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EuPathDB: the eukaryotic pathogen genomics database resource.
Published in:
Nucleic Acids Research, 2017, v. 45, n. D1, p. D581, doi. 10.1093/nar/gkw1105
By:
- Aurrecoechea, Cristina;
- Barreto, Ana;
- Basenko, Evelina Y.;
- Brestelli, John;
- Brunk, Brian P.;
- Cade, Shon;
- Crouch, Kathryn;
- Doherty, Ryan;
- Falke, Dave;
- Fischer, Steve;
- Gajria, Bindu;
- Harb, Omar S.;
- Heiges, Mark;
- Hertz-Fowler, Christiane;
- Sufen Hu;
- Iodice, John;
- Kissinger, Jessica C.;
- Lawrence, Cris;
- Wei Li;
- Pinney, Deborah F.
Publication type:
Article
EuPathDB: The Eukaryotic Pathogen database.
Published in:
Nucleic Acids Research, 2013, v. 41, p. D684, doi. 10.1093/nar/gks1113
By:
- Aurrecoechea, Cristina;
- Barreto, Ana;
- Brestelli, John;
- Brunk, Brian P.;
- Shon Cade;
- Doherty, Ryan;
- Fischer, Steve;
- Gajria, Bindu;
- Xin Gao;
- Gingle, Alan;
- Grant, Greg;
- Harb, Omar S.;
- Heiges, Mark;
- Sufen Hu;
- Iodice, John;
- Kissinger, Jessica C.;
- Kraemer, Eileen T.;
- Wei Li;
- Pinney, Deborah F.;
- Pitts, Brian
Publication type:
Article
FungiDB: an integrated functional genomics database for fungi.
Published in:
Nucleic Acids Research, 2012, p. D675, doi. 10.1093/nar/gkr918
By:
- Stajich, Jason E.;
- Harris, Todd;
- Brunk, Brian P.;
- Brestelli, John;
- Fischer, Steve;
- Harb, Omar S.;
- Kissinger, Jessica C.;
- Li, Wei;
- Nayak, Vishal;
- Pinney, Deborah F.;
- Stoeckert, Chris J.;
- Roos, David S.
Publication type:
Article
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species.
Published in:
Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D612, doi. 10.1093/nar/gkq1006
By:
- Aurrecoechea, Cristina;
- Barreto, Ana;
- Brestelli, John;
- Brunk, Brian P.;
- Caler, Elisabet V.;
- Fischer, Steve;
- Gajria, Bindu;
- Gao, Xin;
- Gingle, Alan;
- Grant, Greg;
- Harb, Omar S.;
- Heiges, Mark;
- Iodice, John;
- Kissinger, Jessica C.;
- Kraemer, Eileen T.;
- Li, Wei;
- Nayak, Vishal;
- Pennington, Cary;
- Pinney, Deborah F.;
- Pitts, Brian
Publication type:
Article
EuPathDB: a portal to eukaryotic pathogen databases.
Published in:
Nucleic Acids Research, 2010, v. 38, p. D415, doi. 10.1093/nar/gkp941
By:
- Aurrecoechea, Cristina;
- Brestelli, John;
- Brunk, Brian P.;
- Fischer, Steve;
- Gajria, Bindu;
- Xin Gao;
- Gingle, Alan;
- Grant, Greg;
- Harb, Omar S.;
- Heiges, Mark;
- Innamorato, Frank;
- Iodice, John;
- Kissinger, Jessica C.;
- Kraemer, Eileen T.;
- Wei Li;
- Miller, John A.;
- Nayak, Vishal;
- Pennington, Cary;
- Pinney, Deborah F.;
- Roos, David S.
Publication type:
Article
TriTrypDB: a functional genomic resource for the Trypanosomatidae.
Published in:
Nucleic Acids Research, 2010, v. 38, p. D457, doi. 10.1093/nar/gkp851
By:
- Aslett, Martin;
- Aurrecoechea, Cristina;
- Berriman, Matthew;
- Brestelli, John;
- Brunk, Brian P.;
- Carrington, Mark;
- Depledge, Daniel P.;
- Fischer, Steve;
- Gajria, Bindu;
- Xin Gao;
- Gardner, Malcolm J.;
- Gingle, Alan;
- Grant, Greg;
- Harb, Omar S.;
- Heiges, Mark;
- Hertz-Fowler, Christiane;
- Houston, Robin;
- Innamorato, Frank;
- Iodice, John;
- Kissinger, Jessica C.
