Works matching DE "REGULONS"

Results: 92

Specificity of the Metalloregulator CueR for Monovalent Metal Ions: Possible Functional Role of a Coordinated Thiol?

Published in:

Angewandte Chemie, 2015, v. 127, n. 52, p. 15982, doi. 10.1002/ange.201508555

By:

Szunyogh, Dániel;
Szokolai, Hajnalka;
Thulstrup, Peter W.;
Larsen, Flemming H.;
Gyurcsik, Béla;
Christensen, Niels Johan;
Stachura, Monika;
Hemmingsen, Lars;
Jancsó, Attila

Publication type:

Article

Involvement of AtoSC two-component system in Escherichia coli flagellar regulon.

Published in:

Amino Acids, 2012, v. 43, n. 2, p. 833, doi. 10.1007/s00726-011-1140-7

By:

Theodorou, Marina;
Theodorou, Evaggelos;
Kyriakidis, Dimitrios

Publication type:

Article

DMINDA 2.0: integrated and systematic views of regulatory DNA motif identification and analyses.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2586, doi. 10.1093/bioinformatics/btx223

By:

Jinyu Yang;
Xin Chen;
McDermaid, Adam;
Qin Ma

Publication type:

Article

MicroRNA regulons in tumor microenvironment.

Published in:

Oncogene, 2015, v. 34, n. 24, p. 3085, doi. 10.1038/onc.2014.254

By:

Suzuki, H I;
Katsura, A;
Matsuyama, H;
Miyazono, K

Publication type:

Article

A Ferroxidase, Cfo1, Regulates Diverse Environmental Stress Responses of Cryptococcus neoformans through the HOG Pathway.

Published in:

Mycobiology, 2014, v. 42, n. 2, p. 152, doi. 10.5941/MYCO.2014.42.2.152

By:

Kyung-Tae Lee;
Jang-Won Lee;
Dohyun Lee;
Won-Hee Jung;
Yong-Sun Bahn

Publication type:

Article

RECTA: Regulon Identification Based on Comparative Genomics and Transcriptomics Analysis.

Published in:

Genes, 2018, v. 9, n. 6, p. 278, doi. 10.3390/genes9060278

By:

Chen, Xin;
Ma, Anjun;
McDermaid, Adam;
Ma, Qin;
Zhang, Hanyuan;
Liu, Chao;
Cao, Huansheng

Publication type:

Article

Evidence of cyclical light/dark-regulated expression of freezing tolerance in young winter wheat plants.

Published in:

PLoS ONE, 2018, v. 13, n. 6, p. 1, doi. 10.1371/journal.pone.0198042

By:

Skinner, Daniel Z.;
Bellinger, Brian;
Hiscox, William;
Helms, Gregory L.

Publication type:

Article

The effect of 20-hydroxyecdysone on the susceptibility of Escherichia coli to different antibiotics.

Published in:

Journal of Applied Microbiology, 2016, v. 121, n. 6, p. 1511, doi. 10.1111/jam.13304

By:

Smirnova, G.;
Bezmaternykh, K.;
Oktyabrsky, O.N.

Publication type:

Article

Transcriptome signatures of class I and III stress response deregulation in Lactobacillus plantarum reveal pleiotropic adaptation.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-112

By:

de Veen, Hermien Van Bokhorst-van;
Bongers, Roger S.;
Wels, Michiel;
Bron, Peter A.;
Kleerebezem, Michiel

Publication type:

Article

The Clostridium small RNome that responds to stress: the paradigm and importance of toxic metabolite stress in C. acetobutylicum.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-849

By:

Venkataramanan, Keerthi P.;
Jones, Shawn W.;
McCormick, Kevin P.;
Kunjeti, Sridhara G.;
Ralston, Matthew T.;
Meyers, Blake C.;
Papoutsakis, Eleftherios T.

Publication type:

Article

The MetJ regulon in gammaproteobacteria determined by comparative genomics methods.

