Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 1

Results: 40

Duplex strand joining reactions catalyzed by vaccinia virus DNA polymerase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 143

By:

Hamilton, Michael D.;
Nuara, Anthony A.;
Gammon, Don B.;
Buller, R. Mark;
Evans, David H.

Publication type:

Article

Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 1

By:

Gilbert, M. Thomas P.;
Binladen, Jonas;
Miller, Webb;
Wiuf, Carsten;
Willerslev, Eske;
Poinar, Hendrik;
Carlson, John E.;
Leebens-Mack, James H.;
Schuster, Stephan C.

Publication type:

Article

Transcription factor distribution in Escherichia coli: studies with FNR protein.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 269, doi. 10.1093/nar/gkl1023

By:

Grainger, David C.;
Aiba, Hirofumi;
Hurd, Douglas;
Browning, Douglas F.;
Busby, Stephen J. W.

Publication type:

Article

Gene loss rate: a probabilistic measure for the conservation of eukaryotic genes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. e7

By:

Borenstein, Elhanan;
Shlomi, Tomer;
Ruppin, Eytan;
Sharan, Roded

Publication type:

Article

p53 and p73 display common and distinct requirements for sequence specific binding to DNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 340, doi. 10.1093/nar/gkl1047

By:

Lokshin, Maria;
Li, Yingchun;
Gaiddon, Christian;
Prives, Carol

Publication type:

Article

Unanticipated differences between α- and γ-diaminobutyric acid-linked hairpin polyamide-alkylator conjugates.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 307, doi. 10.1093/nar/gkl1025

By:

Tsai, Sherry M.;
Farkas, Michelle E.;
Chou, C. James;
Gottesfeld, Joel M.;
Dervan, Peter B.

Publication type:

Article

Global analysis of microRNA target gene expression reveals that miRNA targets are lower expressed in mature mouse and Drosophila tissues than in the embryos.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 152, doi. 10.1093/nar/gkl1032

By:

Yu, Zhenbao;
Jian, Zhaofeng;
Shen, Shi-Hsiang;
Purisima, Enrico;
Wang, Edwin

Publication type:

Article

Systematic variation in mRNA 3′-processing signals during mouse spermatogenesis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 234, doi. 10.1093/nar/gkl919

By:

Liu, Donglin;
Brockman, J. Michael;
Dass, Brinda;
Hutchins, Lucie N.;
Singh, Priyam;
McCarrey, John R.;
MacDonald, Clinton C.;
Graber, Joel H.

Publication type:

Article

Chimeric DNA methyltransferases target DNA methylation to specific DNA sequences and repress expression of target genes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 100, doi. 10.1093/nar/gkl1035

By:

Li, Fuyang;
Papworth, Monika;
Minczuk, Michal;
Rohde, Christian;
Zhang, Yingying;
Ragozin, Sergei;
Jeltsch, Albert

Publication type:

Article

Switching base preferences of mismatch cleavage in endonuclease V: an improved method for scanning point mutations.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. e2

By:

Gao, Honghai;
Huang, Jianmin;
Barany, Francis;
Cao, Weiguo

Publication type:

Article

Nonlinear differential equation model for quantification of transcriptional regulation applied to microarray data of Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 279, doi. 10.1093/nar/gkl1001

By:

Vu, Tra Thi;
Vohradsky, Jiri

Publication type:

Article

Toxin–antitoxin regulation: bimodal interaction of YefM–YoeB with paired DNA palindromes exerts transcriptional autorepression.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 325

By:

Kędzierska, Barbara;
Lian, Lu-Yun;
Hayes, Finbarr

Publication type:

Article

Exploring membrane-associated NAC transcription factors in Arabidopsis: implications for membrane biology in genome regulation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 203, doi. 10.1093/nar/gkl1068

By:

Kim, Sun-Young;
Kim, Sang-Gyu;
Kim, Youn-Sung;
Seo, Pil Joon;
Bae, Mikyoung;
Yoon, Hye-Kyung;
Park, Chung-Mo

Publication type:

Article

Insect small nuclear RNA gene promoters evolve rapidly yet retain conserved features involved in determining promoter activity and RNA polymerase specificity.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 21, doi. 10.1093/nar/gkl982

By:

Hernandez, Genaro;
Valafar, Faramarz;
Stumph, William E.

