Works matching DE "GENE expression profiling"

Results: 5000

Exploring the role of neutrophils in inflammatory pain hypersensitivity via single-cell transcriptome profiling.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1552993

By:

Ding, Kai;
Liu, Xing;
Zeng, Bin;
Liu, Songyu;
Zhang, Lu;
Li, Bo;
Zhou, Jinyi;
Su, Xiaosan;
Wang, Jun

Publication type:

Article

NF2 loss-of-function and hypoxia drive radiation resistance in grade 2 meningiomas Open Access.

Published in:

JNCI: Journal of the National Cancer Institute, 2025, v. 117, n. 6, p. 1175, doi. 10.1093/jnci/djaf022

By:

Patel, Bhuvic;
Pugazenthi, Sangami;
English, Collin W;
Nitturi, Vijay;
Pari, Shree S;
Mahlokozera, Tatenda;
Leidig, William A;
Lu, Hsiang-Chih;
Yang, Alicia;
Roberts, Kaleigh;
DeSouza, Patrick;
McGeehan, Kyle P;
Mao, Diane D;
Sinha, Namita;
Ippolito, Joseph E;
Dahiya, Sonika;
Petti, Allegra;
Yano, Hiroko;
Klisch, Tiemo J;
Harmanci, Akdes S

Publication type:

Article

Tissue degrading and remodelling molecules in giant cell arteritis Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3095, doi. 10.1093/rheumatology/keae710

By:

Watanabe, Nobumasa;
Hara, Yuichiro;
Nishito, Yasumasa;
Kounoe, Mai;
Sekiyama, Kazunari;
Takamasu, Eisuke;
Kise, Takayasu;
Chinen, Naofumi;
Shimada, Kota;
Sugihara, Makoto;
Kawaji, Hideya

Publication type:

Article

Synovial transcriptome-wide association study implicates novel genes underlying rheumatoid arthritis risk.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 2515, doi. 10.1093/rheumatology/keae654

By:

Hu, Shou-Ye;
Jiang, Feng;
Song, Hui-Miao;
Wang, Ya-Kang;
Tian, Wen;
Wu, Hao;
Yao, Shi;
He, Chang-Yi;
Gao, Hui-Wu;
Yang, Tie-Lin;
Yang, Zhi;
Guo, Yan

Publication type:

Article

Type I interferon biomarker in idiopathic inflammatory myopathies: associations of Siglec-1 with disease activity and treatment response Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 2979, doi. 10.1093/rheumatology/keae630

By:

Kamperman, Renske G;
Veldkamp, Saskia R;
Evers, Sanne W;
Lim, Johan;
Schaik, Ivo van;
Royen-Kerkhof, Annet van;
Wijk, Femke van;
Kooi, Anneke J van der;
Jansen, Marc;
Raaphorst, Joost

Publication type:

Article

RNA sequencing uncovers key players of cartilage calcification: potential implications for osteoarthritis pathogenesis Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3151, doi. 10.1093/rheumatology/keae587

By:

Bernabei, Ilaria;
Faure, Elodie;
Wegrzyn, Julien;
Bertheaume, Nicolas;
Falgayrac, Guillaume;
Hugle, Thomas;
Nasi, Sonia;
Busso, Nathalie

Publication type:

Article

The role and mechanism of CRISPLD2 in skin fibrosis of systemic sclerosis.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3134, doi. 10.1093/rheumatology/keae541

By:

Ding, Liqing;
Bao, Ding;
Dai, Bingying;
Meng, Qiming;
Lv, Chunliu;
Luo, Hui;
Zhu, Honglin

Publication type:

Article

Exploring genetic and immune cell dynamics in systemic lupus erythematosus patients with Epstein–Barr virus infection via machine learning.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 2656, doi. 10.1093/rheumatology/keae537

By:

Gui, Jiajun;
Fang, Mengyuan;
Tu, Jianxin;
Chen, Xiaowei;
Sun, Li

Publication type:

Article

Identification of a novel anoikis-related gene signature to predict prognosis and tumor microenvironment in intrahepatic cholangiocarcinoma carcinoma.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02840-5

By:

Zhou, Xuan;
Wei, Bai;
Wang, Yan;
Liu, Mingjie;
Guo, Xiangru;
Duan, Yuting

Publication type:

Article

Predicting atezolizumab response in metastatic urothelial carcinoma patients using machine learning on integrated tumour gene expression and clinical data.

Published in:

NPJ Precision Oncology, 2025, v. 9, n. 1, p. 1, doi. 10.1038/s41698-025-00969-8

By:

Piyawajanusorn, Chayanit;
Ghislat, Ghita;
Ballester, Pedro J.