Published in:: BMC Genomics, 2011, v. 12, n. Suppl 2, p. 558, doi. 10.1186/1471-2164-12-558
Publication type:: Article

Elucidation of the RamA Regulon in Klebsiella pneumoniae Reveals a Role in LPS Regulation.

Published in:

PLoS Pathogens, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.ppat.1004627

By:

De Majumdar, Shyamasree;
Yu, Jing;
Fookes, Maria;
McAteer, Sean P.;
Llobet, Enrique;
Finn, Sarah;
Spence, Shaun;
Monaghan, Avril;
Kissenpfennig, Adrien;
Ingram, Rebecca J.;
Bengoechea, José;
Gally, David L.;
Fanning, Séamus;
Elborn, Joseph S.;
Schneiders, Thamarai

Publication type:

Article

The Transcriptional Activator LdtR from ‘Candidatus Liberibacter asiaticus’ Mediates Osmotic Stress Tolerance.

Published in:

PLoS Pathogens, 2014, v. 10, n. 4, p. 1, doi. 10.1371/journal.ppat.1004101

By:

Pagliai, Fernando A.;
Gardner, Christopher L.;
Bojilova, Lora;
Sarnegrim, Amanda;
Tamayo, Cheila;
Potts, Anastasia H.;
Teplitski, Max;
Folimonova, Svetlana Y.;
Gonzalez, Claudio F.;
Lorca, Graciela L.

Publication type:

Article

Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion Virulence Regulon across the Pseudomonas syringae Phylogeny.

Published in:

PLoS Pathogens, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.ppat.1003807

By:

Mucyn, Tatiana S.;
Yourstone, Scott;
Lind, Abigail L.;
Biswas, Surojit;
Nishimura, Marc T.;
Baltrus, David A.;
Cumbie, Jason S.;
Chang, Jeff H.;
Jones, Corbin D.;
Dangl, Jeffery L.;
Grant, Sarah R.

Publication type:

Article

Cytoskeleton-Dependent Transport as a Potential Target for Interfering with Post-transcriptional HuR mRNA Regulons.

Published in:

Frontiers in Pharmacology, 2016, p. 1, doi. 10.3389/fphar.2016.00251

By:

Eberhardt, Wolfgang;
Badawi, Amel;
Biyanee, Abhiruchi;
Pfeilschifter, Josef

Publication type:

Article

In planta fitness-cost of the Atu4232-regulon encoding for a selective GABA-binding sensor in Agrobacterium.

Published in:

Communicative & Integrative Biology, 2013, v. 6, n. 3, p. e23692-1, doi. 10.4161/cib.23692

By:

Planamente, Sara;
Moréra, Solange;
Faure, Denis

Publication type:

Article

Correction: Characterization of the RelBbu Regulon in Borrelia burgdorferi Reveals Modulation of Glycerol Metabolism by (p)ppGpp.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0123614

By:

null, null

Publication type:

Article

Characterization of the RelBbu Regulon in Borrelia burgdorferi Reveals Modulation of Glycerol Metabolism by (p)ppGpp.

Published in:

PLoS ONE, 2015, v. 10, n. 2, p. 1, doi. 10.1371/journal.pone.0118063

By:

Bugrysheva, Julia V.;
Pappas, Christopher J.;
Terekhova, Darya A.;
Iyer, Radha;
Godfrey, Henry P.;
Schwartz, Ira;
Cabello, Felipe C.

Publication type:

Article

Characterization of the YdeO Regulon in Escherichia coli.

Published in:

PLoS ONE, 2014, v. 9, n. 11, p. 1, doi. 10.1371/journal.pone.0111962

By:

Yamanaka, Yuki;
Oshima, Taku;
Ishihama, Akira;
Yamamoto, Kaneyoshi

Publication type:

Article

RNA-Seq Analysis Reveals a Six-Gene SoxR Regulon in Streptomyces coelicolor.

