Works matching IS 03051048 AND DT 2012 AND VI 40 AND IP 5

Results: 48

Pseudouridine synthase 1: a site-specific synthase without strict sequence recognition requirements.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2107, doi. 10.1093/nar/gkr1017

By:

Sibert, Bryan S.;
Patton, Jeffrey R.

Publication type:

Article

Interplay between HIV-1 infection and host microRNAs.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2181, doi. 10.1093/nar/gkr961

By:

Sun, Guihua;
Li, Haitang;
Wu, Xiwei;
Covarrubias, Maricela;
Scherer, Lisa;
Meinking, Keith;
Luk, Brian;
Chomchan, Pritsana;
Alluin, Jessica;
Gombart, Adrian F.;
Rossi, John J.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 5, p. i, doi. 10.1093/nar/gks109
Publication type:: Article

LSD1 cooperates with CTIP2 to promote HIV-1 transcriptional silencing.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1904, doi. 10.1093/nar/gkr857

By:

Le Douce, Valentin;
Colin, Laurence;
Redel, Laetitia;
Cherrier, Thomas;
Herbein, Georges;
Aunis, Dominique;
Rohr, Olivier;
Van Lint, Carine;
Schwartz, Christian

Publication type:

Article

RNA aptamers that functionally interact with green fluorescent protein and its derivatives.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e39, doi. 10.1093/nar/gkr1264

By:

Shui, Bo;
Ozer, Abdullah;
Zipfel, Warren;
Sahu, Nevedita;
Singh, Avtar;
Lis, John T.;
Shi, Hua;
Kotlikoff, Michael I.

Publication type:

Article

Cleavage mediated by the P15 domain of bacterial RNase P RNA.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2224, doi. 10.1093/nar/gkr1001

By:

Kikovska, Ema;
Wu, Shiying;
Mao, Guanzhong;
Kirsebom, Leif A.

Publication type:

Article

Attenuation of loop-receptor interactions with pseudoknot formation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2168, doi. 10.1093/nar/gkr926

By:

Afonin, Kirill A.;
Lin, Yen-Ping;
Calkins, Erin R.;
Jaeger, Luc

Publication type:

Article

Unsupervised discovery of microbial population structure within metagenomes using nucleotide base composition.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e34, doi. 10.1093/nar/gkr1204

By:

Saeed, Isaam;
Tang, Sen-Lin;
Halgamuge, Saman K.

Publication type:

Article

Self-assembled nucleolipids: from supramolecular structure to soft nucleic acid and drug delivery devices.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1891, doi. 10.1093/nar/gkr681

By:

Allain, Vanessa;
Bourgaux, Claudie;
Couvreur, Patrick

Publication type:

Article

AP endonuclease independent repair of abasic sites in Schizosaccharomyces pombe.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2000, doi. 10.1093/nar/gkr933

By:

Nilsen, Line;
Forstrøm, Rune J.;
Bjørås, Magnar;
Alseth, Ingrun

Publication type:

Article

Nonspaced inverted DNA repeats are preferential targets for homology-directed gene repair in mammalian cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1984, doi. 10.1093/nar/gkr976

By:

Holkers, Maarten;
de Vries, Antoine A. F.;
Gonçalves, Manuel A. F. V.

Publication type:

Article

Do replication forks control late origin firing in Saccharomyces cerevisiae?

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2010, doi. 10.1093/nar/gkr982

By:

Ma, Emilie;
Hyrien, Olivier;
Goldar, Arach

Publication type:

Article

A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2271, doi. 10.1093/nar/gkr906

By:

Whelan, Fiona;
Stead, Jonathan A.;
Shkumatov, Alexander V.;
Svergun, Dmitri I.;
Sanders, Cyril M.;
Antson, Alfred A.