Publication type:

Article

An improved method to identify BAC clones using pooled overgos.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. e5, doi. 10.1093/nar/gkl920

By:

Madishetty, Kavitha;
Condamine, Pascal;
Svensson, Jan T.;
Rodriguez, Edmundo;
Close, Timothy J.

Publication type:

Article

Complex splicing control of the human Thrombopoietin gene by intronic G runs.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 132

By:

Marcucci, Roberto;
Baralle, Francisco E.;
Romano, Maurizio

Publication type:

Article

A critical role for the loop region of the basic helix–loop–helix/leucine zipper protein Mlx in DNA binding and glucose-regulated transcription.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 35

By:

Ma, Lin;
Sham, Yuk Y.;
Walters, Kylie J.;
Towle, Howard C.

Publication type:

Article

Expanding the repertoire of DNA polymerase substrates: template-instructed incorporation of non-nucleoside triphosphate analogues by DNA polymerases β and λ.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 45

By:

Crespan, Emmanuele;
Alexandrova, Ludmila;
Khandazhinskaya, Anastasiya;
Jasko, Maxim;
Kukhanova, Marina;
Villani, Giuseppe;
Hübscher, Ulrich;
Spadari, Silvio;
Maga, Giovanni

Publication type:

Article

Functional interaction between the homeoprotein CDX1 and the transcriptional machinery containing the TATA-binding protein.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 175

By:

Calon, Alexandre;
Gross, Isabelle;
Davidson, Irwin;
Kedinger, Michèle;
Duluc, Isabelle;
Domon-Dell, Claire;
Freund, Jean-Noël

Publication type:

Article

An efficient method for multi-locus molecular haplotyping.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. e6, doi. 10.1093/nar/gkl742

By:

Konfortov, Bernard A.;
Bankier, Alan T.;
Dear, Paul H.

Publication type:

Article

Dispersion of the RmInt1 group II intron in the Sinorhizobium meliloti genome upon acquisition by conjugative transfer.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 214

By:

Nisa-Martínez, Rafael;
Jiménez-Zurdo, José I.;
Martínez-Abarca, Francisco;
Muñoz-Adelantado, Estefanía;
Toro, Nicolás

Publication type:

Article

Purine analog substitution of the HIV-1 polypurine tract primer defines regions controlling initiation of plus-strand DNA synthesis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 256

By:

Rausch, Jason W.;
Le Grice, Stuart F. J.

Publication type:

Article

Identification of functional, endogenous programmed −1 ribosomal frameshift signals in the genome of Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 165, doi. 10.1093/nar/gkl1033

By:

Jacobs, Jonathan L.;
Belew, Ashton T.;
Rakauskaite, Rasa;
Dinman, Jonathan D.

Publication type:

Article

Structure of a nucleotide-bound Clp1-Pcf11 polyadenylation factor.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 87

By:

Noble, Christian G.;
Beuth, Barbara;
Taylor, Ian A.

Publication type:

Article

Control of carry-over contamination for PCR-based DNA methylation quantification using bisulfite treated DNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. e4, doi. 10.1093/nar/gkl955

By:

Tetzner, Reimo;
Dietrich, Dimo;
Distler, Juergen

Publication type:

Article

RecA can stimulate the relaxation activity of topoisomerase I: Molecular basis of topoisomerase-mediated genome-wide transcriptional responses in Escherichia coli.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 79

By:

Reckinger, Amy R.;
Jeong, Kyeong Soo;
Khodursky, Arkady B.;
Hiasa, Hiroshi

Publication type:

Article

The p16INK4a tumor suppressor controls p21WAF1 induction in response to ultraviolet light.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 223

By:

Al-Mohanna, Mai A.;
Al-Khalaf, Huda H.;
Al-Yousef, Nujoud;
Aboussekhra, Abdelilah

Publication type:

Article

The chemical stability of abasic RNA compared to abasic DNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 58, doi. 10.1093/nar/gkl948

By:

Küpfer, Pascal A.;
Leumann, Christian J.

