Works matching IS 03051048 AND DT 2010 AND VI 38 AND IP 3

Results: 40

A naturally occurring human RPA subunit homolog does not support DNA replication or cell-cycle progression.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 846, doi. 10.1093/nar/gkp1062

By:

Haring, Stuart J.;
Humphreys, Troy D.;
Wold, Marc S.

Publication type:

Article

Critical amino acids in human DNA polymerases η and κ involved in erroneous incorporation of oxidized nucleotides.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 859, doi. 10.1093/nar/gkp1095

By:

Katafuchi, Atsushi;
Sassa, Akira;
Niimi, Naoko;
Grúz, Petr;
Fujimoto, Hirofumi;
Masutani, Chikahide;
Hanaoka, Fumio;
Ohta, Toshihiro;
Nohmi, Takehiko

Publication type:

Article

Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 981, doi. 10.1093/nar/gkp1035

By:

Zeng, Changying;
Wang, Wenquan;
Zheng, Yun;
Chen, Xin;
Bo, Weiping;
Song, Shun;
Zhang, Weixiong;
Peng, Ming

Publication type:

Article

A single-molecule assay for telomerase structure-function analysis.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. e16, doi. 10.1093/nar/gkp1033

By:

Wu, John Y.;
Stone, Michael D.;
Zhuang, Xiaowei

Publication type:

Article

An internal ribosomal entry site mediates redox-sensitive translation of Nrf2.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 778, doi. 10.1093/nar/gkp1048

By:

Li, Wenge;
Thakor, Nehal;
Xu, Eugenia Y.;
Huang, Ying;
Chen, Chi;
Yu, Rong;
Holcik, Martin;
Kong, Ah-Ng

Publication type:

Article

Defining a role for Hfq in Gram-positive bacteria: evidence for Hfq-dependent antisense regulation in Listeria monocytogenes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 907, doi. 10.1093/nar/gkp1081

By:

Nielsen, Jesper Sejrup;
Lei, Lisbeth Kristensen;
Ebersbach, Tine;
Olsen, Anders Steno;
Klitgaard, Janne Kudsk;
Valentin-Hansen, Poul;
Kallipolitis, Birgitte Haahr

Publication type:

Article

Verification of specific G-quadruplex structure by using a novel cyanine dye supramolecular assembly: II. The binding characterization with specific intramolecular G-quadruplex and the recognizing mechanism.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 1022, doi. 10.1093/nar/gkp1045

By:

Yang, Qianfan;
Xiang, Junfeng;
Yang, Shu;
Li, Qian;
Zhou, Qiuju;
Guan, Aijiao;
Zhang, Xiufeng;
Zhang, Hong;
Tang, Yalin;
Xu, Guangzhi

Publication type:

Article

Correlated changes between regulatory cis elements and condition-specific expression in paralogous gene families.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 738, doi. 10.1093/nar/gkp989

By:

Singh, Larry N.;
Hannenhalli, Sridhar

Publication type:

Article

SIRT1 deacetylates APE1 and regulates cellular base excision repair.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 832, doi. 10.1093/nar/gkp1039

By:

Yamamori, Tohru;
DeRicco, Jeremy;
Naqvi, Asma;
Hoffman, Timothy A.;
Mattagajasingh, Ilwola;
Kasuno, Kenji;
Jung, Saet-Byel;
Kim, Cuk-Seong;
Irani, Kaikobad

Publication type:

Article

Sequence–structure relationships in RNA loops: establishing the basis for loop homology modeling.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 970, doi. 10.1093/nar/gkp1010

By:

Schudoma, Christian;
May, Patrick;
Nikiforova, Viktoria;
Walther, Dirk

Publication type:

Article

Reciprocal roles of SIRT1 and SKIP in the regulation of RAR activity: implication in the retinoic acid-induced neuronal differentiation of P19 cells.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 822, doi. 10.1093/nar/gkp1056

By:

Kang, Moo-Rim;
Lee, Sang-Wang;
Um, Elisa;
Kang, Hyun Tae;
Hwang, Eun Seong;
Kim, Eun-Joo;
Um, Soo-Jong

Publication type:

Article

A single-label phenylpyrrolocytidine provides a molecular beacon-like response reporting HIV-1 RT RNase H activity.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 1048, doi. 10.1093/nar/gkp1022

By:

Wahba, Alexander S.;
Esmaeili, Abbasali;
Damha, Masad J.;
Hudson, Robert H. E.

