Works matching IS 03051048 AND DT 2006 AND VI 34 AND IP 17

Results: 38

Spatial organization of transcription by RNA polymerase III.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4826, doi. 10.1093/nar/gkl656

By:

Haeusler, Rebecca A.;
Engelke, David R.

Publication type:

Article

Binding of human SLBP on the 3′-UTR of histone precursor H4-12 mRNA induces structural rearrangements that enable U7 snRNA anchoring.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4987, doi. 10.1093/nar/gkl666

By:

Jaeger, Sophie;
Martin, Franck;
Rudinger-Thirion, Joëlle;
Giegé, Richard;
Eriani, Gilbert

Publication type:

Article

Exportin-5 orthologues are functionally divergent among species.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4711, doi. 10.1093/nar/gkl663

By:

Shibata, Satoshi;
Sasaki, Mitsuho;
Miki, Takashi;
Shimamoto, Akira;
Furuichi, Yasuhiro;
Katahira, Jun;
Yoneda, Yoshihiro

Publication type:

Article

XE7: A novel splicing factor that interacts with ASF/SF2 and ZNF265.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4976, doi. 10.1093/nar/gkl660

By:

Mangs, A. Helena;
Speirs, Helen J.L.;
Goy, Christine;
Adams, David J.;
Markus, M. Andrea;
Morris, Brian J.

Publication type:

Article

Mouse microRNA profiles determined with a new and sensitive cloning method.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. e115, doi. 10.1093/nar/gkl653

By:

Takada, Shuji;
Berezikov, Eugene;
Yamashita, Yoshihiro;
Lagos-Quintana, Mariana;
Kloosterman, Wigard P.;
Enomoto, Munehiro;
Hatanaka, Hisashi;
Fujiwara, Shin-ichiro;
Watanabe, Hideki;
Soda, Manabu;
Choi, Young Lim;
Plasterk, Ronald H. A.;
Cuppen, Edwin;
Mano, Hiroyuki

Publication type:

Article

Isolation and characterization of the TIGA genes, whose transcripts are induced by growth arrest.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4878, doi. 10.1093/nar/gkl651

By:

Yabuta, Norikazu;
Onda, Hiroaki;
Watanabe, Masafumi;
Yoshioka, Naohisa;
Nagamori, Ippei;
Funatsu, Tomoyuki;
Toji, Shingo;
Tamai, Katsuyuki;
Nojima, Hiroshi

Publication type:

Article

Amino acid residues critical for RNA-binding in the N-terminal domain of the nucleocapsid protein are essential determinants for the infectivity of coronavirus in cultured cells.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4816, doi. 10.1093/nar/gkl650

By:

Tan, Yong Wah;
Fang, Shouguo;
Fan, Hui;
Lescar, Julien;
Liu, D.X.

Publication type:

Article

Effects of Dicer and Argonaute down-regulation on mRNA levels in human HEK293 cells.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4801, doi. 10.1093/nar/gkl646

By:

Schmitter, Daniela;
Filkowski, Jody;
Sewer, Alain;
Pillai, Ramesh S.;
Oakeley, Edward J.;
Zavolan, Mihaela;
Svoboda, Petr;
Filipowicz, Witold

Publication type:

Article

Homing endonuclease I-CreI derivatives with novel DNA target specificities.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4791, doi. 10.1093/nar/gkl645

By:

Rosen, Laura E.;
Morrison, Holly A.;
Masri, Selma;
Brown, Michael J.;
Springstubb, Brendan;
Sussman, Django;
Stoddard, Barry L.;
Seligman, Lenny M.

Publication type:

Article

Examination of the structural and functional versatility of glmS ribozymes by using in vitro selection.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4968, doi. 10.1093/nar/gkl643

By:

Link, Kristian H.;
Guo, Lixia;
Breaker, Ronald R.

