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Bias-minimized quantification of microRNA reveals widespread alternative processing and 3′ end modification.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2630, doi. 10.1093/nar/gky1293
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core genome m5 C methyltransferase JHP1050 (M.Hpy99III) plays an important role in orchestrating gene expression in Helicobacter pylori.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2336, doi. 10.1093/nar/gky1307
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conserved XPF:ERCC1-like Zip2:Spo16 complex controls meiotic crossover formation through structure-specific DNA binding.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2365, doi. 10.1093/nar/gky1273
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Codon stabilization coefficient as a metric to gain insights into mRNA stability and codon bias and their relationships with translation.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2216, doi. 10.1093/nar/gkz033
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C3P3-G1: first generation of a eukaryotic artificial cytoplasmic expression system.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2681, doi. 10.1093/nar/gkz069
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y-ome defines the 35% of Escherichia coli genes that lack experimental evidence of function.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2446, doi. 10.1093/nar/gkz030
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Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2641, doi. 10.1093/nar/gky1269
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Tudor protein Veneno assembles the ping-pong amplification complex that produces viral piRNAs in Aedes mosquitoes.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2546, doi. 10.1093/nar/gky1266
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Transfer RNA demethylase ALKBH3 promotes cancer progression via induction of tRNA-derived small RNAs.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2533, doi. 10.1093/nar/gky1250
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TDP-43 regulates site-specific 2′- O -methylation of U1 and U2 snRNAs via controlling the Cajal body localization of a subset of C/D scaRNAs.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2487, doi. 10.1093/nar/gkz086
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R-loop formation by dCas9 is mutagenic in Saccharomyces cerevisiae.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2389, doi. 10.1093/nar/gky1278
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Systematic investigation of sequence requirements for DNA i-motif formation.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2177, doi. 10.1093/nar/gkz046
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SQuIRE reveals locus-specific regulation of interspersed repeat expression.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. e27, doi. 10.1093/nar/gky1301
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Small nucleolar RNAs controlling rRNA processing in Trypanosoma brucei.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2609, doi. 10.1093/nar/gky1287
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Short tandem repeat stutter model inferred from direct measurement of in vitro stutter noise.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2436, doi. 10.1093/nar/gky1318
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beRBP: binding estimation for human RNA-binding proteins.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. e26, doi. 10.1093/nar/gky1294
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structure of the SAM/SAH-binding riboswitch.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2654, doi. 10.1093/nar/gky1283
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Selection of self-priming molecular replicators.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2169, doi. 10.1093/nar/gkz044
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role of SLX4 and its associated nucleases in DNA interstrand crosslink repair.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2377, doi. 10.1093/nar/gky1276
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RNase H sequence preferences influence antisense oligonucleotide efficiency.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2701, doi. 10.1093/nar/gkz065
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RNA element discovery from germ cell to blastocyst.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2263, doi. 10.1093/nar/gky1223
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Selective recognition of c-MYC Pu22 G-quadruplex by a fluorescent probe.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2190, doi. 10.1093/nar/gkz059
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Regulation of Rep helicase unwinding by an auto-inhibitory subdomain.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2523, doi. 10.1093/nar/gkz023
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Quantitative disclosure of DNA knot chirality by high-resolution 2D-gel electrophoresis.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. e29, doi. 10.1093/nar/gkz015
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Optimization of ribosome profiling using low-input brain tissue from fragile X syndrome model mice.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. e25, doi. 10.1093/nar/gky1292
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network of eIF2β interactions with eIF1 and Met-tRNA i promotes accurate start codon selection by the translation preinitiation complex.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2574, doi. 10.1093/nar/gky1274
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Bayesian inference of origin firing time distributions, origin interference and licencing probabilities from Next Generation Sequencing data.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2229, doi. 10.1093/nar/gkz094
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Mitochondrial membrane-based initial separation of MIWI and MILI functions during pachytene piRNA biogenesis.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2594, doi. 10.1093/nar/gky1281
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MiRNA-891a-5p mediates HIV-1 Tat and KSHV Orf-K1 synergistic induction of angiogenesis by activating NF-κB signaling.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2700, doi. 10.1093/nar/gkz088
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ME-Class2 reveals context dependent regulatory roles for 5-hydroxymethylcytosine.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. e28, doi. 10.1093/nar/gkz001
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Matching tRNA modifications in humans to their known and predicted enzymes.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2143, doi. 10.1093/nar/gkz011
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Loss of RNA-binding protein GRSF1 activates mTOR to elicit a proinflammatory transcriptional program.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2472, doi. 10.1093/nar/gkz082
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LncBook: a curated knowledgebase of human long non-coding RNAs.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2699, doi. 10.1093/nar/gkz073
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LIM protein Ajuba recruits DBC1 and CBP/p300 to acetylate ERα and enhances ERα target gene expression in breast cancer cells.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2322, doi. 10.1093/nar/gky1306
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Kinetic analysis of N -alkylaryl carboxamide hexitol nucleotides as substrates for evolved polymerases.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2160, doi. 10.1093/nar/gkz008
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Isolation and genome-wide characterization of cellular DNA:RNA triplex structures.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2306, doi. 10.1093/nar/gky1305
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Intracellular selection of trans -cleaving hammerhead ribozymes.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2514, doi. 10.1093/nar/gkz018
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Dysregulation of the cohesin subunit RAD21 by Hepatitis C virus mediates host–virus interactions.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2455, doi. 10.1093/nar/gkz052
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Amino acid based de Bruijn graph algorithm for identifying complete coding genes from metagenomic and metatranscriptomic short reads.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. e30, doi. 10.1093/nar/gkz017
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Identification of microRNA clusters cooperatively acting on epithelial to mesenchymal transition in triple negative breast cancer.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2205, doi. 10.1093/nar/gkz016
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H-NS uses an autoinhibitory conformational switch for environment-controlled gene silencing.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2666, doi. 10.1093/nar/gky1299
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Histone demethylase KDM3A is required for enhancer activation of hippo target genes in colorectal cancer.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2349, doi. 10.1093/nar/gky1317
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Engagement of DNA and H3K27me3 by the CBX8 chromodomain drives chromatin association.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2289, doi. 10.1093/nar/gky1290
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Insight into novel RNA-binding activities via large-scale analysis of lncRNA-bound proteome and IDH1-bound transcriptome.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2244, doi. 10.1093/nar/gkz032
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Drosophila Sister-of-Sex-lethal reinforces a male-specific gene expression pattern by controlling Sex-lethal alternative splicing.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2276, doi. 10.1093/nar/gky1284
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DNA polymerase η contributes to genome-wide lagging strand synthesis.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2425, doi. 10.1093/nar/gky1291
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DNA Ligase 1 is an essential mediator of sister chromatid telomere fusions in G2 cell cycle phase.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2402, doi. 10.1093/nar/gky1279
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Determining the effects of DNA sequence on Hel308 helicase translocation along single-stranded DNA using nanopore tweezers.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2506, doi. 10.1093/nar/gkz004
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Alternative 3′ UTRs direct localization of functionally diverse protein isoforms in neuronal compartments.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2560, doi. 10.1093/nar/gky1270
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