Publication type:

Article

Different levels of alternative splicing among eukaryotes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 125, doi. 10.1093/nar/gkl924

By:

Kim, Eddo;
Magen, Alon;
Ast, Gil

Publication type:

Article

Operon prediction in Pyrococcus furiosus.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 11, doi. 10.1093/nar/gkl974

By:

Tran, Thao T.;
Dam, Phuongan;
Su, Zhengchang;
Poole, Farris L.;
Adams, Michael W. W.;
Zhou, G. Tong;
Xu, Ying

Publication type:

Article

Multiple primer extension by DNA polymerase on a novel plastic DNA array coated with a biocompatible polymer.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. e3

By:

Kinoshita, Kenji;
Fujimoto, Kentaro;
Yakabe, Toru;
Saito, Shin;
Hamaguchi, Yuzo;
Kikuchi, Takayuki;
Nonaka, Ken;
Murata, Shigenori;
Masuda, Daisuke;
Takada, Wataru;
Funaoka, Sohei;
Arai, Susumu;
Nakanishi, Hisao;
Yokoyama, Kanehisa;
Fujiwara, Kazuhiko;
Matsubara, Kenichi

Publication type:

Article

Use of modified U1 snRNAs to inhibit HIV-1 replication.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 247

By:

Sajic, R.;
Lee, K.;
Asai, K.;
Sakac, D.;
Branch, D. R.;
Upton, C.;
Cochrane, A.

Publication type:

Article

An evaluation of contemporary hidden Markov model genefinders with a predicted exon taxonomy.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 317, doi. 10.1093/nar/gkl1026

By:

Knapp, Keith;
Chen, Yi-Ping Phoebe

Publication type:

Article

Epitope mapping using combinatorial phage-display libraries: a graph-based algorithm.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 69, doi. 10.1093/nar/gkl975

By:

Mayrose, Itay;
Shlomi, Tomer;
Rubinstein, Nimrod D.;
Gershoni, Jonathan M.;
Ruppin, Eytan;
Sharan, Roded;
Pupko, Tal

Publication type:

Article

Genome-wide analysis of transcriptional dependence and probable target sites for Abf1 and Rap1 in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 193, doi. 10.1093/nar/gkl1059

By:

Yarragudi, Arunadevi;
Parfrey, Laura Wegener;
Morse, Randall H.

Publication type:

Article

Operon prediction using both genome-specific and general genomic information.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 288, doi. 10.1093/nar/gkl1018

By:

Dam, Phuongan;
Olman, Victor;
Harris, Kyle;
Su, Zhengchang;
Xu, Ying

Publication type:

Article

Fragile X related protein 1 isoforms differentially modulate the affinity of fragile X mental retardation protein for G-quartet RNA structure.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 299

By:

Bechara, Elias;
Davidovic, Laetitia;
Melko, Mireille;
Bensaid, Mounia;
Tremblay, Sandra;
Grosgeorge, Josiane;
Khandjian, Edouard W.;
Lalli, Enzo;
Bardoni, Barbara

Publication type:

Article

CoMoDis: composite motif discovery in mammalian genomes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. e1

By:

Donaldson, Ian J.;
Göttgens, Berthold

Publication type:

Article

LEDGF/p75 interacts with divergent lentiviral integrases and modulates their enzymatic activity in vitro.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 113, doi. 10.1093/nar/gkl885

By:

Cherepanov, Peter

Publication type:

Article

Structural basis for activation of the therapeutic l-nucleoside analogs 3TC and troxacitabine by human deoxycytidine kinase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 1, p. 186

By:

Sabini, Elisabetta;
Hazra, Saugata;
Konrad, Manfred;
Burley, Stephen K.;
Lavie, Arnon

Publication type:

Article