Publication type:

Article

Role of the SPI1/CDKN2A/p53 signaling pathway in cuproptosis of lung adenocarcinoma cells.

Published in:

Oncology Letters, 2025, v. 30, n. 1, p. N.PAG, doi. 10.3892/ol.2025.15099

By:

An, Jiayue;
Song, Wei;
Wang, Qin;
Tan, Boyu;
Fei, Xuan;
Wang, Ruoxi;
Li, Siyan;
Lu, Xiyu;
Li, Youjie;
Xie, Ning

Publication type:

Article

Modified pea apyrase has altered nuclear functions and enhances the growth of yeast and Arabidopsis.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1584871

By:

Tripathy, Manas K.;
Wang, Huan;
Slocum, Robert D.;
Jiang, Han-Wei;
Nam, Ji-Chul;
Sabharwal, Tanya;
Veerappa, Roopadarshini;
Brown, Katherine A.;
Cai, Xingbo;
Faull, Peter Allen;
Clark, Greg;
Roux, Stanley J.

Publication type:

Article

Comments on the paper "Extensive epigenomic dysregulation is a hallmark of homologous recombination deficiency in triple‐negative breast cancer" by Y. Chen et al.

Published in:

International Journal of Cancer, 2025, v. 157, n. 3, p. 588, doi. 10.1002/ijc.35433

By:

Lønning, Per Eystein;
Nikolaienko, Oleksii;
Knappskog, Stian

Publication type:

Article

Electroacupuncture ameliorates cartilage damage in a rat model of knee osteoarthritis and regulates expression of miRNAs and the TLR4/NF-κB pathway.

Published in:

Acupuncture in Medicine, 2025, v. 43, n. 3, p. 164, doi. 10.1177/09645284251342259

By:

Wang, Zhenzhen;
Zheng, Xiahai;
Lin, Jing;
Zhou, Bin;
Zeng, Zhenming;
Gao, Haiwei;
Chen, Haoxiong;
Tang, Chunzhi

Publication type:

Article

Screening and validation of 3'-Methoxydaidzein as a therapeutic agent in ulcerative colitis based on disulfidptosis-associated molecular clusters.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0324586

By:

Yuan, Jie;
Gao, Chongyong;
Xin, Wang;
Meng, Fanlin;
Zhang, Hong

Publication type:

Article

Changes in Physiological Traits, Gene Expression and Phytochemical Profile of Mentha piperita in Response to Elicitor.

Published in:

Biochemical Genetics, 2025, v. 63, n. 3, p. 2025, doi. 10.1007/s10528-024-10805-6

By:

Afkar, Soheila;
Karimzadeh, Ghasem

Publication type:

Article

Identification of Hub Genes in Liver Hepatocellular Carcinoma Based on Weighted Gene Co-expression Network Analysis.

Published in:

Biochemical Genetics, 2025, v. 63, n. 3, p. 2120, doi. 10.1007/s10528-024-10803-8

By:

Sun, Jiawei;
Zhang, Zizhen;
Cai, Jiaru;
Li, Xiaoping;
Xu, Xiaoling

Publication type:

Article

Different In Vitro Models of Chronic Myeloid Leukemia Show Different Characteristics: Biological Replicates Are Not Biologically Equivalent.

Published in:

Cell Biology International, 2025, v. 49, n. 5, p. 570, doi. 10.1002/cbin.70007

By:

Cavalleri, Alessia;
Xhahysa, Besjana;
Mutti, Silvia;
Ferraro, Rosalba Monica;
Mazzoldi, Elena Laura;
Farina, Mirko;
Leoni, Alessandro;
Garuffo, Luca;
Trenta, Federica;
Re, Federica;
Radici, Vera;
Buttini, Eugenia Accorsi;
Morello, Enrico;
Magliano, Gabriele;
Cancelli, Valeria;
Giliani, Silvia Clara;
Malagola, Michele;
Russo, Domenico;
Bernardi, Simona

Publication type:

Article

EIF3B affects the invasion and metastasis of hepatocellular carcinoma cells via the TGFBI/MAPK/ERK pathway.

Published in:

Annals of Hepatology: Official Journal of the Mexican Association of Hepatology, 2025, v. 30, n. 1, p. 1, doi. 10.1016/j.aohep.2024.101564

By:

Ling Wang;
Chuanzhong Huang;
Wansong Lin;
Zhifeng Zhou;
Jieyu Li;
Mingshui Chen;
Lingyu Zhang;
Yunbin Ye

Publication type:

Article

Astragalus polysaccharide protects against cardiac injury in a tnnt2a mutant zebrafish model of dilated cardiomyopathy.

