Works matching AU Malik, Harmit S.

Results: 66

The evolutionary conundrum of pathogen mimicry.

Published in:

Nature Reviews Microbiology, 2009, v. 7, n. 11, p. 787, doi. 10.1038/nrmicro2222

By:

Elde, Nels C.;
Malik, Harmit S.

Publication type:

Article

Genes get diabolical.

Published in:

2007

By:

Malik, Harmit S.

Publication type:

Book Review

Evolutionary Analyses Suggest a Function of MxB Immunity Proteins Beyond Lentivirus Restriction.

Published in:

PLoS Pathogens, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.ppat.1005304

By:

Mitchell, Patrick S.;
Young, Janet M.;
Emerman, Michael;
Malik, Harmit S.

Publication type:

Article

Discordant Evolution of the Adjacent Antiretroviral Genes TRIM22 and TRIM5 in Mammals.

Published in:

PLoS Pathogens, 2007, v. 3, n. 12, p. e197, doi. 10.1371/journal.ppat.0030197

By:

Sawyer, Sara L.;
Emerman, Michael;
Malik, Harmit S.

Publication type:

Article

Combinatorial mutagenesis of rapidly evolving residues yields super-restrictor antiviral proteins.

Published in:

PLoS Biology, 2019, v. 17, n. 10, p. 1, doi. 10.1371/journal.pbio.3000181

By:

Colón-Thillet, Rossana;
Hsieh, Emily;
Graf, Laura;
JrMcLaughlin, Richard N.;
Young, Janet M.;
Kochs, Georg;
Emerman, Michael;
Malik, Harmit S.

Publication type:

Article

A hitchhiker's guide to survival finally makes CENs.

Published in:

Journal of Cell Biology, 2006, v. 174, n. 6, p. 747, doi. 10.1083/jcb.200608107

By:

Malik, Harmit S.

Publication type:

Article

An actin-related protein that is most highly expressed in Drosophila testes is critical for embryonic development.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.71279

By:

Schroeder, Courtney M.;
Tomlin, Sarah A.;
Natividad, Isabel Mejia;
Valenzuela, John R.;
Young, Janet M.;
Malik, Harmit S.

Publication type:

Article

A functional map of HIV-host interactions in primary human T cells.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29346-w

By:

Hiatt, Joseph;
Hultquist, Judd F.;
McGregor, Michael J.;
Bouhaddou, Mehdi;
Leenay, Ryan T.;
Simons, Lacy M.;
Young, Janet M.;
Haas, Paige;
Roth, Theodore L.;
Tobin, Victoria;
Wojcechowskyj, Jason A.;
Woo, Jonathan M.;
Rathore, Ujjwal;
Cavero, Devin A.;
Shifrut, Eric;
Nguyen, Thong T.;
Haas, Kelsey M.;
Malik, Harmit S.;
Doudna, Jennifer A.;
May, Andrew P.

Publication type:

Article

Putting the brakes on centromere drive in Mimulus.

Published in:

PLoS Genetics, 2021, v. 17, n. 4, p. 1, doi. 10.1371/journal.pgen.1009494

By:

Chang, Ching-Ho;
Malik, Harmit S.

Publication type:

Article

Gametic specialization of centromeric histone paralogs in Drosophila virilis.

Published in:

Life Science Alliance, 2021, v. 4, n. 7, p. 1, doi. 10.26508/lsa.202000992

By:

Kursel, Lisa E.;
McConnell, Hannah;
de la Cruz, Aida Flor A.;
Malik, Harmit S.

Publication type:

Article

A Surrogate Approach to Study the Evolution of Noncoding DNA Elements That Organize Eukaryotic Genomes.

Published in:

Journal of Heredity, 2009, v. 100, n. 5, p. 624, doi. 10.1093/jhered/esp063

By:

Vermaak, Danielle;
Bayes, Joshua J.;
Malik, Harmit S.

Publication type:

Article

Driving lessons: a brief (personal) history of centromere drive.

Published in:

Genetics, 2022, v. 222, n. 4, p. 1, doi. 10.1093/genetics/iyac155

By:

Malik, Harmit S.

Publication type:

Article

Waddington Redux: De Novo Mutations Underlie the Genetic Assimilation of Stress-Induced Phenocopies in Drosophila melanogaster.

Published in:

Genetics, 2017, v. 207, n. 1, p. 49, doi. 10.1534/genetics.117.205039

By:

Kasinathan, Bhavatharini;
Ahmad, Kami;
Malik, Harmit S.

Publication type:

Article

Convergent Evolution of Escape from Hepaciviral Antagonism in Primates.

