Works matching IS 03051048 AND DT 2013 AND VI 41 AND IP 21

Results: 41

Proteins that contain a functional Z-DNA-binding domain localize to cytoplasmic stress granules.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9786, doi. 10.1093/nar/gkt750

By:

Ng, Siew Kit;
Weissbach, Rebekka;
Ronson, George E.;
Scadden, A. D. J.

Publication type:

Article

Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9924, doi. 10.1093/nar/gkt743

By:

de Rosa, Matteo;
Zacarias, Sonia;
Athanasiadis, Alekos

Publication type:

Article

A winged helix domain in human MUS81 binds DNA and modulates the endonuclease activity of MUS81 complexes.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9741, doi. 10.1093/nar/gkt760

By:

Fadden, Andrew J.;
Schalbetter, Stephanie;
Bowles, Maureen;
Harris, Richard;
Lally, John;
Carr, Antony M.;
McDonald, Neil Q.

Publication type:

Article

Wellington: a novel method for the accurate identification of digital genomic footprints from DNase-seq data.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. e201, doi. 10.1093/nar/gkt850

By:

Piper, Jason;
Elze, Markus C.;
Cauchy, Pierre;
Cockerill, Peter N.;
Bonifer, Constanze;
Ott, Sascha

Publication type:

Article

DAZAP1 regulates the splicing of Crem, Crisp2 and Pot1a transcripts.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9858, doi. 10.1093/nar/gkt746

By:

Chen, Hsiang-Ying;
Yu, Yueh-Hsiang;
Yen, Pauline H.

Publication type:

Article

DEXUS: identifying differential expression in RNA-Seq studies with unknown conditions.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. e198, doi. 10.1093/nar/gkt834

By:

Klambauer, Günter;
Unterthiner, Thomas;
Hochreiter, Sepp

Publication type:

Article

Homology-mediated end-capping as a primary step of sister chromatid fusion in the breakage-fusion-bridge cycles.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9732, doi. 10.1093/nar/gkt762

By:

Marotta, Michael;
Chen, Xiongfong;
Watanabe, Takaaki;
Faber, Pieter W.;
Diede, Scott J.;
Tapscott, Stephen;
Tubbs, Raymond;
Kondratova, Anna;
Stephens, Robert;
Tanaka, Hisashi

Publication type:

Article

Directed evolution of the TALE N-terminal domain for recognition of all 5′ bases.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9779, doi. 10.1093/nar/gkt754

By:

Lamb, Brian M.;
Mercer, Andrew C.;
Barbas, Carlos F.

Publication type:

Article

Conformational transitions in human translin enable nucleic acid binding.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9956, doi. 10.1093/nar/gkt765

By:

Pérez-Cano, Laura;
Eliahoo, Elad;
Lasker, Keren;
Wolfson, Haim J.;
Glaser, Fabian;
Manor, Haim;
Bernadó, Pau;
Fernández-Recio, Juan

Publication type:

Article

One antitoxin—two functions: SR4 controls toxin mRNA decay and translation.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9870, doi. 10.1093/nar/gkt735

By:

Jahn, Natalie;
Brantl, Sabine

Publication type:

Article

Both mature miR-17-5p and passenger strand miR-17-3p target TIMP3 and induce prostate tumor growth and invasion.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9688, doi. 10.1093/nar/gkt680

By:

Yang, Xiangling;
Du, William W.;
Li, Haoran;
Liu, Fengqiong;
Khorshidi, Anna;
Rutnam, Zina Jeyapalan;
Yang, Burton B.

Publication type:

Article

Structural insight into LexA–RecA* interaction.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9901

By:

Kovačič, Lidija;
Paulič, Nejc;
Leonardi, Adrijana;
Hodnik, Vesna;
Anderluh, Gregor;
Podlesek, Zdravko;
Žgur-Bertok, Darja;
Križaj, Igor;
Butala, Matej

Publication type:

Article

A modular framework for gene set analysis integrating multilevel omics data.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9622, doi. 10.1093/nar/gkt752

By:

Sass, Steffen;
Buettner, Florian;
Mueller, Nikola S.;
Theis, Fabian J.

Publication type:

Article

Identifying subgroup markers in heterogeneous populations.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. e200, doi. 10.1093/nar/gkt845

By:

de Ronde, Jorma J.;
Rigaill, Guillem;
Rottenberg, Sven;
Rodenhuis, Sjoerd;
Wessels, Lodewyk F. A.