Publication type:
Article
PlasmoDB: a functional genomic database for malaria parasites.
Published in:
Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D539, doi. 10.1093/nar/gkn814
By:
- Aurrecoechea, Cristina;
- Brestelli, John;
- Brunk, Brian P.;
- Dommer, Jennifer;
- Fischer, Steve;
- Gajria, Bindu;
- Gao, Xin;
- Gingle, Alan;
- Grant, Greg;
- Harb, Omar S.;
- Heiges, Mark;
- Innamorato, Frank;
- Iodice, John;
- Kissinger, Jessica C.;
- Kraemer, Eileen;
- Li, Wei;
- Miller, John A.;
- Nayak, Vishal;
- Pennington, Cary;
- Pinney, Deborah F.
Publication type:
Article
GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis.
Published in:
Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D526, doi. 10.1093/nar/gkn631
By:
- Aurrecoechea, Cristina;
- Brestelli, John;
- Brunk, Brian P.;
- Carlton, Jane M.;
- Dommer, Jennifer;
- Fischer, Steve;
- Gajria, Bindu;
- Gao, Xin;
- Gingle, Alan;
- Grant, Greg;
- Harb, Omar S.;
- Heiges, Mark;
- Innamorato, Frank;
- Iodice, John;
- Kissinger, Jessica C.;
- Kraemer, Eileen;
- Li, Wei;
- Miller, John A.;
- Morrison, Hilary G.;
- Nayak, Vishal
Publication type:
Article
Standardized Metadata for Human Pathogen/Vector Genomic Sequences.
Published in:
PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099979
By:
- Dugan, Vivien G.;
- Emrich, Scott J.;
- Giraldo-Calderón, Gloria I.;
- Harb, Omar S.;
- Newman, Ruchi M.;
- Pickett, Brett E.;
- Schriml, Lynn M.;
- Stockwell, Timothy B.;
- Stoeckert Jr, Christian J.;
- Sullivan, Dan E.;
- Singh, Indresh;
- Ward, Doyle V.;
- Yao, Alison;
- Zheng, Jie;
- Barrett, Tanya;
- Birren, Bruce;
- Brinkac, Lauren;
- Bruno, Vincent M.;
- Caler, Elizabet;
- Chapman, Sinéad
Publication type:
Article
Fosmidomycin Uptake into Plasmodium and Babesia-Infected Erythrocytes Is Facilitated by Parasite-Induced New Permeability Pathways.
Published in:
PLoS ONE, 2011, v. 6, n. 5, p. 1, doi. 10.1371/journal.pone.0019334
By:
- Baumeister, Stefan;
- Wiesner, Jochen;
- Reichenberg, Armin;
- Hintz, Martin;
- Bietz, Sven;
- Harb, Omar S.;
- Roos, David S.;
- Kordes, Maximilian;
- Friesen, Johannes;
- Matuschewski, Kai;
- Lingelbach, Klaus;
- Jomaa, Hassan;
- Seeber, Frank
Publication type:
Article
In Silico Identification of Specialized Secretory-Organelle Proteins in Apicomplexan Parasites and In Vivo Validation in Toxoplasma gondii.
Published in:
PLoS ONE, 2008, v. 3, n. 10, p. 1, doi. 10.1371/journal.pone.0003611
By:
- ZhongQiang Chen;
- Harb, Omar S.;
- Roos, David S.
Publication type:
Article
The strategies WDK: a graphical search interface and web development kit for functional genomics databases.
Published in:
Database: The Journal of Biological Databases & Curation, 2011, v. 2011, p. 1, doi. 10.1093/database/bar027
By:
- Fischer, Steve;
- Aurrecoechea, Cristina;
- Brunk, Brian P.;
- Xin Gao;
- Harb, Omar S.;
- Kraemer, Eileen T.;
- Pennington, Cary;
- Treatman, Charles;
- Kissinger, Jessica C.;
- Roos, David S.;
- Stoeckert, Christian J.