Published in:

PLoS Biology, 2012, v. 10, n. 3, p. 1, doi. 10.1371/journal.pbio.1001282

By:

Patel, Maulik R.;
Loo, Yueh-Ming;
Horner, Stacy M.;
Gale Jr., Michael;
Malik, Harmit S.

Publication type:

Article

Convergent Evolution of Escape from Hepaciviral Antagonism in Primates.

Published in:

PLoS Biology, 2012, v. 10, n. 1, p. 1

By:

Patel, Maulik R.;
Loo, Yueh-Ming;
Horner, Stacy M.;
Gale Jr, Michael;
Malik, Harmit S.

Publication type:

Article

Paleovirology--Modern Consequences of Ancient Viruses.

Published in:

2010

By:

Emerman, Michael;
Malik, Harmit S.

Publication type:

Essay

Ancient Adaptive Evolution of the Primate Antiviral DNA-Editing Enzyme APOBEC3G.

Published in:

PLoS Biology, 2004, v. 2, n. 7, p. 1, doi. 10.1371/journal.pbio.0020275

By:

Sawyer, Sara L;
Emerman, Michael;
Malik, Harmit S

Publication type:

Article

Recognition of phylogenetically diverse pathogens through enzymatically amplified recruitment of RNF213.

Published in:

EMBO Reports, 2024, v. 25, n. 11, p. 4979, doi. 10.1038/s44319-024-00280-w

By:

Crespillo-Casado, Ana;
Pothukuchi, Prathyush;
Naydenova, Katerina;
Yip, Matthew C J;
Young, Janet M;
Boulanger, Jerome;
Dharamdasani, Vimisha;
Harper, Ceara;
Hammoudi, Pierre-Mehdi;
Otten, Elsje G;
Boyle, Keith;
Gogoi, Mayuri;
Malik, Harmit S;
Randow, Felix

Publication type:

Article

Diamonds and rust: how transposable elements influence mammalian genomes. Conference on Mobile Elements in Mammalian Genomes.

Published in:

EMBO Reports, 2009, v. 10, n. 12, p. 1306, doi. 10.1038/embor.2009.248

By:

Moran, John V.;
Malik, Harmit S.

Publication type:

Article

Short H2A histone variants are expressed in cancer.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-020-20707-x

By:

Chew, Guo-Liang;
Bleakley, Marie;
Bradley, Robert K.;
Malik, Harmit S.;
Henikoff, Steven;
Molaro, Antoine;
Sarthy, Jay

Publication type:

Article

Phylogenomics of the nucleosome.

Published in:

Nature Structural Biology, 2003, v. 10, n. 11, p. 882, doi. 10.1038/nsb996

By:

Malik, Harmit S;
Henikoff, Steven

Publication type:

Article

The PLOS Biology XV Collection: 15 Years of Exceptional Science Highlighted across 12 Months.

Published in:

PLoS Biology, 2019, v. 17, n. 2, p. 1, doi. 10.1371/journal.pbio.3000180

By:

Richardson, Lauren A.;
Schmid, Sandra L.;
Bhandoola, Avinash;
Harly, Christelle;
Hedenström, Anders;
Laub, Michael T.;
Mace, Georgina M.;
Sengupta, Piali;
Stock, Ann M.;
Read, Andrew F.;
Malik, Harmit S.;
Estelle, Mark;
Lowell, Sally;
Kimmelman, Jonathan

Publication type:

Article

The gene drive bubble: New realities.

Published in:

PLoS Genetics, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pgen.1006850

By:

Bull, James J.;
Malik, Harmit S.

Publication type:

Article

The novel anti-CRISPR AcrIIA22 relieves DNA torsion in target plasmids and impairs SpyCas9 activity.

Published in:

PLoS Biology, 2021, v. 19, n. 10, p. 1, doi. 10.1371/journal.pbio.3001428

By:

Forsberg, Kevin J.;
Schmidtke, Danica T.;
Werther, Rachel;
Uribe, Ruben V.;
Hausman, Deanna;
Sommer, Morten O. A.;
Stoddard, Barry L.;
Kaiser, Brett K.;
Malik, Harmit S.

Publication type:

Article

Biparental contributions of the H2A.B histone variant control embryonic development in mice.

Published in:

PLoS Biology, 2020, v. 18, n. 12, p. 1, doi. 10.1371/journal.pbio.3001001

By:

Molaro, Antoine;
Wood, Anna J.;
Janssens, Derek;
Kindelay, Selina M.;
Eickbush, Michael T.;
Wu, Steven;
Singh, Priti;
Muller, Charles H.;
Henikoff, Steven;
Malik, Harmit S.

Publication type:

Article

Selfish drivers.