Published in:

PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0106181

By:

Naseer, Nawar;
Shapiro, Joshua A.;
Chander, Monica

Publication type:

Article

Global Analysis of the HrpL Regulon in the Plant Pathogen Pseudomonas syringae pv. tomato DC3000 Reveals New Regulon Members with Diverse Functions.

Published in:

PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0106115

By:

Lam, Hanh N.;
Chakravarthy, Suma;
Wei, Hai-Lei;
BuiNguyen, HoangChuong;
Stodghill, Paul V.;
Collmer, Alan;
Swingle, Bryan M.;
Cartinhour, Samuel W.

Publication type:

Article

Control of Competence for DNA Transformation in Streptococcus suis by Genetically Transferable Pherotypes.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099394

By:

Zaccaria, Edoardo;
van Baarlen, Peter;
de Greeff, Astrid;
Morrison, Donald A.;
Smith, Hilde;
Wells, Jerry M.

Publication type:

Article

Deciphering the Cis-Regulatory Elements for XYR1 and CRE1 Regulators in Trichoderma reesei.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099366

By:

Silva-Rocha, Rafael;
Castro, Lilian dos Santos;
Antoniêto, Amanda Cristina Campos;
Guazzaroni, María-Eugenia;
Persinoti, Gabriela Felix;
Silva, Roberto Nascimento

Publication type:

Article

Microarray Analysis of the Ler Regulon in Enteropathogenic and Enterohaemorrhagic Escherichia coli Strains.

Published in:

PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0080160

By:

Bingle, Lewis E. H.;
Constantinidou, Chrystala;
Shaw, Robert K.;
Islam, Md. Shahidul;
Patel, Mala;
Snyder, Lori A. S.;
Lee, David J.;
Penn, Charles W.;
Busby, Stephen J. W.;
Pallen, Mark J.

Publication type:

Article

The Putative Thiosulfate Sulfurtransferases PspE and GlpE Contribute to Virulence of Salmonella Typhimurium in the Mouse Model of Systemic Disease.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0070829

By:

Wallrodt, Inke;
Jelsbak, Lotte;
Thorndahl, Lotte;
Thomsen, Line E.;
Lemire, Sebastien;
Olsen, John E.

Publication type:

Article

Genome-Wide Analysis of the Salmonella Fis Regulon and Its Regulatory Mechanism on Pathogenicity Islands

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0064688

By:

Wang, Hui;
Liu, Bin;
Wang, Quan;
Wang, Lei

Publication type:

Article

Ergodic Sets as Cell Phenotype of Budding Yeast Cell Cycle.

Published in:

PLoS ONE, 2012, v. 7, n. 10, p. 1, doi. 10.1371/journal.pone.0045780

By:

Todd, Robert G.;
Helikar, Tomáš

Publication type:

Article

Listeria monocytogenes Differential Transcriptome Analysis Reveals Temperature-Dependent Agr Regulation and Suggests Overlaps with Other Regulons.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0043154

By:

Garmyn, Dominique;
Augagneur, Yoann;
Gal, Laurent;
Vivant, Anne-Laure;
Piveteau, Pascal;
Lenz, Laurel L.

Publication type:

Article

Identification of DNA Binding Motifs of the Mycobacterium tuberculosis PhoP/PhoR Two- Component Signal Transduction System.

Published in:

PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0042876

By:

Cimino, Mena;
Thomas, Christophe;
Namouchi, Amine;
Dubrac, Sarah;
Gicquel, Brigitte;
Gopaul, Deshmukh N.;
Karakousis, Petros C.

Publication type:

Article

Genome-Wide Transcriptional Profiles during Temperature and Oxidative Stress Reveal Coordinated Expression Patterns and Overlapping Regulons in Rice.

Published in:

PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0040899

By:

Mittal, Dheeraj;
Madhyastha, Dinesh A.;
Grover, Anil

Publication type:

Article

Appropriate DevR (DosR)-Mediated Signaling Determines Transcriptional Response, Hypoxic Viability and Virulence of Mycobacterium tuberculosis.