Published in:

BMC Complementary Medicine & Therapies, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12906-025-04925-8

By:

Zhou, Chang;
Zhao, Hui;
Peng, Longping;
Dong, Yidan;
Wu, Qiong;
Wang, Xu;
Xu, Yingjia;
Wang, Youhua

Publication type:

Article

基于双硫死亡相关长链非编码核糖核酸的结直肠癌预后风险模型的构建.

Published in:

Progress in Modern Biomedicine, 2025, v. 25, n. 10, p. 1601, doi. 10.13241/j.cnki.pmb.2025.10.001

By:

傅祥炜;
向世强;
林卓

Publication type:

Article

Heat tolerance and genetic adaptations in Caenorhabditis briggsae: insights from comparative studies with Caenorhabditis elegansOpen Access.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf061

By:

Jhaveri, Nikita;
Bhullar, Harvir;
Sternberg, Paul W;
Gupta, Bhagwati P

Publication type:

Article

Pairing between homologous sequences on the X and chromosome 3 in Drosophila male meiosis.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf059

By:

Hylton, Christopher A;
Hansen, Katie;
Dean, John E Tomkiel

Publication type:

Article

Effects of hybridization and gene flow on gene co-expression networks.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf057

By:

Runghen, Rogini;
Bolnick, Daniel I

Publication type:

Article

Correlation Between Interferon Response Gene Score and Disease Activity in Juvenile Dermatomyositis.

Published in:

Journal of Rheumatology, 2025, v. 52, n. 6, p. 604, doi. 10.3899/jrheum.2024-0806

By:

MacMahon, Jayne M.;
Massumi, Mohammad;
Duong, Trang T.;
Garrett, Rose H.;
Bell-Peter, Audrey;
Whitney, Kristi;
Marcuz, Jo-Anne;
Goh, Y. Ingrid;
Yeung, Rae S. M.;
Feldman, Brian M.

Publication type:

Article

Clinical application of the urinary lipoarabinomannan (AIMLAM) test in PLHIV with TB.

Published in:

AIDS Research & Therapy, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12981-025-00754-4

By:

Lu, Jie;
Li, Xia;
Liu, Hengli;
Dong, Xinqi;
Zhang, Shuangmei;
Wu, Xingqian;
Yan, Feiyu;
Zhang, Yanyun;
Wang, Xi;
Gao, Ai;
Dou, Jiachen

Publication type:

Article

凤梨薄荷SDR基因家族全基因组鉴定及表达分析.

Published in:

Biotechnology Bulletin, 2025, v. 41, n. 5, p. 175, doi. 10.13560/j.cnki.biotech.bull.1985.2024-0997

By:

吴娅;
姚润;
杨含婷;
刘微;
杨帅;
宋驰;
陈士林

Publication type:

Article

Transcriptome Analysis of Porphyromonas gingivalis Lipopolysaccharide‐Induced Early Gene Expression in Human Gingival Keratinocytes.

Published in:

Journal of Periodontal Research, 2025, v. 60, n. 4, p. 380, doi. 10.1111/jre.13353

By:

Ostadkarampour, Mahyar;
Putnins, Edward E.

Publication type:

Article

CD24, NFIL3, FN1, and KLRK1 signature predicts melanoma immunotherapy response and survival.

Published in:

Journal of Molecular Medicine, 2025, v. 103, n. 6, p. 725, doi. 10.1007/s00109-025-02550-z

By:

Sorroche, Bruna Pereira;
de Jesus Teixeira, Renan;
de Souza, Vinicius Gonçalves;
Tosi, Isabela Cristiane;
Tostes, Katiane;
Laus, Ana Carolina;
Santana, Iara Viana Vidigal;
de Lima Vazquez, Vinicius;
Arantes, Lidia Maria Rebolho Batista

Publication type:

Article

Differential effects of different time windows of postnatal perfluorooctane sulfonate exposure on cognitive development in mouse hippocampus.

Published in:

Journal of Toxicological Sciences, 2025, v. 50, n. 5, p. 223, doi. 10.2131/jts.50.223

By:

Ayane Ninomiya;
Asahi Haijima;
Yuki Fujiwara;
Reika Kawabata-Iwakawa;
Izuki Amano;
Noriyuki Koibuchi

Publication type:

Article

Transcriptomic Profiles and Functional Correlates of Cancer‐Related Fatigue: A Cross‐Sectional Study in Women Undergoing Cancer Treatment.