Published in:

Nature, 2002, v. 417, n. 6886, p. 227, doi. 10.1038/417227a

By:

Henikoff, Steven;
Malik, Harmit S.

Publication type:

Article

Expansion and loss of sperm nuclear basic protein genes in Drosophila correspond with genetic conflicts between sex chromosomes.

Published in:

eLife, 2023, p. 1, doi. 10.7554/eLife.85249

By:

Ching-Ho Chang;
Natividad, Isabel Mejia;
Malik, Harmit S.

Publication type:

Article

The function and evolution of the restriction factor viperin in primates was not driven by lentiviruses.

Published in:

Retrovirology, 2012, v. 9, n. 1, p. 55, doi. 10.1186/1742-4690-9-55

By:

Lim, Efrem S.;
Wu, Lily I.;
Malik, Harmit S.;
Emerman, Michael

Publication type:

Article

Widespread fungal–bacterial competition for magnesium lowers bacterial susceptibility to polymyxin antibiotics.

Published in:

PLoS Biology, 2024, v. 22, n. 6, p. 1, doi. 10.1371/journal.pbio.3002694

By:

Hsieh, Yu-Ying Phoebe;
Sun, Wanting;
Young, Janet M.;
Cheung, Robin;
Hogan, Deborah A.;
Dandekar, Ajai A.;
Malik, Harmit S.

Publication type:

Article

Ancient Lineages of Non-LTR Retrotransposons in the Primitive Eukaryote, Giardia lamblia.

Published in:

Molecular Biology & Evolution, 2002, v. 19, n. 5, p. 619, doi. 10.1093/oxfordjournals.molbev.a004121

By:

Burke, William D.;
Malik, Harmit S.;
Rich, Stephen M.;
Eickbush, Thomas H.

Publication type:

Article

Protein kinase R reveals an evolutionary model for defeating viral mimicry.

Published in:

2009

By:

Elde, Nels C.;
Child, Stephanie J.;
Geballe, Adam P.;
Malik, Harmit S.

Publication type:

Letter

Adaptive Evolution of Cid, a Centromere-Specific Histone in Drosophila.

Published in:

Genetics, 2001, v. 157, n. 3, p. 1293, doi. 10.1093/genetics/157.3.1293

By:

Malik, Harmit S.;
Henikoff, Steven

Publication type:

Article

NeSL-1, an ancient lineage of site-specific non-LTR retrotransposons from Caenorhabditis elegans.

Published in:

Genetics, 2000, v. 154, n. 1, p. 193, doi. 10.1093/genetics/154.1.193

By:

Malik, Harmit S.;
Eickbush, Thomas H.

Publication type:

Article

Retrotransposable elements R1 and R2 in the rDNA units of Drosophila mercatorum: Abnormal abdomen...

Published in:

Genetics, 1999, v. 151, n. 2, p. 653, doi. 10.1093/genetics/151.2.653

By:

Malik, Harmit S.;
Eickbush, Thomas H.

Publication type:

Article

An Evolutionary Screen Highlights Canonical and Noncanonical Candidate Antiviral Genes within the Primate TRIM Gene Family.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 11, p. 2141, doi. 10.1093/gbe/evt163

By:

Malfavon-Borja, Ray;
Sawyer, Sara L.;
Wu, Lily I.;
Emerman, Michael;
Malik, Harmit S.

Publication type:

Article

Hybridization promotes asexual reproduction in Caenorhabditis nematodes.

Published in:

PLoS Genetics, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pgen.1008520

By:

Lamelza, Piero;
Young, Janet M.;
Noble, Luke M.;
Caro, Lews;
Isakharov, Arielle;
Palanisamy, Meenakshi;
Rockman, Matthew V.;
Malik, Harmit S.;
Ailion, Michael

Publication type:

Article

The Diverse Evolutionary Histories of Domesticated Metaviral Capsid Genes in Mammals.

Published in:

Molecular Biology & Evolution, 2024, v. 41, n. 4, p. 1, doi. 10.1093/molbev/msae061

By:

Henriques, William S;
Young, Janet M;
Nemudryi, Artem;
Nemudraia, Anna;
Wiedenheft, Blake;
Malik, Harmit S

Publication type:

Article

Recurrent but Short-Lived Duplications of Centromeric Proteins in Holocentric Caenorhabditis Species.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 10, p. 1, doi. 10.1093/molbev/msac206

By:

Caro, Lews;
Raman, Pravrutha;
Steiner, Florian A;
Ailion, Michael;
Malik, Harmit S

Publication type:

Article

Novel Classes and Evolutionary Turnover of Histone H2B Variants in the Mammalian Germline.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 2, p. 1, doi. 10.1093/molbev/msac019

By:

Raman, Pravrutha;
Rominger, Mary C;
Young, Janet M;
Molaro, Antoine;
Tsukiyama, Toshio;
Malik, Harmit S

Publication type:

Article

Ancient Coretention of Paralogs of Cid Centromeric Histones and Cal1 Chaperones in Mosquito Species.