Published in:

PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0035847

By:

De Majumdar, Shyamasree;
Vashist, Atul;
Dhingra, Sakshi;
Gupta, Rajesh;
Singh, Alka;
Challu, Vijay K.;
Ramanathan, V. D.;
Kumar, Prahlad;
Tyagi, Jaya Sivaswami

Publication type:

Article

Genomic Arrangement of Regulons in Bacterial Genomes.

Published in:

PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0029496

By:

Han Zhang;
Yanbin Yin;
Victor Olman;
Ying Xu

Publication type:

Article

Investigation of the Staphylococcus aureus GraSR Regulon Reveals Novel Links to Virulence, Stress Response and Cell Wall Signal Transduction Pathways.

Published in:

PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0021323

By:

Falord, Mélanie;
Mäder, Ulrike;
Hiron, Aurélia;
Débarbouille, Michel;
Msadek, Tarek

Publication type:

Article

Immune Responses to the Enduring Hypoxic Response Antigen Rv0188 Are Preferentially Detected in Mycobacterium bovis Infected Cattle with Low Pathology.

Published in:

PLoS ONE, 2011, v. 6, n. 6, p. 1, doi. 10.1371/journal.pone.0021371

By:

Jones, Gareth J.;
Pirson, Chris;
Gideon, Hannah P.;
Wilkinson, Katalin A.;
Sherman, David R.;
Wilkinson, Robert J.;
Hewinson, R. Glyn;
Vordermeier, H. Martin

Publication type:

Article

Role of AcsR in expression of the acetyl-CoA synthetase gene in Vibrio vulnificus.

Published in:

BMC Microbiology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12866-015-0418-4

By:

Min Jung Kim;
Juri Kim;
Hye-Yeon Lee;
Hyeon Jin Noh;
Kyu-Ho Lee;
Soon-Jung Park

Publication type:

Article

Identified members of the Streptomyces lividans AdpA regulon involved in differentiation and secondary metabolism.

Published in:

BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-81

By:

Guyet, Aurélie;
Benaroudj, Nadia;
Proux, Caroline;
Gominet, Myriam;
Coppée, Jean-Yves;
Mazodier, Philippe

Publication type:

Article

A system-level model for the microbial regulatory genome.

Published in:

Molecular Systems Biology, 2014, v. 10, n. 7, p. n/a, doi. 10.15252/msb.20145160

By:

Brooks, Aaron N;
Reiss, David J;
Allard, Antoine;
Wu, Wei‐Ju;
Salvanha, Diego M;
Plaisier, Christopher L;
Chandrasekaran, Sriram;
Pan, Min;
Kaur, Amardeep;
Baliga, Nitin S

Publication type:

Article

The Regulation of the AdcR Regulon in Streptococcus pneumoniae Depends Both on Zn2+- and Ni2+-Availability.

Published in:

Frontiers in Cellular & Infection Microbiology, 2015, p. 1, doi. 10.3389/fcimb.2015.00091

By:

Manzoor, Irfan;
Shafeeq, Sulman;
Afzal, Muhammad;
Kuipers, Oscar P.

Publication type:

Article

PTS phosphorylation of Mga modulates regulon expression and virulence in the group A streptococcus.

Published in:: Molecular Microbiology, 2014, v. 93, n. 4, p. 834, doi. 10.1111/mmi.12722
Publication type:: Article

A chemical potentiator of copper-accumulation used to investigate the iron-regulons of S accharomyces cerevisiae.

Published in:

Molecular Microbiology, 2014, v. 93, n. 2, p. 317, doi. 10.1111/mmi.12661

By:

Foster, Andrew W.;
Dainty, Samantha J.;
Patterson, Carl J.;
Pohl, Ehmke;
Blackburn, Hannah;
Wilson, Clare;
Hess, Corinna R.;
Rutherford, Julian C.;
Quaranta, Laura;
Corran, Andy;
Robinson, Nigel J.

