zatsepin, Timofey S.;
Kulbachinskiy, Andrey V.

Publication type:

Article

Co-expression of Cas9 and single-guided RNAs in Escherichia coli streamlines production of Cas9 ribonucleoproteins.

Published in:

Communications Biology, 2019, v. 2, n. 1, p. N.PAG, doi. 10.1038/s42003-019-0402-x

By:

Qiao, Jie;
Li, Wenqiang;
Lin, Siyu;
Sun, Wenli;
Ma, Lixin;
Liu, Yi

Publication type:

Article

Advances in engineered trans-acting regulatory RNAs and their application in bacterial genome engineering.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 6, p. 819, doi. 10.1007/s10295-019-02160-y

By:

Ahmed, Waqas;
Hafeez, Mian Abdul;
Ahmed, Rais

Publication type:

Article

Discovery, properties, and biosynthesis of pseudouridimycin, an antibacterial nucleoside-analog inhibitor of bacterial RNA polymerase.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 3/4, p. 335, doi. 10.1007/s10295-018-2109-2

By:

Maffioli, Sonia I.;
Sosio, Margherita;
Ebright, Richard H.;
Donadio, Stefano

Publication type:

Article

An Optimized Workflow for the Discovery of New Antimicrobial Compounds Targeting Bacterial RNA Polymerase Complex Formation.

Published in:

Antibiotics (2079-6382), 2022, v. 11, n. 10, p. N.PAG, doi. 10.3390/antibiotics11101449

By:

Caputo, Alessia;
Sartini, Sara;
Levati, Elisabetta;
Minato, Ilaria;
Elisi, Gian Marco;
Di Stasi, Adriana;
Guillou, Catherine;
Goekjian, Peter G.;
Garcia, Pierre;
Gueyrard, David;
Bach, Stéphane;
Comte, Arnaud;
Ottonello, Simone;
Rivara, Silvia;
Montanini, Barbara

Publication type:

Article

A Riboswitch-Driven Era of New Antibacterials.

Published in:

Antibiotics (2079-6382), 2022, v. 11, n. 9, p. 1243, doi. 10.3390/antibiotics11091243

By:

Giarimoglou, Nikoleta;
Kouvela, Adamantia;
Maniatis, Alexandros;
Papakyriakou, Athanasios;
Zhang, Jinwei;
Stamatopoulou, Vassiliki;
Stathopoulos, Constantinos

Publication type:

Article

Staphylococcus aureus RnpA Inhibitors: Computational-Guided Design, Synthesis and Initial Biological Evaluation.

Published in:

Antibiotics (2079-6382), 2021, v. 10, n. 4, p. 438, doi. 10.3390/antibiotics10040438

By:

Suigo, Lorenzo;
Chojnacki, Michaelle;
Zanotto, Carlo;
Sebastián-Pérez, Victor;
Morghen, Carlo De Giuli;
Casiraghi, Andrea;
Dunman, Paul M.;
Valoti, Ermanno;
Straniero, Valentina

Publication type:

Article

Novel Aspects of Polynucleotide Phosphorylase Function in Streptomyces.

Published in:

Antibiotics (2079-6382), 2018, v. 7, n. 1, p. 25, doi. 10.3390/antibiotics7010025

By:

Jones, George H.

Publication type:

Article

ارزیابی بیان ژنهای اکسیدکنندۀ آهن و گوگرد در باکتری سولفوباسیلوس ترموسولفیدواکسیدانس تحتتأثیر شاخصهای مؤثر در فرایند آبشویۀ میکروبی.

Published in:

Biological Journal of Microorganism, 2020, v. 9, n. 35, p. 17, doi. 10.22108/BJM.2020.120297.1246

By:

کووووورر حورمحا&;
فووورخ رخبخوووم;
احاوووود م ووووو;
محاووود هاشووو آ

Publication type:

Article

RNase III-mediated processing of a trans-acting bacterial sRNA and its cisencoded antagonist.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.69064

By:

Svensson, Sarah Lauren;
Sharma, Cynthia Mira

Publication type:

Article

Engineering RNA polymerase to construct biotechnological host strains of cyanobacteria.

Published in:

Physiologia Plantarum, 2024, v. 176, n. 2, p. 1, doi. 10.1111/ppl.14263

By:

Turunen, Otso;
Saleem, Tayyab;
Kurkela, Juha;
Kallio, Pauli;
Tyystjärvi, Taina

Publication type:

Article

Examining potential confounding factors in gene expression analysis of human saliva and identifying potential housekeeping genes.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-05670-5

By:

Ostheim, P.;
Alemu, S. W.;
Tichý, A.;
Sirak, I.;
Davidkova, M.;
Stastna, M. Markova;
Kultova, G.;
Schuele, S.;
Paunesku, T.;
Woloschak, G.;
Ghandhi, S. A.;
Amundson, S. A.;
Haimerl, M.;
Stroszczynski, C.;
Port, M.;
Abend, M.

Publication type:

Article

Host long noncoding RNAs in bacterial infections.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1419782

By:

Yong Cheng;
Yurong Liang;
Xuejuan Tan;
Lin Liu

Publication type:

Article

Corrigendum: Inflammatory response against Staphylococcus aureus via intracellular sensing of nucleic acids in keratinocytes.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1330357

By:

Quang Vinh Ngo;
Faass, Larissa;
Sähr, Aline;
Hildebrand, Dagmar;
Eigenbrod, Tatjana;
Heeg, Klaus;
Nurjadi, Dennis

Publication type:

Article

Bacterial small RNAs may mediate immune response differences seen in respiratory syncytial virus versus rhinovirus bronchiolitis.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1330991

By:

Krohmaly, Kylie I.;
Perez-Losada, Marcos;
Ramos-Tapia, Ignacio;
Zhaozhong Zhu;
Kohei Hasegawa;
Camargo Jr., Carlos A.;
Harmon, Brennan;
Espinola, Janice A.;
Cechinel, Laura Reck;
Batabyal, Rachael;
Freishtat, Robert J.;
Hahn, Andrea

Publication type:

Article

Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32079-5

By:

Lisitskaya, Lidiya;
Shin, Yeonoh;
Agapov, Aleksei;
Olina, Anna;
Kropocheva, Ekaterina;
Ryazansky, Sergei;
Aravin, Alexei A.;
Esyunina, Daria;
Murakami, Katsuhiko S.;
Kulbachinskiy, Andrey

Publication type:

Article

Author Correction: Programmable RNA targeting by bacterial Argonaute nucleases with unconventional guide binding and cleavage specificity.

Published in:

2022

By:

Lisitskaya, Lidiya;
Shin, Yeonoh;
Agapov, Aleksei;
Olina, Anna;
Kropocheva, Ekaterina;
Ryazansky, Sergei;
Aravin, Alexei A.;
Esyunina, Daria;
Murakami, Katsuhiko S.;
Kulbachinskiy, Andrey

Publication type:

Correction Notice