Published in:

Molecular Biology & Evolution, 2020, v. 37, n. 7, p. 1949, doi. 10.1093/molbev/msaa056

By:

Kursel, Lisa E;
Welsh, Frances C;
Malik, Harmit S

Publication type:

Article

Dynamic Evolution of De Novo DNA Methyltransferases in Rodent and Primate Genomes.

Published in:

Molecular Biology & Evolution, 2020, v. 37, n. 7, p. 1882, doi. 10.1093/molbev/msaa044

By:

Molaro, Antoine;
Malik, Harmit S;
Bourc'his, Deborah

Publication type:

Article

A Burst of Genetic Innovation in Drosophila Actin-Related Proteins for Testis-Specific Function.

Published in:

Molecular Biology & Evolution, 2020, v. 37, n. 3, p. 757, doi. 10.1093/molbev/msz262

By:

Schroeder, Courtney M;
Valenzuela, John R;
Natividad, Isabel Mejia;
Hocky, Glen M;
Malik, Harmit S

Publication type:

Article

Rapidly Evolving Toll-3/4 Genes Encode Male-Specific Toll-Like Receptors in Drosophila.

Published in:

Molecular Biology & Evolution, 2017, v. 34, n. 9, p. 2307, doi. 10.1093/molbev/msx168

By:

Levin, Tera C.;
Malik, Harmit S.

Publication type:

Article

Recurrent Gene Duplication Leads to Diverse Repertoires of Centromeric Histones in Drosophila Species.

Published in:

Molecular Biology & Evolution, 2017, v. 34, n. 6, p. 1445, doi. 10.1093/molbev/msx091

By:

Kursel, Lisa E.;
Malik, Harmit S.

Publication type:

Article

Conservation and Innovation of APOBEC3A Restriction Functions during Primate Evolution.

Published in:

Molecular Biology & Evolution, 2016, v. 33, n. 8, p. 1889, doi. 10.1093/molbev/msw070

By:

McLaughlin Jr, Richard N.;
Gable, Jacob T.;
Wittkopp, Cristina J.;
Emerman, Michael;
Malik, Harmit S.

Publication type:

Article

Recurrent Gene Duplication Diversifies Genome Defense Repertoire in Drosophila.

Published in:

Molecular Biology & Evolution, 2016, v. 33, n. 7, p. 1641, doi. 10.1093/molbev/msw053

By:

Levine, Mia T.;
Wende, Helen M. Vander;
Hsieh, Emily;
Baker, Emily-Clare P.;
Malik, Harmit S.

Publication type:

Article

Birth, Death, and Replacement of Karyopherins in Drosophila.

Published in:

Molecular Biology & Evolution, 2012, v. 29, n. 5, p. 1429, doi. 10.1093/molbev/msr306

By:

Phadnis, Nitin;
Hsieh, Emily;
Malik, Harmit S.

Publication type:

Article

Transferred interbacterial antagonism genes augment eukaryotic innate immune function.

Published in:

Nature, 2015, v. 518, n. 7537, p. 98, doi. 10.1038/nature13965

By:

Chou, Seemay;
Daugherty, Matthew D.;
Peterson, S. Brook;
Biboy, Jacob;
Yang, Youyun;
Jutras, Brandon L.;
Fritz-Laylin, Lillian K.;
Ferrin, Michael A.;
Harding, Brittany N.;
Jacobs-Wagner, Christine;
Yang, X. Frank;
Vollmer, Waldemar;
Malik, Harmit S.;
Mougous, Joseph D.

Publication type:

Article

Innovation of heterochromatin functions drives rapid evolution of essential ZAD-ZNF genes in Drosophila.

Published in:

eLife, 2020, p. 1, doi. 10.7554/eLife.63368

By:

Kasinathan, Bhavatharini;
Colmenares III, Serafin U.;
McConnell, Hannah;
Young, Janet M.;
Karpen, Gary H.;
Malik, Harmit S.

Publication type:

Article

A natural variant of the essential host gene MMS21 restricts the parasitic 2-micron plasmid in Saccharomyces cerevisiae.

Published in:

eLife, 2020, p. 1, doi. 10.7554/eLife.62337

By:

Hays, Michelle;
Young, Janet M.;
Levan, Paula F.;
Malik, Harmit S.

Publication type:

Article