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OASIS: an automated program for global investigation of bacterial and archaeal insertion sequences.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. e174, doi. 10.1093/nar/gks778
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- Article
DNA catenation maintains structure of human metaphase chromosomes.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11428, doi. 10.1093/nar/gks931
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miRmap: Comprehensive prediction of microRNA target repression strength.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11673, doi. 10.1093/nar/gks901
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Editorial: NAR Awards 2012.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11173, doi. 10.1093/nar/gks1317
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- Article
A SUMO-interacting motif activates budding yeast ubiquitin ligase Rad18 towards SUMO-modified PCNA.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11380, doi. 10.1093/nar/gks892
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- Article
Nucleic Acids Research - Editorial Board.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. ii, doi. 10.1093/nar/gks084
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- Article
A four-subunit DNA polymerase ζ complex containing Pol δ accessory subunits is essential for PCNA-mediated mutagenesis.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11618, doi. 10.1093/nar/gks948
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- Article
Suppression and recovery of BRCA1-mediated transcription by HP1γ via modulation of promoter occupancy.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11321, doi. 10.1093/nar/gks947
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- Article
Self-organization of domain structures by DNA-loop-extruding enzymes.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11202, doi. 10.1093/nar/gks925
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The folding of the hepatitis C virus internal ribosome entry site depends on the 3′-end of the viral genome.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11697, doi. 10.1093/nar/gks927
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- Article
Nucleic Acids Research.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. i, doi. 10.1093/nar/gks106
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- Article
Pr is a member of a restricted class of σ70-dependent promoters that lack a recognizable −10 element.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11308, doi. 10.1093/nar/gks934
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Compression of next-generation sequencing reads aided by highly efficient de novo assembly.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. e171, doi. 10.1093/nar/gks754
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Hundreds of conserved non-coding genomic regions are independently lost in mammals.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11463, doi. 10.1093/nar/gks905
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- Article
Telomere length homeostasis and telomere position effect on a linear human artificial chromosome are dictated by the genetic background.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11477, doi. 10.1093/nar/gks926
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Subscriptions.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. iii, doi. 10.1093/nar/gks128
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- Article
Evolutionary transitions to new DNA methyltransferases through target site expansion and shrinkage.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11627, doi. 10.1093/nar/gks944
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A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11339, doi. 10.1093/nar/gks957
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AIRE-PHD fingers are structural hubs to maintain the integrity of chromatin-associated interactome.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11756, doi. 10.1093/nar/gks933
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- Article
Binding of hairpin pyrrole and imidazole polyamides to DNA: relationship between torsion angle and association rate constants.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11510, doi. 10.1093/nar/gks897
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Antisense morpholino targeting just upstream from a poly(A) tail junction of maternal mRNA removes the tail and inhibits translation.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. e173, doi. 10.1093/nar/gks765
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Pmt1, a Dnmt2 homolog in Schizosaccharomyces pombe, mediates tRNA methylation in response to nutrient signaling.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11648, doi. 10.1093/nar/gks956
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Sequence-specific cleavage of the RNA strand in DNA–RNA hybrids by the fusion of ribonuclease H with a zinc finger.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11563, doi. 10.1093/nar/gks885
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A minimal i-motif stabilized by minor groove G:T:G:T tetrads.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11737, doi. 10.1093/nar/gks911
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Article Withdrawn: GNARE: A Grid-based Server for the Analysis of User Submitted Genomes.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. e177, doi. 10.1093/nar/gkm366
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HRP2 determines the efficiency and specificity of HIV-1 integration in LEDGF/p75 knockout cells but does not contribute to the antiviral activity of a potent LEDGF/p75-binding site integrase inhibitor.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11518, doi. 10.1093/nar/gks913
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RNA-binding protein AUF1 represses Dicer expression.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11531, doi. 10.1093/nar/gks930
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Phosphorylation of PNKP by ATM prevents its proteasomal degradation and enhances resistance to oxidative stress.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11404, doi. 10.1093/nar/gks909
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Defining the functional footprint for recognition and repair of deaminated DNA.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11638, doi. 10.1093/nar/gks952
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Targeted manipulation of heterochromatin rescues MeCP2 Rett mutants and re-establishes higher order chromatin organization.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. e176, doi. 10.1093/nar/gks784
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Manipulating replisome dynamics to enhance lambda Red-mediated multiplex genome engineering.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. e170, doi. 10.1093/nar/gks751
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LtmA, a novel cyclic di-GMP-responsive activator, broadly regulates the expression of lipid transport and metabolism genes in Mycobacterium smegmatis.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11292, doi. 10.1093/nar/gks923
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Selection is more intelligent than design: improving the affinity of a bivalent ligand through directed evolution.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11777, doi. 10.1093/nar/gks899
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Mre11 ATLD17/18 mutation retains Tel1/ATM activity but blocks DNA double-strand break repair.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11435, doi. 10.1093/nar/gks954
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Distinct contributions of MSL complex subunits to the transcriptional enhancement responsible for dosage compensation in Drosophila.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11281, doi. 10.1093/nar/gks890
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Probing Rad51-DNA interactions by changing DNA twist.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11769, doi. 10.1093/nar/gks1131
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SPOC1 modulates DNA repair by regulating key determinants of chromatin compaction and DNA damage response.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11363, doi. 10.1093/nar/gks868
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Mechanism of allele-selective inhibition of huntingtin expression by duplex RNAs that target CAG repeats: function through the RNAi pathway.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11270, doi. 10.1093/nar/gks907
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Regulation of human Dicer by the resident ER membrane protein CLIMP-63.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11603
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The extent of sequence complementarity correlates with the potency of cellular miRNA-mediated restriction of HIV-1.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11684, doi. 10.1093/nar/gks912
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CAF-1-induced oligomerization of histones H3/H4 and mutually exclusive interactions with Asf1 guide H3/H4 transitions among histone chaperones and DNA.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11229, doi. 10.1093/nar/gks906
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Evaluation of single CpG sites as proxies of CpG island methylation states at the genome scale.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11490, doi. 10.1093/nar/gks928
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DNA-binding determinants promoting NHEJ by human Polµ.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11389, doi. 10.1093/nar/gks896
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Genome-wide analysis of FoxO1 binding in hepatic chromatin: Potential involvement of FoxO1 in linking retinoid signaling to hepatic gluconeogenesis.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11499, doi. 10.1093/nar/gks932
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Mek1 stabilizes Hop1-Thr318 phosphorylation to promote interhomolog recombination and checkpoint responses during yeast meiosis.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11416, doi. 10.1093/nar/gks920
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The C-terminus of Dpb2 is required for interaction with Pol2 and for cell viability.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11545, doi. 10.1093/nar/gks880
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Improved predictions of transcription factor binding sites using physicochemical features of DNA.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. e175, doi. 10.1093/nar/gks771
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Engineering the DNA cytosine-5 methyltransferase reaction for sequence-specific labeling of DNA.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11594
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Demethylation initiated by ROS1 glycosylase involves random sliding along DNA.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11554, doi. 10.1093/nar/gks894
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Transcription in the maintenance of centromere chromatin identity.
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- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11178, doi. 10.1093/nar/gks921
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