Published in:

European Journal of Cancer Care, 2025, v. 2025, p. 1, doi. 10.1155/ecc/1092518

By:

Kleckner, Amber S.;
Mocci, Evelina;
Clingan, Carin L.;
Youngblood, Shari M.;
Rosenblatt, Paula Y.;
Tkaczuk, Katherine H. R.;
Kleckner, Ian R.;
Dorsey, Susan G.;
Sahgal, Pranshu

Publication type:

Article

Single-cell analysis reveals significant transcriptomic alterations in preclinical Crohn's disease.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1539830

By:

Kioroglou, Dimitrios;
Egia-Mendikute, Leire;
Palazon, Asis;
Barreiro-de Acosta, Manuel;
Rodríguez-Lago, Iago;
Marigorta, Urko M.

Publication type:

Article

High-Throughput Hybridization Assay as First-Line Diagnostic Test for Sarcomas: Clinical Assessment in a Tertiary Referral Center.

Published in:

Archives of Pathology & Laboratory Medicine, 2025, v. 149, n. 6, p. 511, doi. 10.5858/arpa.2024-0202-OA

By:

Salguero-Aranda, Carmen;
Perez, Marco;
Vargas-Padilla, María Victoria;
Beltrán-Povea, Amparo;
Delgado-Bellido, Daniel;
Marcilla, David;
Civantos, Gema;
de Álava, Enrique;
Díaz-Martín, Juan

Publication type:

Article

Identification of biomarkers and immune infiltration associated with sexes in SSc: a bioinformatics and machine learning.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 3806, doi. 10.1093/rheumatology/keaf134

By:

Tian, Yi'an;
Chen, Shuyu;
Yu, Bingrui;
Chen, Yu;
Jia, Siyuan;
Wang, Huifang;
Zhu, Li;
Tian, Zhaofang

Publication type:

Article

A predictive model based on the gut microbiota improves the diagnostic effect in patients with rheumatoid arthritis.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 4014, doi. 10.1093/rheumatology/keae706

By:

Wang, Qi;
Li, Chen-Long;
Yu, Si-Yuan;
Dong, Hui-Jing;
Yang, Lei;
Liu, Yang;
He, Pei-Feng;
Zhang, Sheng-Xiao;
Yu, Qi

Publication type:

Article

Elevated Fcy receptor expression augments pro-inflammatory macrophage phagocytosis in systemic sclerosis and associated rheumatic diseases Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 3975, doi. 10.1093/rheumatology/keae688

By:

Hukara, Amela;
Bonazza, Gino A;
Tabib, Tracy;
Micheroli, Raphael;
Jordan, Suzana;
Bürki, Kristina;
Rudnik, Michal;
Ciurea, Adrian;
Distler, Oliver;
Lafyatis, Robert;
Błyszczuk, Przemysław;
Kania, Gabriela

Publication type:

Article

Low remission rates and high incidence of adverse events in a prospective VEXAS syndrome registry.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 3872, doi. 10.1093/rheumatology/keae530

By:

Kirino, Yohei;
Maeda, Ayaka;
Asano, Tomoyuki;
Migita, Kiyoshi;
Hidaka, Yukiko;
Ida, Hiroaki;
Kobayashi, Daisuke;
Oda, Nobuhiro;
Rokutanda, Ryo;
Fujieda, Yuichiro;
Atsumi, Tatsuya;
Kishida, Dai;
Kobayashi, Hiroshi;
Shiratsuchi, Motoaki;
Shimizu, Toshimasa;
Kawakami, Atsushi;
Tanaka, Kazuki;
Tsuji, Tomohiro;
Mishima, Koji;
Miyamae, Takako

Publication type:

Article

The lactylation–immune regulatory axis: a potential therapeutic target for migraine prevention and treatment.

Published in:

Journal of Headache & Pain, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s10194-025-02075-3

By:

Wang, Liu;
Lan, Zhixuan;
He, Ying;
Cheng, Yue;
He, Ruilin;
Jiang, Zongbin

Publication type:

Article

Upregulation of microRNA-3687 promotes gestational diabetes mellitus by inhibiting follistatin-like 3.

Published in:

Journal of Perinatal Medicine, 2025, v. 53, n. 5, p. 604, doi. 10.1515/jpm-2024-0509

By:

Jiang, Yan;
Zhao, Xuehan;
Fang, Ying;
Yang, Xiaokui

Publication type:

Article

Genome-wide identification of bHLH transcription factors related to plant development and abiotic stress response in sand rice (Agriophyllum squarrosum (L.) Moq.)).