Publication type:

Article

Crucial elements that maintain the interactions between the regulatory TnaC peptide and the ribosome exit tunnel responsible for Trp inhibition of ribosome function.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2247

By:

Martínez, Allyson K.;
Shirole, Nitin H.;
Murakami, Shino;
Benedik, Michael J.;
Sachs, Matthew S.;
Cruz-Vera, Luis R.

Publication type:

Article

The 19S proteasome subcomplex promotes the targeting of NuA4 HAT to the promoters of ribosomal protein genes to facilitate the recruitment of TFIID for transcriptional initiation in vivo.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1969, doi. 10.1093/nar/gkr977

By:

Uprety, Bhawana;
Lahudkar, Shweta;
Malik, Shivani;
Bhaumik, Sukesh R.

Publication type:

Article

Enhancing the cellular uptake of Py–Im polyamides through next-generation aryl turns.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2345, doi. 10.1093/nar/gkr970

By:

Meier, Jordan L.;
Montgomery, David C.;
Dervan, Peter B.

Publication type:

Article

Crystal structure of the NurA–dAMP–Mn2+ complex.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2258, doi. 10.1093/nar/gkr999

By:

Chae, Jina;
Kim, Young Chang;
Cho, Yunje

Publication type:

Article

Helix-length compensation studies reveal the adaptability of the VS ribozyme architecture.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2284, doi. 10.1093/nar/gkr1018

By:

Lacroix-Labonté, Julie;
Girard, Nicolas;
Lemieux, Sébastien;
Legault, Pascale

Publication type:

Article

Bacterial ribosome requires multiple L12 dimers for efficient initiation and elongation of protein synthesis involving IF2 and EF-G.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2054, doi. 10.1093/nar/gkr1031

By:

Mandava, Chandra Sekhar;
Peisker, Kristin;
Ederth, Josefine;
Kumar, Ranjeet;
Ge, Xueliang;
Szaflarski, Witold;
Sanyal, Suparna

Publication type:

Article

A supramolecular assembly formed by influenza A virus genomic RNA segments.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2197, doi. 10.1093/nar/gkr985

By:

Fournier, Emilie;
Moules, Vincent;
Essere, Boris;
Paillart, Jean-Christophe;
Sirbat, Jean-Daniel;
Isel, Catherine;
Cavalier, Annie;
Rolland, Jean-Paul;
Thomas, Daniel;
Lina, Bruno;
Marquet, Roland

Publication type:

Article

Structural analysis of an eIF3 subcomplex reveals conserved interactions required for a stable and proper translation pre-initiation complex assembly.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2294

By:

Herrmannová, Anna;
Daujotytė, Dalia;
Yang, Ji-Chun;
Cuchalová, Lucie;
Gorrec, Fabrice;
Wagner, Susan;
Dányi, István;
Lukavsky, Peter J.;
Shivaya Valášek, Leoš

Publication type:

Article

Maximizing signal-to-noise ratio in the random mutation capture assay.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e35, doi. 10.1093/nar/gkr1221

By:

Poovathingal, Suresh Kumar;
Gruber, Jan;
Ng, Li Fang;
Halliwell, Barry;
Gunawan, Rudiyanto

Publication type:

Article

Characterization of the kinetic and thermodynamic landscape of RNA folding using a novel application of isothermal titration calorimetry.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2140, doi. 10.1093/nar/gkr894

By:

Vander Meulen, Kirk A.;
Butcher, Samuel E.

Publication type:

Article

Functional and direct interaction between the RNA binding protein HuD and active Akt1.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1944, doi. 10.1093/nar/gkr979

By:

Fujiwara, Toshinobu;
Fukao, Akira;
Sasano, Yumi;
Matsuzaki, Hidenori;
Kikkawa, Ushio;
Imataka, Hiroaki;
Inoue, Kunio;
Endo, Shogo;
Sonenberg, Nahum;
Thoma, Christian;
Sakamoto, Hiroshi

Publication type:

Article

Novel non-specific DNA adenine methyltransferases.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2119, doi. 10.1093/nar/gkr1039

