Works matching IS 03051048 AND DT 2006 AND VI 34 AND IP 1

Results: 46

Rapid quantitative profiling of complex microbial populations.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. e5, doi. 10.1093/nar/gnj007

By:

Palmer, Chana;
Bik, Elisabeth M.;
Eisen, Michael B.;
Eckburg, Paul B.;
Sana, Theodore R.;
Wolber, Paul K.;
Relman, David A.;
Brown, Patrick O.

Publication type:

Article

TaqMan probe array for quantitative detection of DNA targets.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. e4, doi. 10.1093/nar/gnj006

By:

Liu, Heping;
Wang, Hong;
Shi, Zhiyang;
Wang, Hua;
Yang, Chaoyong;
Silke, Spering;
Tan, Weihong;
Lu, Zuhong

Publication type:

Article

A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. e3

By:

Ou, Hong-Yu;
Chen, Ling-Ling;
Lonnen, James;
Chaudhuri, Roy R.;
Thani, Ali Bin;
Smith, Rebecca;
Garton, Natalie J.;
Hinton, Jay;
Pallen, Mark;
Barer, Michael R.;
Rajakumar, Kumar

Publication type:

Article

Fast chromatin immunoprecipitation assay.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. e2, doi. 10.1093/nar/gnj004

By:

Nelson, Joel D.;
Denisenko, Oleg;
Sova, Pavel;
Bomsztyk, Karol

Publication type:

Article

Four-base codon mediated mRNA display to construct peptide libraries that contain multiple nonnatural amino acids.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. e7, doi. 10.1093/nar/gnj003

By:

Muranaka, Norihito;
Hohsaka, Takahiro;
Sisido, Masahiko

Publication type:

Article

A systematic approach to infer biological relevance and biases of gene network structures.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. e6, doi. 10.1093/nar/gnj002

By:

Antonov, Alexey V.;
Tetko, Igor V.;
Mewes, Hans W.

Publication type:

Article

Inducible model for β-six-mediated site-specific recombination in mammalian cells.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. e1, doi. 10.1093/nar/gnj001

By:

Servert, Pilar;
Garcia-Castro, Javier;
Díaz, Vicente;
Lucas, Daniel;
Gonzalez, Manuel A.;
Martínez-A, Carlos;
Bernad, Antonio

Publication type:

Article

Enhancing the efficiency of a polymerase chain reaction using gold nanoparticles.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 396

By:

Li, Min;
Lin, Yu-Cheng;
Wu, Chao-Chin;
Liu, Hsiao-Sheng

Publication type:

Article

Preferential formation of (5S,6R)-thymine glycol for oligodeoxyribonucleotide synthesis and analysis of drug binding to thymine glycol-containing DNA.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 313, doi. 10.1093/nar/gkj443

By:

Shimizu, Tatsuhiko;
Manabe, Koichiro;
Yoshikawa, Shinya;
Kawasaki, Yusuke;
Iwai, Shigenori

Publication type:

Article

The hepatitis B virus PRE contains a splicing regulatory element.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 353, doi. 10.1093/nar/gkj440

By:

Heise, Tilman;
Sommer, Gunhild;
Reumann, Kerstin;
Meyer, Imke;
Will, Hans;
Schaal, Heiner

Publication type:

Article

Insights into the kinetics of siRNA-mediated gene silencing from live-cell and live-animal bioluminescent imaging.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 322, doi. 10.1093/nar/gkj439

By:

Bartlett, Derek W.;
Davis, Mark E.

Publication type:

Article

The role of positively charged amino acids and electrostatic interactions in the complex of U1A protein and U1 hairpin II RNA.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 275, doi. 10.1093/nar/gkj436

By:

Law, Michael J.;
Linde, Michael E.;
Chambers, Eric J.;
Oubridge, Chris;
Katsamba, Phinikoula S.;
Nilsson, Lennart;
Haworth, Ian S.;
Laird-Offringa, Ite A.

Publication type:

Article

Stabilities of HIV-1 DIS type RNA loop–loop interactions in vitro and in vivo.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 334, doi. 10.1093/nar/gkj435

By:

Lorenz, Christina;
Piganeau, Nicolas;
Schroeder, Renée

Publication type:

Article

Translation of chloroplast psbD mRNA in Chlamydomonas is controlled by a secondary RNA structure blocking the AUG start codon.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 386, doi. 10.1093/nar/gkj433

By:

Klinkert, Birgit;
Elles, Ingolf;
Nickelsen, Jörg

Publication type:

Article

Real-time observation of DNA looping dynamics of Type IIE restriction enzymes NaeI and NarI.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 167, doi. 10.1093/nar/gkj432

By:

Broek, Bram van den;
Vanzi, Francesco;
Normanno, Davide;
Pavone, Francesco S.;
Wuite, Gijs J.L.

Publication type:

Article

Linking uracil base excision repair and 5-fluorouracil toxicity in yeast.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 140, doi. 10.1093/nar/gkj430

By:

Seiple, Lauren;
Jaruga, Pawel;
Dizdaroglu, Miral;
Stivers, James T.

