Works matching IS 03051048 AND DT 2006 AND VI 34 AND IP 9

Results: 42

Genetic effects of oxidative DNA damages: comparative mutagenesis of the imidazole ring-opened formamidopyrimidines (Fapy lesions) and 8-oxo-purines in simian kidney cells.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2845, doi. 10.1093/nar/gkl399

By:

Kalam, M. Abul;
Haraguchi, Kazuhiro;
Chandani, Sushil;
Loechler, Edward L.;
Moriya, Maasaki;
Greenberg, Marc M.;
Basu, Ashis K.

Publication type:

Article

A modified version of a Fos-associated cluster in HBZ affects Jun transcriptional potency.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2761, doi. 10.1093/nar/gkl375

By:

Hivin, Patrick;
Arpin-André, Charlotte;
Clerc, Isabelle;
Barbeau, Benoit;
Mesnard, Jean-Michel

Publication type:

Article

Predicting cis-acting elements of Lactobacillus plantarum by comparative genomics with different taxonomic subgroups.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2844, doi. 10.1093/nar/gkl370

By:

Wels, Michiel;
Francke, Christof;
Kerkhoven, Robert;
Kleerebezem, Michiel;
Siezen, Roland J.

Publication type:

Article

Disparate requirements for the Walker A and B ATPase motifs of human RAD51D in homologous recombination.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2833, doi. 10.1093/nar/gkl366

By:

Wiese, Claudia;
Hinz, John M.;
Tebbs, Robert S.;
Nham, Peter B.;
Urbin, Salustra S.;
Collins, David W.;
Thompson, Larry H.;
Schild, David

Publication type:

Article

Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2686, doi. 10.1093/nar/gkl365

By:

Yuan, Ze-Chun;
Zaheer, Rahat;
Morton, Richard;
Finan, Turlough M.

Publication type:

Article

Collaboration of Werner syndrome protein and BRCA1 in cellular responses to DNA interstrand cross-links.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2751, doi. 10.1093/nar/gkl362

By:

Cheng, Wen-Hsing;
Kusumoto, Rika;
Opresko, Patricia L.;
Sui, XiuFen;
Huang, Shurong;
Nicolette, Matthew L.;
Paull, Tanya T.;
Campisi, Judith;
Seidman, Michael;
Bohr, Vilhelm A.

Publication type:

Article

Downstream signaling mechanism of the C-terminal activation domain of transcriptional coactivator CoCoA.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2736, doi. 10.1093/nar/gkl361

By:

Kim, Jeong Hoon;
Yang, Catherine K.;
Stallcup, Michael R.

Publication type:

Article

Evolution of small nucleolar RNAs in nematodes.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2676, doi. 10.1093/nar/gkl359

By:

Zemann, Anja;
op de Bekke, Anja;
Kiefmann, Martin;
Brosius, Jürgen;
Schmitz, Jürgen

Publication type:

Article

mazF, a novel counter-selectable marker for unmarked chromosomal manipulation in Bacillus subtilis.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e71, doi. 10.1093/nar/gkl358

By:

Zhang, Xiao-Zhou;
Yan, Xin;
Cui, Zhong-Li;
Hong, Qing;
Li, Shun-Peng

Publication type:

Article

Target prediction for small, noncoding RNAs in bacteria.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2791, doi. 10.1093/nar/gkl356

By:

Tjaden, Brian;
Goodwin, Sarah S.;
Opdyke, Jason A.;
Guillier, Maude;
Fu, Daniel X.;
Gottesman, Susan;
Storz, Gisela

Publication type:

Article

Long homopurine•homopyrimidine sequences are characteristic of genes expressed in brain and the pseudoautosomal region.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2663, doi. 10.1093/nar/gkl354

By:

Bacolla, Albino;
Collins, Jack R.;
Gold, Bert;
Chuzhanova, Nadia;
Yi, Ming;
Stephens, Robert M.;
Stefanov, Stefan;
Olsh, Adam;
Jakupciak, John P.;
Dean, Michael;
Lempicki, Richard A.;
Cooper, David N.;
Wells, Robert D.

Publication type:

Article

Caenorhabditis elegans reporter fusion genes generated by seamless modification of large genomic DNA clones.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e72, doi. 10.1093/nar/gkl352

By:

Dolphin, Colin T.;
Hope, Ian A.

Publication type:

Article

Improvements of rolling circle amplification (RCA) efficiency and accuracy using Thermus thermophilus SSB mutant protein.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e69, doi. 10.1093/nar/gkl350

By:

Inoue, Jin;
Shigemori, Yasushi;
Mikawa, Tsutomu

Publication type:

Article

The tale beyond the tail: histone core domain modifications and the regulation of chromatin structure.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2653, doi. 10.1093/nar/gkl338

By:

Mersfelder, Erica L.;
Parthun, Mark R.