By:

Drozdz, Marek;
Piekarowicz, Andrzej;
Bujnicki, Janusz M.;
Radlinska, Monika

Publication type:

Article

Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2020, doi. 10.1093/nar/gkr904

By:

Schmidtke, Cornelius;
Findeiß, Sven;
Sharma, Cynthia M.;
Kuhfuß, Juliane;
Hoffmann, Steve;
Vogel, Jörg;
Stadler, Peter F.;
Bonas, Ulla

Publication type:

Article

Native gel electrophoresis of human telomerase distinguishes active complexes with or without dyskerin.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e36, doi. 10.1093/nar/gkr1243

By:

Gardano, Laura;
Holland, Linda;
Oulton, Rena;
Le Bihan, Thierry;
Harrington, Lea

Publication type:

Article

Development of a ‘clickable’ non-natural nucleotide to visualize the replication of non-instructional DNA lesions.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2357, doi. 10.1093/nar/gkr980

By:

Motea, Edward A.;
Lee, Irene;
Berdis, Anthony J.

Publication type:

Article

Specialization of an Exonuclease III family enzyme in the repair of 3′ DNA lesions during base excision repair in the human pathogen Neisseria meningitidis.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2065, doi. 10.1093/nar/gkr905

By:

Silhan, Jan;
Nagorska, Krzysztofa;
Zhao, Qiyuan;
Jensen, Kirsten;
Freemont, Paul S.;
Tang, Christoph M.;
Baldwin, Geoff S.

Publication type:

Article

Synthetic transactivation screening reveals ETV4 as broad coactivator of hypoxia-inducible factor signaling.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1928, doi. 10.1093/nar/gkr978

By:

Wollenick, Kristin;
Hu, Jun;
Kristiansen, Glen;
Schraml, Peter;
Rehrauer, Hubert;
Berchner-Pfannschmidt, Utta;
Fandrey, Joachim;
Wenger, Roland H.;
Stiehl, Daniel P.

Publication type:

Article

A role for insulator elements in the regulation of gene expression response to hypoxia.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1916, doi. 10.1093/nar/gkr842

By:

Tiana, Maria;
Villar, Diego;
Pérez-Guijarro, Eva;
Gómez-Maldonado, Laura;
Moltó, Eduardo;
Fernández-Miñán, Ana;
Gómez-Skarmeta, Jose Luis;
Montoliu, Lluís;
del Peso, Luis

Publication type:

Article

Pso2 (SNM1) is a DNA structure-specific endonuclease.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2131, doi. 10.1093/nar/gkr1059

By:

Tiefenbach, Tracy;
Junop, Murray

Publication type:

Article

Permanent or reversible conjugation of 2′-O- or 5′-O-aminooxymethylated nucleosides with functional groups as a convenient and efficient approach to the modification of RNA and DNA sequences.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2312, doi. 10.1093/nar/gkr896

By:

Cieślak, Jacek;
Grajkowski, Andrzej;
Ausín, Cristina;
Gapeev, Alexei;
Beaucage, Serge L.

Publication type:

Article

Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2041, doi. 10.1093/nar/gkr1042

By:

Duitama, Jorge;
McEwen, Gayle K.;
Huebsch, Thomas;
Palczewski, Stefanie;
Schulz, Sabrina;
Verstrepen, Kevin;
Suk, Eun-Kyung;
Hoehe, Margret R.

Publication type:

Article

Single-pot enzymatic synthesis of Dicer-substrate siRNAs.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e40, doi. 10.1093/nar/gkr1174

By:

Guiley, Keelan Z.;
Pratt, Ashley J.;
MacRae, Ian J.