Published in:

Genetica, 2025, v. 153, n. 1, p. 1, doi. 10.1007/s10709-025-00238-3

By:

Zhang, Ruizhen;
Cui, Xiaoyun;
Li, Xiaofeng;
Zhao, Pengshan

Publication type:

Article

Characterization of Genetic Landscape and Novel Inflammatory Biomarkers in Patients With Adult‐Onset Still's Disease.

Published in:

Arthritis & Rheumatology, 2025, v. 77, n. 5, p. 582, doi. 10.1002/art.43054

By:

Topping, Joanne;
Chang, Leon;
Nadat, Fatima;
Poulter, James A.;
Ibbotson, Alice;
Lara‐Reyna, Samuel;
Watson, Christopher M.;
Carter, Clive;
Pournara, Linda P.;
Zernicke, Jan;
Ross, Rebecca L.;
Cargo, Catherine;
Lyons, Paul A.;
Smith, Kenneth G. C.;
Del Galdo, Francesco;
Rech, Jürgen;
Fautrel, Bruno;
Feist, Eugen;
McDermott, Michael F.;
Savic, Sinisa

Publication type:

Article

Upregulation of hsa_circ_0000745/hsa_circRNA_101996 in peripheral blood monocytes is associated with coronary heart disease.

Published in:

Journal of Laboratory Medicine, 2025, v. 49, n. 3, p. 129, doi. 10.1515/labmed-2024-0088

By:

Li, Shanshan;
Shi, Miaomiao;
Gele, Teri;
Zhang, Aimin;
Li, Wenyi;
Sun, Yi;
Wang, Chunyan;
Zhao, Jie;
Pei, Lin;
Liu, Jian;
Jia, Mei

Publication type:

Article

Exploring the landscape of Parkinson's disease transcriptomics: a quantitative review of research progress and future directions.

Published in:

Frontiers in Aging Neuroscience, 2025, p. 1, doi. 10.3389/fnagi.2025.1505374

By:

Wang, Yiran;
Li, Tong;
Zhang, Xiaoqing;
Tai, Haoran;
Li, Weihong;
Su, Bingyin

Publication type:

Article

早期肝癌相关抗原CTAG1A在肝细胞癌组织与细胞中的表达及其细胞毒性T淋巴细胞抗原表位鉴定

Published in:

Chinese Journal of Cancer Biotherapy, 2025, v. 32, n. 3, p. 270, doi. 10.3872/j.issn.1007-385x.2025.03.006

By:

刘傅言;
危晏平;
付靖波;
李亮;
王红阳

Publication type:

Article

负载BMSC来源纳米囊泡的硒化透明质酸水凝胶的制备及其对胶质瘤 GL261 细胞的杀伤作用

Published in:

Chinese Journal of Cancer Biotherapy, 2025, v. 32, n. 3, p. 247, doi. 10.3872/j.issn.1007-385x.2025.03.003

By:

张转转;
周旋;
陈翠敏;
张停琳;
高洁

Publication type:

Article

Causal Association Between Lung Cancer and Rash: A Bidirectional Mendelian Randomization Study.

Published in:

Clinical Medicine Insights: Oncology, 2025, p. 1, doi. 10.1177/11795549251341559

By:

Xiao, Yang;
Li, Tian-Tian;
Yuan, Ming Li;
Yin, Wen;
Zhu, Jing

Publication type:

Article

Integrative molecular subtyping and diagnostic model construction for Moyamoya disease based on diverse programmed cell death gene patterns.

Published in:

Orphanet Journal of Rare Diseases, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13023-025-03816-y

By:

Tang, Qikai;
Ma, Chenfeng;
Li, Hu;
Xie, Jiaheng;
Bian, Weiqi;
Lu, Qingyu;
Wan, Zeyu;
Wu, Wei

Publication type:

Article

Immunohistochemical Analysis of Oral Spindle Cell Hemangioma.

Published in:

Journal of Dentistry (2345-6485), 2025, v. 26, n. 2, p. 194, doi. 10.30476/dentjods.2024.101499.2305

By:

Mani, Amit;
Bajpai, Manas;
Sabnis, Saurabh L

Publication type:

Article

Genomic landscape and homologous recombination repair deficiency signature in stage I-III and de novo stage IV primary breast cancers.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf089

By:

Jeon, June E;
Chen, Kuei-Ting;
Madison, Russell;
Schrock, Alexa B;
Sokol, Ethan;
Levy, Mia A;
Rozenblit, Mariya;
Huang, Richard S P;
Pusztai, Lajos

Publication type:

Article

MDM2 as a therapeutic target in advanced biliary tract cancers.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf094

By:

Spencer, Kristen R;
King, Gentry G

Publication type:

Article