Publication type:

Article

miR-146a-5p circuitry uncouples cell proliferation and migration, but not differentiation, in human mesenchymal stem cells.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9753, doi. 10.1093/nar/gkt666

By:

Hsieh, Jui-Yu;
Huang, Tse-Shun;
Cheng, Shu-Meng;
Lin, Wei-Shiang;
Tsai, Tsung-Neng;
Lee, Oscar K.;
Wang, Hsei-Wei

Publication type:

Article

A quality control system for profiles obtained by ChIP sequencing.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. e196, doi. 10.1093/nar/gkt829

By:

Mendoza-Parra, Marco-Antonio;
Van Gool, Wouter;
Mohamed Saleem, Mohamed Ashick;
Ceschin, Danilo Guillermo;
Gronemeyer, Hinrich

Publication type:

Article

Two- and three-input TALE-based AND logic computation in embryonic stem cells.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9967, doi. 10.1093/nar/gkt758

By:

Lienert, Florian;
Torella, Joseph P.;
Chen, Jan-Hung;
Norsworthy, Michael;
Richardson, Ryan R.;
Silver, Pamela A.

Publication type:

Article

Robust RNAi enhancement via human Argonaute-2 overexpression from plasmids, viral vectors and cell lines.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. e199, doi. 10.1093/nar/gkt836

By:

Börner, Kathleen;
Niopek, Dominik;
Cotugno, Gabriella;
Kaldenbach, Michaela;
Pankert, Teresa;
Willemsen, Joschka;
Zhang, Xian;
Schürmann, Nina;
Mockenhaupt, Stefan;
Serva, Andrius;
Hiet, Marie-Sophie;
Wiedtke, Ellen;
Castoldi, Mirco;
Starkuviene, Vytaute;
Erfle, Holger;
Gilbert, Daniel F.;
Bartenschlager, Ralf;
Boutros, Michael;
Binder, Marco;
Streetz, Konrad

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2013, v. 41, n. 21, p. iii, doi. 10.1093/nar/gks1427
Publication type:: Article

Increasing cleavage specificity and activity of restriction endonuclease KpnI.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9812, doi. 10.1093/nar/gkt734

By:

Vasu, Kommireddy;
Nagamalleswari, Easa;
Zahran, Mai;
Imhof, Petra;
Xu, Shuang-yong;
Zhu, Zhenyu;
Chan, Siu-Hong;
Nagaraja, Valakunja

Publication type:

Article

Euler buckling and nonlinear kinking of double-stranded DNA.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9881, doi. 10.1093/nar/gkt739

By:

Fields, Alexander P.;
Meyer, Elisabeth A.;
Cohen, Adam E.

Publication type:

Article

Elucidating the evolutionary conserved DNA-binding specificities of WRKY transcription factors by molecular dynamics and in vitro binding assays.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9764, doi. 10.1093/nar/gkt732

By:

Brand, Luise H.;
Fischer, Nina M.;
Harter, Klaus;
Kohlbacher, Oliver;
Wanke, Dierk

Publication type:

Article

Rational design of antisense oligonucleotides targeting single nucleotide polymorphisms for potent and allele selective suppression of mutant Huntingtin in the CNS.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9634

By:

Østergaard, Michael E.;
Southwell, Amber L.;
Kordasiewicz, Holly;
Watt, Andrew T.;
Skotte, Niels H.;
Doty, Crystal N.;
Vaid, Kuljeet;
Villanueva, Erika B.;
Swayze, Eric E.;
Frank Bennett, C.;
Hayden, Michael R.;
Seth, Punit P.

Publication type:

Article

Wobble decoding by the Escherichia coli selenocysteine insertion machinery.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9800

By:

Xu, Jianqiang;
Croitoru, Victor;
Rutishauser, Dorothea;
Cheng, Qing;
Arnér, Elias S.J.

Publication type:

Article

Structure of an ‘open’ clamp type II topoisomerase-DNA complex provides a mechanism for DNA capture and transport.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9911, doi. 10.1093/nar/gkt749

By:

Laponogov, Ivan;
Veselkov, Dennis A.;
Crevel, Isabelle M.-T.;
Pan, Xiao-Su;
Fisher, L. Mark;
Sanderson, Mark R.

Publication type:

Article

Crystal structure of the DdrB/ssDNA complex from Deinococcus radiodurans reveals a DNA binding surface involving higher-order oligomeric states.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9934, doi. 10.1093/nar/gkt759

By:

Sugiman-Marangos, Seiji N.;
Peel, John K.;
Weiss, Yoni M.;
Ghirlando, Rodolfo;
Junop, Murray S.