Publication type:

Article

Pre-B cell to macrophage transdifferentiation without significant promoter DNA methylation changes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 1954

By:

Rodríguez-Ubreva, Javier;
Ciudad, Laura;
Gómez-Cabrero, David;
Parra, Maribel;
Bussmann, Lars H.;
di Tullio, Alessandro;
Kallin, Eric M.;
Tegnér, Jesper;
Graf, Thomas;
Ballestar, Esteban

Publication type:

Article

Solution structure and DNA-binding properties of the phosphoesterase domain of DNA ligase D.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2076, doi. 10.1093/nar/gkr950

By:

Natarajan, Aswin;
Dutta, Kaushik;
Temel, Deniz B.;
Nair, Pravin A.;
Shuman, Stewart;
Ghose, Ranajeet

Publication type:

Article

Nucleic Acids Research - Editorial Board.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 5, p. ii, doi. 10.1093/nar/gks087
Publication type:: Article

Fluorescence strategies for high-throughput quantification of protein interactions.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e33, doi. 10.1093/nar/gkr1045

By:

Hieb, Aaron R.;
D'Arcy, Sheena;
Kramer, Michael A.;
White, Alison E.;
Luger, Karolin

Publication type:

Article

Direct, genome-wide assessment of DNA mutations in single cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2032, doi. 10.1093/nar/gkr949

By:

Gundry, Michael;
Li, Wenge;
Maqbool, Shahina Bano;
Vijg, Jan

Publication type:

Article

Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e38, doi. 10.1093/nar/gkr1252

By:

Oh, Young Min;
Kim, Jong Kyoung;
Choi, Seungjin;
Yoo, Joo-Yeon

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 5, p. iii, doi. 10.1093/nar/gks131
Publication type:: Article

Chemical structure requirements and cellular targeting of microRNA-122 by peptide nucleic acids anti-miRs.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2152, doi. 10.1093/nar/gkr885

By:

Torres, Adrian G.;
Fabani, Martin M.;
Vigorito, Elena;
Williams, Donna;
Al-Obaidi, Naowras;
Wojciechowski, Filip;
Hudson, Robert H. E.;
Seitz, Oliver;
Gait, Michael J.

Publication type:

Article

Carrier-free cellular uptake and the gene-silencing activity of the lipophilic siRNAs is strongly affected by the length of the linker between siRNA and lipophilic group.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2330, doi. 10.1093/nar/gkr1002

By:

Petrova, Natalya S.;
Chernikov, Ivan V.;
Meschaninova, Mariya I.;
Dovydenko, IIya S.;
Venyaminova, Aliya G.;
Zenkova, Marina A.;
Vlassov, Valentin V.;
Chernolovskaya, Elena L.

Publication type:

Article

West Nile virus encodes a microRNA-like small RNA in the 3′ untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2210, doi. 10.1093/nar/gkr848

By:

Hussain, Mazhar;
Torres, Shessy;
Schnettler, Esther;
Funk, Anneke;
Grundhoff, Adam;
Pijlman, Gorben P.;
Khromykh, Alexander A.;
Asgari, Sassan

Publication type:

Article

The food additive vanillic acid controls transgene expression in mammalian cells and mice.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. e37, doi. 10.1093/nar/gkr1251

By:

Gitzinger, Marc;
Kemmer, Christian;
Fluri, David A.;
Daoud El-Baba, Marie;
Weber, Wilfried;
Fussenegger, Martin

Publication type:

Article

Biochemical studies of the Saccharomyces cerevisiae Mph1 helicase on junction-containing DNA structures.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2089, doi. 10.1093/nar/gkr983

By:

Kang, Young-Hoon;
Munashingha, Palinda Ruvan;
Lee, Chul-Hwan;
Nguyen, Tuan Anh;
Seo, Yeon-Soo

Publication type:

Article

Regulation of 6S RNA by pRNA synthesis is required for efficient recovery from stationary phase in E. coli and B. subtilis.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 5, p. 2234, doi. 10.1093/nar/gkr1003

By:

Cavanagh, Amy T.;
Sperger, Jamie M.;
Wassarman, Karen M.

Publication type:

Article