Publication type:

Article

Transcription regulation of caspase-1 by R393 of HIPPI and its molecular partner HIP-1.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 878, doi. 10.1093/nar/gkp1011

By:

Banerjee, M.;
Datta, M.;
Majumder, P.;
Mukhopadhyay, D.;
Bhattacharyya, N. P.

Publication type:

Article

Dna2 is a structure-specific nuclease, with affinity for 5′-flap intermediates.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 920, doi. 10.1093/nar/gkp1055

By:

Stewart, Jason A.;
Campbell, Judith L.;
Bambara, Robert A.

Publication type:

Article

Specific local induction of DNA strand breaks by infrared multi-photon absorption.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. e14

By:

Träutlein, D.;
Deibler, M.;
Leitenstorfer, A.;
Ferrando-May, E.

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 3, p. iii, doi. 10.1093/nar/gkq105
Publication type:: Article

GeMMA: functional subfamily classification within superfamilies of predicted protein structural domains.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 720, doi. 10.1093/nar/gkp1049

By:

Lee, David A.;
Rentzsch, Robert;
Orengo, Christine

Publication type:

Article

Extensive mis-splicing of a bi-partite plant mitochondrial group II intron.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 996, doi. 10.1093/nar/gkp994

By:

Elina, Helen;
Brown, Gregory G.

Publication type:

Article

Mechanistic differences in the transcriptional activation of p53 by 14-3-3 isoforms.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 893, doi. 10.1093/nar/gkp1041

By:

Rajagopalan, Sridharan;
Sade, Robert S.;
Townsley, Fiona M.;
Fersht, Alan R.

Publication type:

Article

jpHMM: improving the reliability of recombination prediction in HIV-1.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 1059, doi. 10.1093/nar/gkq015

By:

Schultz, Anne-Kathrin;
Zhang, Ming;
Bulla, Ingo;
Leitner, Thomas;
Korber, Bette;
Morgenstern, Burkhard;
Stanke, Mario

Publication type:

Article

Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 1009, doi. 10.1093/nar/gkp1029

By:

Zhang, Zhenjiang;
Dai, Jixun;
Veliath, Elizabeth;
Jones, Roger A.;
Yang, Danzhou

Publication type:

Article

Quantitative analysis of ribosome–mRNA complexes at different translation stages.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. e15, doi. 10.1093/nar/gkp1025

By:

Shirokikh, Nikolay E.;
Alkalaeva, Elena Z.;
Vassilenko, Konstantin S.;
Afonina, Zhanna A.;
Alekhina, Olga M.;
Kisselev, Lev L.;
Spirin, Alexander S.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 3, p. i, doi. 10.1093/nar/gkq104
Publication type:: Article

Differential regulation of CHOP translation by phosphorylated eIF4E under stress conditions.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 764, doi. 10.1093/nar/gkp1034

By:

Chen, Yi-Jiun;
Tan, Bertrand Chin-Ming;
Cheng, Ya-Yun;
Chen, Jin-Shin;
Lee, Sheng-Chung

Publication type:

Article

N7-Methylguanine at position 46 (m7G46) in tRNA from Thermus thermophilus is required for cell viability at high temperatures through a tRNA modification network.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 942, doi. 10.1093/nar/gkp1059

By:

Tomikawa, Chie;
Yokogawa, Takashi;
Kanai, Tamotsu;
Hori, Hiroyuki

Publication type:

Article

DNA structures from phosphate chemical shifts.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. e18, doi. 10.1093/nar/gkp1061

By:

Abi-Ghanem, Joséphine;
Heddi, Brahim;
Foloppe, Nicolas;
Hartmann, Brigitte

Publication type:

Article

Intrinsic flexibility of B-DNA: the experimental TRX scale.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 1034, doi. 10.1093/nar/gkp962

By:

Heddi, Brahim;
Oguey, Christophe;
Lavelle, Christophe;
Foloppe, Nicolas;
Hartmann, Brigitte

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 3, p. ii, doi. 10.1093/nar/gkq103
Publication type:: Article

Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. e13, doi. 10.1093/nar/gkp1012

By:

Blahnik, Kimberly R.;
Dou, Lei;
O’Geen, Henriette;
McPhillips, Timothy;
Xu, Xiaoqin;
Cao, Alina R.;
Iyengar, Sushma;
Nicolet, Charles M.;
Ludäscher, Bertram;
Korf, Ian;
Farnham, Peggy J.

Publication type:

Article

Homology-dependent interactions determine the order of strand exchange by IntDOT recombinase.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 958, doi. 10.1093/nar/gkp927

By:

Laprise, Jennifer;
Yoneji, Sumiko;
Gardner, Jeffrey F.

Publication type:

Article

The hydrophobic patch of ubiquitin is required to protect transactivator–promoter complexes from destabilization by the proteasomal ATPases.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 789, doi. 10.1093/nar/gkp1066

By:

Archer, Chase T.;
Kodadek, Thomas

Publication type:

Article

A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. e17, doi. 10.1093/nar/gkp942

By:

Barbosa-Morais, Nuno L.;
Dunning, Mark J.;
Samarajiwa, Shamith A.;
Darot, Jeremy F. J.;
Ritchie, Matthew E.;
Lynch, Andy G.;
Tavaré, Simon

Publication type:

Article

Adenovirus VA RNA-derived miRNAs target cellular genes involved in cell growth, gene expression and DNA repair.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 750, doi. 10.1093/nar/gkp1028

By:

Aparicio, Oscar;
Carnero, Elena;
Abad, Xabier;
Razquin, Nerea;
Guruceaga, Elizabeth;
Segura, Victor;
Fortes, Puri

Publication type:

Article

The helicase XPD unwinds bubble structures and is not stalled by DNA lesions removed by the nucleotide excision repair pathway.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 931, doi. 10.1093/nar/gkp1058

By:

Rudolf, Jana;
Rouillon, Christophe;
Schwarz-Linek, Ulrich;
White, Malcolm F.

Publication type:

Article

Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 868, doi. 10.1093/nar/gkp1032

By:

Albrecht, Marco;
Sharma, Cynthia M.;
Reinhardt, Richard;
Vogel, Jörg;
Rudel, Thomas

Publication type:

Article

Obituary.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 1057, doi. 10.1093/nar/gkp1156

By:

Gardner, Jeffrey F.;
Uhlenbeck, Olke C.

Publication type:

Article

A rapid and sensitive method to detect siRNA-mediated mRNA cleavage in vivo using 5′ RACE and a molecular beacon probe.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. e19, doi. 10.1093/nar/gkp1076

By:

Lasham, Annette;
Herbert, Mike;
Coppieters ‘t Wallant, Natacha;
Patel, Rachna;
Feng, Sheryl;
Eszes, Marika;
Cao, Helen;
Reid, Glen

Publication type:

Article

Are nucleosome positions in vivo primarily determined by histone–DNA sequence preferences?

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 709, doi. 10.1093/nar/gkp1043

By:

Stein, Arnold;
Takasuka, Taichi E.;
Collings, Clayton K.

Publication type:

Article

Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 810, doi. 10.1093/nar/gkp1085

By:

Ueki, Toshiyuki;
Lovley, Derek R.

Publication type:

Article

Hypoxia-inducible factor-1α regulates the expression of nucleotide excision repair proteins in keratinocytes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 3, p. 797, doi. 10.1093/nar/gkp1072

By:

Rezvani, Hamid Reza;
Mahfouf, Walid;
Ali, Nsrein;
Chemin, Cecile;
Ged, Cecile;
Kim, Arianna L.;
de Verneuil, Hubert;
Taïeb, Alain;
Bickers, David R.;
Mazurier, Frédéric

Publication type:

Article