Publication type:

Article

Thermodynamic characterization of an engineered tetracycline-binding riboswitch.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2607, doi. 10.1093/nar/gkl347

By:

Müller, Michael;
Weigand, Julia E.;
Weichenrieder, Oliver;
Suess, Beatrix

Publication type:

Article

Predicting RNA pseudoknot folding thermodynamics.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2634, doi. 10.1093/nar/gkl346

By:

Cao, Song;
Chen, Shi-Jie

Publication type:

Article

Modulation of telomere terminal structure by telomerase components in Candida albicans.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2710, doi. 10.1093/nar/gkl345

By:

Steinberg-Neifach, Olga;
Lue, Neal F.

Publication type:

Article

High potency silencing by single-stranded boranophosphate siRNA.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2773, doi. 10.1093/nar/gkl339

By:

Hall, Allison H. S.;
Wan, Jing;
Spesock, April;
Sergueeva, Zinaida;
Shaw, Barbara Ramsay;
Alexander, Kenneth A.

Publication type:

Article

Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2723, doi. 10.1093/nar/gkl348

By:

Ambrus, Attila;
Chen, Ding;
Dai, Jixun;
Bialis, Tiffanie;
Jones, Roger A.;
Yang, Danzhou

Publication type:

Article

Single-cell chromosomal imbalances detection by array CGH.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e68, doi. 10.1093/nar/gkl336

By:

Le Caignec, Cedric;
Spits, Claudia;
Sermon, Karen;
De Rycke, Martine;
Thienpont, Bernard;
Debrock, Sophie;
Staessen, Catherine;
Moreau, Yves;
Fryns, Jean-Pierre;
Van Steirteghem, Andre;
Liebaers, Inge;
Vermeesch, Joris R.

Publication type:

Article

GREM, a technique for genome-wide isolation and quantitative analysis of promoter active repeats.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e67, doi. 10.1093/nar/gkl335

By:

Buzdin, Anton;
Kovalskaya-Alexandrova, Elena;
Gogvadze, Elena;
Sverdlov, Eugene

Publication type:

Article

Multiple physical forms of excised group II intron RNAs in wheat mitochondria.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2782, doi. 10.1093/nar/gkl328

By:

Li-Pook-Than, Jennifer;
Bonen, Linda

Publication type:

Article

RNA aptamers selected against DNA polymerase β inhibit the polymerase activities of DNA polymerases β and κ.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2579, doi. 10.1093/nar/gkl326

By:

Gening, Leonid V.;
Klincheva, Svetlana A.;
Reshetnjak, Anastasia;
Grollman, Arthur P.;
Miller, Holly

Publication type:

Article

Yeast Protein Interactome topology provides framework for coordinated-functionality.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2812, doi. 10.1093/nar/gkl325

By:

Valente, André X. C. N.;
Cusick, Michael E.

Publication type:

Article

GAS41 interacts with transcription factor AP-2β and stimulates AP-2β-mediated transactivation.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2570, doi. 10.1093/nar/gkl319

By:

Ding, Xiaofeng;
Fan, Changzheng;
Zhou, Jianlin;
Zhong, Yingli;
Liu, Rushi;
Ren, Kaiqun;
Hu, Xiang;
Luo, Chang;
Xiao, Shunyong;
Wang, Yeqi;
Feng, Du;
Zhang, Jian

Publication type:

Article

Affinity of molecular interactions in the bacteriophage ϕ29 DNA packaging motor.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2698, doi. 10.1093/nar/gkl318

By:

Robinson, Mark A.;
Wood, Jonathan P.A.;
Capaldi, Stephanie A.;
Baron, Andrew J.;
Gell, Christopher;
Smith, D. Alastair;
Stonehouse, Nicola J.

Publication type:

Article

Structure-based prediction of insertion-site preferences of transposons into chromosomes.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2803, doi. 10.1093/nar/gkl301

By:

Geurts, Aron M.;
Hackett, Christopher S.;
Bell, Jason B.;
Bergemann, Tracy L.;
Collier, Lara S.;
Carlson, Corey M.;
Largaespada, David A.;
Hackett, Perry B.

Publication type:

Article

Kinetics of error generation in homologous B-family DNA polymerases.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2528, doi. 10.1093/nar/gkl300

By:

Hogg, Matthew;
Cooper, Wendy;
Reha-Krantz, Linda;
Wallace, Susan S.