Publication type:

Article

PLPD: reliable protein localization prediction from imbalanced and overlapped datasets.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4655, doi. 10.1093/nar/gkl638

By:

Lee, KiYoung;
Kim, Dae-Won;
Na, DoKyun;
Lee, Kwang H.;
Lee, Doheon

Publication type:

Article

A strand-passage conformation of DNA gyrase is required to allow the bacterial toxin, CcdB, to access its binding site.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4667, doi. 10.1093/nar/gkl636

By:

Smith, Andrew B.;
Maxwell, Anthony

Publication type:

Article

Zfp206 regulates ES cell gene expression and differentiation.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4780, doi. 10.1093/nar/gkl631

By:

Zhang, Wen;
Walker, Emily;
Tamplin, Owen J.;
Rossant, Janet;
Stanford, William L.;
Hughes, Timothy R.

Publication type:

Article

Genetic regulation of fluxes: iron homeostasis of Escherichia coli.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4960, doi. 10.1093/nar/gkl627

By:

Semsey, Szabolcs;
Andersson, Anna M. C.;
Krishna, Sandeep;
Jensen, Mogens Høgh;
Massé, Eric;
Sneppen, Kim

Publication type:

Article

Dynamic assembly of primers on nucleic acid templates.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4702, doi. 10.1093/nar/gkl625

By:

Leal, Nicole A.;
Sukeda, Makoto;
Benner, Steven A.

Publication type:

Article

Sequence-specific binding of single-stranded RNA: is there a code for recognition?

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4943, doi. 10.1093/nar/gkl620

By:

Auweter, Sigrid D.;
Oberstrass, Florian C.;
Allain, Frédéric H.-T.

Publication type:

Article

A spreadable, non-integrative and high copy number shuttle vector for Sulfolobus solfataricus based on the genetic element pSSVx from Sulfolobus islandicus.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. e114, doi. 10.1093/nar/gkl615

By:

Aucelli, Tiziana;
Contursi, Patrizia;
Girfoglio, Michele;
Rossi, Mosè;
Cannio, Raffaele

Publication type:

Article

A peptide with alternating lysines can act as a highly specific Z-DNA binding domain.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4937, doi. 10.1093/nar/gkl607

By:

Kim, Yang-Gyun;
Park, Hyun-Ju;
Kim, Kyeong Kyu;
Lowenhaupt, Ky;
Rich, Alexander

Publication type:

Article

Transcriptome response to heavy metal stress in Drosophila reveals a new zinc transporter that confers resistance to zinc.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4866, doi. 10.1093/nar/gkl606

By:

Yepiskoposyan, Hasmik;
Egli, Dieter;
Fergestad, Tim;
Selvaraj, Anand;
Treiber, Carina;
Multhaup, Gerd;
Georgiev, Oleg;
Schaffner, Walter

Publication type:

Article

Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4767, doi. 10.1093/nar/gkl602

By:

von Gromoff, Erika D.;
Schroda, Michael;
Oster, Ulrike;
Beck, Christoph F.

Publication type:

Article

AccuTyping: new algorithms for automated analysis of data from high-throughput genotyping with oligonucleotide microarrays.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. e116, doi. 10.1093/nar/gkl601

By:

Hu, Guohong;
Wang, Hui-Yun;
Greenawalt, Danielle M.;
Azaro, Marco A.;
Luo, Minjie;
Tereshchenko, Irina V.;
Cui, Xiangfeng;
Yang, Qifeng;
Gao, Richeng;
Shen, Li;
Li, Honghua

Publication type:

Article

Computational analysis of tissue-specific combinatorial gene regulation: predicting interaction between transcription factors in human tissues.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4925, doi. 10.1093/nar/gkl595

By:

Yu, Xueping;
Lin, Jimmy;
Zack, Donald J.;
Qian, Jiang

Publication type:

Article

A simple DNA stretching method for fluorescence imaging of single DNA molecules.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. e113, doi. 10.1093/nar/gkl593

By:

Chan, Ting-Fung;
Ha, Connie;
Phong, Angie;
Cai, Dongmei;
Wan, Eunice;
Leung, Lucinda;
Kwok, Pui-Yan;
Xiao, Ming

Publication type:

Article

DNA bending by bHLH charge variants.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4846, doi. 10.1093/nar/gkl552

By:

McDonald, Robert J.;
Kahn, Jason D.;
Maher, L. James

Publication type:

Article

CK2-mediated stimulation of Pol I transcription by stabilization of UBF–SL1 interaction.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4752, doi. 10.1093/nar/gkl581

By:

Lin, Chih-Yin;
Navarro, Sonia;
Reddy, Sita;
Comai, Lucio

Publication type:

Article

Human replication protein A unfolds telomeric G-quadruplexes.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4857, doi. 10.1093/nar/gkl564

By:

Salas, Tonatiuh Romero;
Petruseva, Irina;
Lavrik, Olga;
Bourdoncle, Anne;
Mergny, Jean-Louis;
Favre, Alain;
Saintomé, Carole

Publication type:

Article

Twin gradients in APOBEC3 edited HIV-1 DNA reflect the dynamics of lentiviral replication.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4677

By:

Suspène, Rodolphe;
Rusniok, Christophe;
Vartanian, Jean-Pierre;
Wain-Hobson, Simon

Publication type:

Article

Biochemical analysis of the substrate specificity and sequence preference of endonuclease IV from bacteriophage T4, a dC-specific endonuclease implicated in restriction of dC-substituted T4 DNA synthesis.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4743, doi. 10.1093/nar/gkl553

By:

Hirano, Nobutaka;
Ohshima, Hiroyuki;
Takahashi, Hideo

Publication type:

Article

Organization of chromosome ends in the rice blast fungus, Magnaporthe oryzae.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4685, doi. 10.1093/nar/gkl588

By:

Rehmeyer, Cathryn;
Li, Weixi;
Kusaba, Motoaki;
Kim, Yun-Sik;
Brown, Doug;
Staben, Chuck;
Dean, Ralph;
Farman, Mark

Publication type:

Article

Site-directed spin labeling measurements of nanometer distances in nucleic acids using a sequence-independent nitroxide probe.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4722, doi. 10.1093/nar/gkl546

By:

Cai, Qi;
Kusnetzow, Ana Karin;
Hubbell, Wayne L.;
Haworth, Ian S.;
Gacho, Gian Paola C.;
Van Eps, Ned;
Hideg, Kálmán;
Chambers, Eric J.;
Qin, Peter Z.

Publication type:

Article

Using RNA secondary structures to guide sequence motif finding towards single-stranded regions.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. e117, doi. 10.1093/nar/gkl544

By:

Hiller, Michael;
Pudimat, Rainer;
Busch, Anke;
Backofen, Rolf

Publication type:

Article

A novel archaeal regulatory protein, Sta1, activates transcription from viral promoters.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4837, doi. 10.1093/nar/gkl502

By:

Kessler, Alexandra;
Sezonov, Guennadi;
Guijarro, J. Iñaki;
Desnoues, Nicole;
Rose, Thierry;
Delepierre, Muriel;
Bell, Stephen D.;
Prangishvili, David

Publication type:

Article

CTD kinase I is required for the integrity of the rDNA tandem array.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4996, doi. 10.1093/nar/gkl493

By:

Grenetier, Sabrina;
Bouchoux, Céline;
Goguel, Valérie

Publication type:

Article

Homology modeling using parametric alignment ensemble generation with consensus and energy-based model selection.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. e112, doi. 10.1093/nar/gkl480

By:

Chivian, Dylan;
Baker, David

Publication type:

Article

A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4912, doi. 10.1093/nar/gkl472

By:

Lu, Zhi John;
Turner, Douglas H.;
Mathews, David H.

Publication type:

Article

The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4731, doi. 10.1093/nar/gkl465

By:

Zhong, Xuejun;
Garg, Parie;
Stith, Carrie M.;
McElhinny, Stephanie A. Nick;
Kissling, Grace E.;
Burgers, Peter M. J.;
Kunkel, Thomas A.

Publication type:

Article

Controlling activation of the RNA-dependent protein kinase by siRNAs using site-specific chemical modification.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4900, doi. 10.1093/nar/gkl464

By:

Puthenveetil, Sujiet;
Whitby, Landon;
Ren, Jin;
Kelnar, Kevin;
Krebs, Joseph F.;
Beal, Peter A.

Publication type:

Article

Identification of a structural and functional domain in xNAP1 involved in protein–protein interactions.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4893, doi. 10.1093/nar/gkl434

By:

Friedeberg, Christine;
Scarlett, Garry;
McGeeghan, John;
Abu-daya, Anita;
Guille, Matthew;
Kneale, Geoff

Publication type:

Article