Publication type:

Article

A novel multifunctional factor involved in trans-splicing of chloroplast introns in Chlamydomonas.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 262, doi. 10.1093/nar/gkj429

By:

Merendino, Livia;
Perron, Karl;
Rahire, Michèle;
Howald, Isabelle;
Rochaix, Jean-David;
Goldschmidt-Clermont, Michel

Publication type:

Article

Structural and dynamic basis of a supercoiling-responsive DNA element.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 254, doi. 10.1093/nar/gkj428

By:

Bae, Sung-Hun;
Yun, Sang Hoon;
Sun, Dawei;
Lim, Heon M.;
Choi, Byong-Seok

Publication type:

Article

A new NMR solution structure of the SL1 HIV-1Lai loop–loop dimer.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 343, doi. 10.1093/nar/gkj427

By:

Kieken, Fabien;
Paquet, Françoise;
Brulé, Fabienne;
Paoletti, Jacques;
Lancelot, Gérard

Publication type:

Article

Selection of primer-template sequences that bind human immunodeficiency virus reverse transcriptase with high affinity.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 130, doi. 10.1093/nar/gkj426

By:

DeStefano, Jeffrey J.;
Cristofaro, Jason V.

Publication type:

Article

Brain-specific promoter and polyadenylation sites of the β-adducin pre-mRNA generate an unusually long 3′-UTR.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 243, doi. 10.1093/nar/gkj425

By:

Costessi, Luisa;
Devescovi, Giulia;
Baralle, Francisco E.;
Muro, Andrés F.

Publication type:

Article

Serine/arginine-rich splicing factors belong to a class of intrinsically disordered proteins.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 305, doi. 10.1093/nar/gkj424

By:

Haynes, Chad;
Iakoucheva, Lilia M.

Publication type:

Article

MSH2 is essential for the preservation of genome integrity and prevents homeologous recombination in the moss Physcomitrella patens.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 232, doi. 10.1093/nar/gkj423

By:

Trouiller, Bénédicte;
Schaefer, Didier G.;
Charlot, Florence;
Nogué, Fabien

Publication type:

Article

Functional role of NF-IL6β and its sumoylation and acetylation modifications in promoter activation of cyclooxygenase 2 gene.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 217, doi. 10.1093/nar/gkj422

By:

Wang, Ju-Ming;
Ko, Chiung-Yuan;
Chen, Lei-Chin;
Wang, Wen-Lin;
Chang, Wen-Chang

Publication type:

Article

Resolution of a structural competition involving dimeric G-quadruplex and its C-rich complementary strand.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 206, doi. 10.1093/nar/gkj421

By:

Jaumot, Joaquim;
Eritja, Ramon;
Tauler, Romà;
Gargallo, Raimundo

Publication type:

Article

Fluorescence of covalently attached pyrene as a general RNA folding probe.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 152, doi. 10.1093/nar/gkj420

By:

Smalley, Mary K.;
Silverman, Scott K.

Publication type:

Article

Application of a superword array in genome assembly.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 201, doi. 10.1093/nar/gkj419

By:

Huang, Xiaoqiu;
Yang, Shiaw-Pyng;
Chinwalla, Asif T.;
Hillier, LaDeana W.;
Minx, Patrick;
Mardis, Elaine R.;
Wilson, Richard K.

Publication type:

Article

Role of LrpC from Bacillus subtilis in DNA transactions during DNA repair and recombination.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 120, doi. 10.1093/nar/gkj418

By:

López-Torrejón, Gema;
Martínez-Jiménez, María I.;
Ayora, Silvia

Publication type:

Article

High incidence of rapid telomere loss in telomerase-deficient Caenorhabditis elegans.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 96, doi. 10.1093/nar/gkj417

By:

Cheung, Iris;
Schertzer, Michael;
Rose, Ann;
Lansdorp, Peter M.

Publication type:

Article

APOBEC3A and APOBEC3B are potent inhibitors of LTR-retrotransposon function in human cells.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 89, doi. 10.1093/nar/gkj416

By:

Bogerd, Hal P.;
Wiegand, Heather L.;
Doehle, Brian P.;
Lueders, Kira K.;
Cullen, Bryan R.

Publication type:

Article

Evolutionary-conserved telomere-linked helicase genes of fission yeast are repressed by silencing factors, RNAi components and the telomere-binding protein Taz1.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 78, doi. 10.1093/nar/gkj415

By:

Hansen, Klavs R.;
Ibarra, Pablo Tejero;
Thon, Geneviève

Publication type:

Article

TBP flanking sequences: asymmetry of binding, long-range effects and consensus sequences.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 104, doi. 10.1093/nar/gkj414

By:

Faiger, Hana;
Ivanchenko, Marina;
Cohen, Ilana;
Haran, Tali E.