Publication type:

Article

Crystal structure of RuvC resolvase in complex with Holliday junction substrate.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9945

By:

Górecka, Karolina M.;
Komorowska, Weronika;
Nowotny, Marcin

Publication type:

Article

H1 histones: current perspectives and challenges.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9593, doi. 10.1093/nar/gkt700

By:

Harshman, Sean W.;
Young, Nicolas L.;
Parthun, Mark R.;
Freitas, Michael A.

Publication type:

Article

Negative regulation of mitochondrial transcription by mitochondrial topoisomerase I.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9848, doi. 10.1093/nar/gkt768

By:

Sobek, Stefan;
Dalla Rosa, Ilaria;
Pommier, Yves;
Bornholz, Beatrice;
Kalfalah, Faiza;
Zhang, Hongliang;
Wiesner, Rudolf J.;
von Kleist-Retzow, Jürgen-Christoph;
Hillebrand, Frank;
Schaal, Heiner;
Mielke, Christian;
Christensen, Morten O.;
Boege, Fritz

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2013, v. 41, n. 21, p. i, doi. 10.1093/nar/gks1366
Publication type:: Article

Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9891, doi. 10.1093/nar/gkt738

By:

Renciuk, Daniel;
Blacque, Olivier;
Vorlickova, Michaela;
Spingler, Bernhard

Publication type:

Article

Aminoacylation and translational quality control strategy employed by leucyl-tRNA synthetase from a human pathogen with genetic code ambiguity.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9825, doi. 10.1093/nar/gkt741

By:

Zhou, Xiao-Long;
Fang, Zhi-Peng;
Ruan, Zhi-Rong;
Wang, Meng;
Liu, Ru-Juan;
Tan, Min;
Anella, Fabrizio Maria;
Wang, En-Duo

Publication type:

Article

Mediator is an intrinsic component of the basal RNA polymerase II machinery in vivo.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9651, doi. 10.1093/nar/gkt701

By:

Lacombe, Thierry;
Poh, Siew Lay;
Barbey, Régine;
Kuras, Laurent

Publication type:

Article

Competitive superhelical transitions involving cruciform extrusion.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9610, doi. 10.1093/nar/gkt733

By:

Zhabinskaya, Dina;
Benham, Craig J.

Publication type:

Article

Nucleic Acids Research - Editorial Board.

Published in:: Nucleic Acids Research, 2013, v. 41, n. 21, p. ii, doi. 10.1093/nar/gks1403
Publication type:: Article

A general approach for discriminative de novo motif discovery from high-throughput data.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. e197, doi. 10.1093/nar/gkt831

By:

Grau, Jan;
Posch, Stefan;
Grosse, Ivo;
Keilwagen, Jens

Publication type:

Article

Replisome stall events have shaped the distribution of replication origins in the genomes of yeasts.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9705, doi. 10.1093/nar/gkt728

By:

Newman, Timothy J.;
Mamun, Mohammed A.;
Nieduszynski, Conrad A.;
Blow, J. Julian

Publication type:

Article

A novel factor Iss10 regulates Mmi1-mediated selective elimination of meiotic transcripts.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9680, doi. 10.1093/nar/gkt763

By:

Yamashita, Akira;
Takayama, Tomomi;
Iwata, Ryo;
Yamamoto, Masayuki

Publication type:

Article

Observation of unpaired substrate DNA in the flap endonuclease-1 active site.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9839, doi. 10.1093/nar/gkt737

By:

David Finger, L.;
Patel, Nikesh;
Beddows, Amanda;
Ma, Long;
Exell, Jack C.;
Jardine, Emma;
Jones, Anita C.;
Grasby, Jane A.

Publication type:

Article

Opposing roles for 53BP1 during homologous recombination.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9719, doi. 10.1093/nar/gkt729

By:

Kakarougkas, Andreas;
Ismail, Amani;
Klement, Karolin;
Goodarzi, Aaron A.;
Conrad, Sandro;
Freire, Raimundo;
Shibata, Atsushi;
Lobrich, Markus;
Jeggo, Penny A.

Publication type:

Article

A signature motif mediating selective interactions of BCL11A with the NR2E/F subfamily of orphan nuclear receptors.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 21, p. 9663, doi. 10.1093/nar/gkt761

By:

Chan, Chun Ming;
Fulton, Joel;
Montiel-Duarte, Cristina;
Collins, Hilary M.;
Bharti, Neetu;
Wadelin, Frances R.;
Moran, Paula M.;
Mongan, Nigel P.;
Heery, David M.

Publication type:

Article