Publication type:
Article
Phenotypic modulation by intracellular bacterial pathogens.
Published in:
Electrophoresis, 1999, v. 20, n. 11, p. 2248, doi. 10.1002/(SICI)1522-2683(19990801)20:11<2248::AID-ELPS2248>3.0.CO;2-N
By:
- Abu Kwaik, Yousef;
- Harb, Omar S.
Publication type:
Article
Meeting Report: Fungal Genomics Meets Social Media: Highlights of the 28th Fungal Genetics Conference at Asilomar.
Published in:
2015
By:
- Momany, Michelle;
- Di Pietro, Antonio;
- Alexander, William G.;
- Barker, Bridget M.;
- Harb, Omar S.;
- Kamoun, Sophien;
- Martin, Francis;
- Pires, J. Chris;
- Stajich, Jason E.;
- Thomma, Bart P. H. J.;
- Unruh, Sarah
Publication type:
Proceeding
From protozoa to mammalian cells: a new paradigm in the life cycle of intracellular bacterial pathogens.
Published in:
Environmental Microbiology, 2000, v. 2, n. 3, p. 251, doi. 10.1046/j.1462-2920.2000.00112.x
By:
- Harb, Omar S.;
- Gao, Lian-Yong;
- Kwaik, Yousef Abu
Publication type:
Article
A Framework for Global Collaborative Data Management for Malaria Research.
Published in:
American Journal of Tropical Medicine & Hygiene, 2015, v. 93, p. 124, doi. 10.4269/ajtmh.15-0003
By:
- Gutierrez, Juan B.;
- Harb, Omar S.;
- Jie Zheng;
- Tisch, Daniel J.;
- Charlebois, Edwin D.;
- Stoeckert Jr., Christian J.;
- Sullivan, Steven A.
Publication type:
Article
Population Genetics, Evolutionary Genomics, and Genome-Wide Studies of Malaria: A View across the International Centers of Excellence for Malaria Research.
Published in:
American Journal of Tropical Medicine & Hygiene, 2015, v. 93, p. 87, doi. 10.4269/ajtmh.15-0049
By:
- Carlton, Jane M.;
- Volkman, Sarah K.;
- Uplekar, Swapna;
- Hupalo, Daniel N.;
- Alves, João Marcelo Pereira;
- Liwang Cui;
- Donnelly, Martin;
- Roos, David S.;
- Harb, Omar S.;
- Acosta, Monica;
- Read, Andrew;
- Ribolla, Paulo E. M.;
- Singh, Om P.;
- Valecha, Neena;
- Wassmer, Samuel C.;
- Ferreira, Marcelo;
- Escalante, Ananias A.
Publication type:
Article
What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species.
Published in:
Genetics, 2024, v. 227, n. 1, p. 1, doi. 10.1093/genetics/iyae035
By:
- Basenko, Evelina Y;
- Shanmugasundram, Achchuthan;
- Böhme, Ulrike;
- Starns, David;
- Wilkinson, Paul A;
- Davison, Helen R;
- Crouch, Kathryn;
- Maslen, Gareth;
- Harb, Omar S;
- Amos, Beatrice;
- McDowell, Mary Ann;
- Kissinger, Jessica C;
- Roos, David S;
- Jones, Andrew
Publication type:
Article
TriTrypDB: An integrated functional genomics resource for kinetoplastida.
Published in:
PLoS Neglected Tropical Diseases, 2023, v. 16, n. 1, p. 1, doi. 10.1371/journal.pntd.0011058
By:
- Shanmugasundram, Achchuthan;
- Starns, David;
- Böhme, Ulrike;
- Amos, Beatrice;
- Wilkinson, Paul A.;
- Harb, Omar S.;
- Warrenfeltz, Susanne;
- Kissinger, Jessica C.;
- McDowell, Mary Ann;
- Roos, David S.;
- Crouch, Kathryn;
- Jones, Andrew R.
Publication type:
Article

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