Publication type:

Article

A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 185, doi. 10.1093/nar/gkj413

By:

Sartor, Maureen A.;
Zorn, Aaron M.;
Schwanekamp, Jennifer A.;
Halbleib, Danielle;
Karyala, Saikumar;
Howell, Michael L.;
Dean, Gary E.;
Medvedovic, Mario;
Tomlinson, Craig R.

Publication type:

Article

Dispersal and regulation of an adaptive mutagenesis cassette in the bacteria domain.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 66, doi. 10.1093/nar/gkj412

By:

Erill, Ivan;
Campoy, Susana;
Mazon, Gerard;
Barbé, Jordi

Publication type:

Article

Mg2+ dependency of HIV-1 reverse transcription, inhibition by nucleoside analogues and resistance.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 42, doi. 10.1093/nar/gkj411

By:

Goldschmidt, Valérie;
Didierjean, Joël;
Ehresmann, Bernard;
Ehresmann, Chantal;
Isel, Catherine;
Marquet, Roland

Publication type:

Article

Cockayne syndrome group B protein has novel strand annealing and exchange activities.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 295, doi. 10.1093/nar/gkj410

By:

Muftuoglu, Meltem;
Sharma, Sudha;
Thorslund, Tina;
Stevnsner, Tinna;
Soerensen, Martin M.;
Brosh, Robert M.;
Bohr, Vilhelm A.

Publication type:

Article

XRCC1 is phosphorylated by DNA-dependent protein kinase in response to DNA damage.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 32, doi. 10.1093/nar/gkj409

By:

Lévy, Nicolas;
Martz, Adeline;
Bresson, Anne;
Spenlehauer, Catherine;
de Murcia, Gilbert;
Ménissier-de Murcia, Josiane

Publication type:

Article

Alternative splicing regulation at tandem 3′ splice sites.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 23, doi. 10.1093/nar/gkj408

By:

Akerman, Martin;
Mandel-Gutfreund, Yael

Publication type:

Article

Characterization of sequences and mechanisms through which ISE/ISS-3 regulates FGFR2 splicing.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 373, doi. 10.1093/nar/gkj407

By:

Hovhannisyan, Ruben H.;
Warzecha, Claude C.;
Carstens, Russ P.

Publication type:

Article

MaGe: a microbial genome annotation system supported by synteny results.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 53, doi. 10.1093/nar/gkj406

By:

Vallenet, David;
Labarre, Laurent;
Rouy, Zoé;
Barbe, Valérie;
Bocs, Stéphanie;
Cruveiller, Stéphane;
Lajus, Aurélie;
Pascal, Géraldine;
Scarpelli, Claude;
Médigue, Claudine

Publication type:

Article

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 1, doi. 10.1093/nar/gkj405

By:

Riley, Monica;
Abe, Takashi;
Arnaud, Martha B.;
Berlyn, Mary K.B.;
Blattner, Frederick R.;
Chaudhuri, Roy R.;
Glasner, Jeremy D.;
Horiuchi, Takashi;
Keseler, Ingrid M.;
Kosuge, Takehide;
Mori, Hirotada;
Perna, Nicole T.;
Plunkett, Guy;
Rudd, Kenneth E.;
Serres, Margrethe H.;
Thomas, Gavin H.;
Thomson, Nicholas R.;
Wishart, David;
Wanner, Barry L.

Publication type:

Article

Position of the fluorescent label is a crucial factor determining signal intensity in microarray hybridizations.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 395, doi. 10.1093/nar/gkj404

By:

Zhang, Lei;
Hurek, Thomas;
Reinhold-Hurek, Barbara

Publication type:

Article

Ddx42p—a human DEAD box protein with RNA chaperone activities.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 10, doi. 10.1093/nar/gkj403

By:

Uhlmann-Schiffler, Heike;
Jalal, Carolin;
Stahl, Hans

Publication type:

Article

Hypoxic stress suppresses RNA polymerase III recruitment and tRNA gene transcription in cardiomyocytes.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 286, doi. 10.1093/nar/gkj402

By:

Ernens, Isabelle;
Goodfellow, Sarah J.;
Innes, Fiona;
Kenneth, Niall S.;
Derblay, Louise E.;
White, Robert J.;
Scott, Pamela H.

Publication type:

Article

Oct-2 DNA binding transcription factor: functional consequences of phosphorylation and glycosylation.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 175, doi. 10.1093/nar/gkj401

By:

Ahmad, Ishtiaq;
Hoessli, Daniel C.;
Walker-Nasir, Evelyne;
Rafik, Saleem M.;
Shakoori, Abdul R.;
Nasir-ud-Din

Publication type:

Article

TACC3 mediates the association of MBD2 with histone acetyltransferases and relieves transcriptional repression of methylated promoters.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 1, p. 364, doi. 10.1093/nar/gkj400

By:

Angrisano, Tiziana;
Lembo, Francesca;
Pero, Raffaela;
Natale, Francesco;
Fusco, Alfredo;
Avvedimento, Vittorio E.;
Bruni, Carmelo B.;
Chiariotti, Lorenzo

Publication type:

Article