Publication type:

Article

Regulation of the KstR2 regulon of Mycobacterium tuberculosis by a cholesterol catabolite.

Published in:

Molecular Microbiology, 2013, v. 89, n. 6, p. 1201, doi. 10.1111/mmi.12340

By:

Casabon, Israël;
Zhu, Song‐Hua;
Otani, Hiroshi;
Liu, Jie;
Mohn, William W.;
Eltis, Lindsay D.

Publication type:

Article

PTS phosphorylation of Mga modulates regulon expression and virulence in the group A streptococcus.

Published in:

Molecular Microbiology, 2013, v. 88, n. 6, p. 1176, doi. 10.1111/mmi.12250

By:

Hondorp, Elise R.;
Hou, Sherry C.;
Hause, Lara L.;
Gera, Kanika;
Lee, Ching‐En;
McIver, Kevin S.

Publication type:

Article

The phosphotransferase protein EIIANtr modulates the phosphate starvation response through interaction with histidine kinase PhoR in Escherichia coli.

Published in:

Molecular Microbiology, 2012, v. 86, n. 1, p. 96, doi. 10.1111/j.1365-2958.2012.08176.x

By:

Lüttmann, Denise;
Göpel, Yvonne;
Görke, Boris

Publication type:

Article

The coming of age of the LeuO regulator.

Published in:

Molecular Microbiology, 2012, v. 85, n. 6, p. 1026, doi. 10.1111/j.1365-2958.2012.08175.x

By:

Hernández-Lucas, Ismael;
Calva, Edmundo

Publication type:

Article

Reconstruction of novel transcription factor regulons through inference of their binding sites.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0685-y

By:

Elmas, Abdulkadir;
Xiaodong Wang;
Samoilov, Michael S.

Publication type:

Article

Comparative transcriptome analysis of pepper ( Capsicum annuum) revealed common regulons in multiple stress conditions and hormone treatments.

Published in:

Plant Cell Reports, 2013, v. 32, n. 9, p. 1351, doi. 10.1007/s00299-013-1447-9

By:

Lee, Sanghyeob;
Choi, Doil

Publication type:

Article

Humoral Responses to Rv1733c, Rv0081, Rv1735c, and Rv1737c DosR Regulon-Encoded Proteins of in Individuals with Latent Tuberculosis Infection.

Published in:

2017

By:

Kimuda, Simon G.;
Nalwoga, Angela;
Levin, Jonathan;
Franken, Kees L. M. C.;
Ottenhoff, Tom H. M.;
Elliott, Alison M.;
Cose, Stephen;
Andia-Biraro, Irene

Publication type:

journal article

The SOS and RpoS Regulons Contribute to Bacterial Cell Robustness to Genotoxic Stress by Synergistically Regulating DNA Polymerase Pol II.

Published in:

Genetics, 2017, v. 206, n. 3, p. 1349, doi. 10.1534/genetics.116.199471

By:

Dapa, Tanja;
Fleurier, Sébastien;
Bredeche, Marie-Florence;
Matic, Ivan

Publication type:

Article

Streptococcus mutans copes with heat stress by multiple transcriptional regulons modulating virulence and energy metabolism.

Published in:

Scientific Reports, 2015, p. 12929, doi. 10.1038/srep12929

By:

Liu, Chengcheng;
Niu, Yulong;
Zhou, Xuedong;
Zheng, Xin;
Wang, Shida;
Guo, Qiang;
Li, Yuqing;
Li, Mingyun;
Li, Jiyao;
Yang, Yi;
Ding, Yi;
Lamont, Richard J.;
Xu, Xin

Publication type:

Article

Correction: Quantitative Proteomic Analysis of the Hfq-Regulon in Sinorhizobium meliloti 2011.

Published in:

2017

By:

Sobrero, Patricio;
Schlüter, Jan-Philip;
Lanner, Ulrike;
Schlosser, Andreas;
Becker, Anke;
Valverde, Claudio

Publication type:

Correction Notice