Publication type:

Article

The two eIF4A helicases in Trypanosoma brucei are functionally distinct.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2495, doi. 10.1093/nar/gkl290

By:

Dhalia, Rafael;
Marinsek, Nina;
Reis, Christian R. S.;
Katz, Rodolfo;
Muniz, João R. C.;
Standart, Nancy;
Carrington, Mark;
de Melo Neto, Osvaldo P.

Publication type:

Article

G-quadruplex formation within the promoter of the KRAS proto-oncogene and its effect on transcription.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2536, doi. 10.1093/nar/gkl286

By:

Cogoi, Susanna;
Xodo, Luigi E.

Publication type:

Article

Multiple start codons and phosphorylation result in discrete Rad52 protein species.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2587, doi. 10.1093/nar/gkl280

By:

de Mayolo, Adriana Antúnez;
Lisby, Michael;
Erdeniz, Naz;
Thybo, Tanja;
Mortensen, Uffe H.;
Rothstein, Rodney

Publication type:

Article

Cloning and expression of new microRNAs from zebrafish.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2558, doi. 10.1093/nar/gkl278

By:

Kloosterman, Wigard P.;
Steiner, Florian A.;
Berezikov, Eugene;
de Bruijn, Ewart;
van de Belt, Jose;
Verheul, Mark;
Cuppen, Edwin;
Plasterk, Ronald H.A.

Publication type:

Article

Refining multiple sequence alignments with conserved core regions.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2598, doi. 10.1093/nar/gkl274

By:

Chakrabarti, Saikat;
Lanczycki, Christopher J.;
Panchenko, Anna R.;
Przytycka, Teresa M.;
Thiessen, Paul A.;
Bryant, Stephen H.

Publication type:

Article

Strong physical constraints on sequence-specific target location by proteins on DNA molecules.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2550, doi. 10.1093/nar/gkl271

By:

Flyvbjerg, Henrik;
Keatch, Steven A.;
Dryden, David T.F.

Publication type:

Article

Human Ape2 protein has a 3′–5′ exonuclease activity that acts preferentially on mismatched base pairs.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2508, doi. 10.1093/nar/gkl259

By:

Burkovics, Peter;
Szukacsov, Valeria;
Unk, Ildiko;
Haracska, Lajos

Publication type:

Article

Analysis of hepatitis C virus RNA dimerization and core–RNA interactions.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2618, doi. 10.1093/nar/gkl240

By:

Ivanyi-Nagy, Roland;
Kanevsky, Igor;
Gabus, Caroline;
Lavergne, Jean-Pierre;
Ficheux, Damien;
Penin, François;
Fossé, Philippe;
Darlix, Jean-Luc

Publication type:

Article

The initial step of DNA hairpin folding: a kinetic analysis using fluorescence correlation spectroscopy.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2516, doi. 10.1093/nar/gkl221

By:

Kim, Jiho;
Doose, Sören;
Neuweiler, Hannes;
Sauer, Markus

Publication type:

Article

Defining characteristics of Tn5 Transposase non-specific DNA binding.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2820, doi. 10.1093/nar/gkl179

By:

Steiniger, Mindy;
Adams, Christian D.;
Marko, John F.;
Reznikoff, William S.

Publication type:

Article

MicroRNA enrichment among short ‘ultraconserved’ sequences in insects.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e65, doi. 10.1093/nar/gkl173

By:

Tran, T.;
Havlak, P.;
Miller, J.

Publication type:

Article

THUMP from archaeal tRNA:m22G10 methyltransferase, a genuine autonomously folding domain.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. 2483, doi. 10.1093/nar/gkl145

By:

Gabant, Guillaume;
Auxilien, Sylvie;
Tuszynska, Irina;
Locard, Marie;
Gajda, Michal J.;
Chaussinand, Guylaine;
Fernandez, Bernard;
Dedieu, Alain;
Grosjean, Henri;
Golinelli-Pimpaneau, Béatrice;
Bujnicki, Janusz M.;
Armengaud, Jean

Publication type:

Article

Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e66, doi. 10.1093/nar/gkl133

By:

Pozhitkov, Alex;
Noble, Peter A.;
Domazet-Lošo, Tomislav;
Nolte, Arne W.;
Sonnenberg, Rainer;
Staehler, Peer;
Beier, Markus;
Tautz, Diethard

Publication type:

Article

Relationship between gene expression and observed intensities in DNA microarrays—a modeling study.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 9, p. e70, doi. 10.1093/nar/gkl122

By:

Held, G. A.;
Grinstein, G.;
Tu, Y.

Publication type:

Article