Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 3

Results: 36

Deinococcus radiodurans RNA ligase exemplifies a novel ligase clade with a distinctive N-terminal module that is important for 5′-PO4 nick sealing and ligase adenylylation but dispensable for phosphodiester formation at an adenylylated nick.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 839, doi. 10.1093/nar/gkl1090

By:

Raymond, Amy;
Shuman, Stewart

Publication type:

Article

Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 999, doi. 10.1093/nar/gkl1124

By:

Arluison, Véronique;
Hohng, Sungchul;
Roy, Rahul;
Pellegrini, Olivier;
Régnier, Philippe;
Ha, Taekjip

Publication type:

Article

GEK1, a gene product of Arabidopsis thaliana involved in ethanol tolerance, is a d-aminoacyl-tRNA deacylase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 930, doi. 10.1093/nar/gkl1145

By:

Wydau, Sandra;
Ferri-Fioni, Maria-Laura;
Blanquet, Sylvain;
Plateau, Pierre

Publication type:

Article

Relationships between the physicochemical properties of an amphiphilic triblock copolymers/DNA complexes and their intramuscular transfection efficiency.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 728, doi. 10.1093/nar/gkl860

By:

Bello-Roufaï, Mahajoub;
Lambert, Olivier;
Pitard, Bruno

Publication type:

Article

Histone acetylation-independent transcription stimulation by a histone chaperone.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 705, doi. 10.1093/nar/gkl1077

By:

Kato, Kohsuke;
Miyaji-Yamaguchi, Mary;
Okuwaki, Mitsuru;
Nagata, Kyosuke

Publication type:

Article

The accessory subunit B of DNA polymerase γ is required for mitochondrial replisome function.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 902, doi. 10.1093/nar/gkl1116

By:

Farge, Géraldine;
Pham, Xuan Hoi;
Holmlund, Teresa;
Khorostov, Ivan;
Falkenberg, Maria

Publication type:

Article

Accurate, high-throughput typing of copy number variation using paralogue ratios from dispersed repeats.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. e19, doi. 10.1093/nar/gkl1089

By:

Armour, John A. L.;
Palla, Raquel;
Zeeuwen, Patrick L. J. M.;
Heijer, Martin den;
Schalkwijk, Joost;
Hollox, Edward J.

Publication type:

Article

Bacterial protein HU dictates the morphology of DNA condensates produced by crowding agents and polyamines.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 951, doi. 10.1093/nar/gkl1093

By:

Sarkar, Tumpa;
Vitoc, Iulia;
Mukerji, Ishita;
Hud, Nicholas V.

Publication type:

Article

Anatomy of Escherichia coli σ70 promoters.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 771, doi. 10.1093/nar/gkl956

By:

Shultzaberger, Ryan K.;
Chen, Zehua;
Lewis, Karen A.;
Schneider, Thomas D.

Publication type:

Article

Genome-wide screening for cis-regulatory variation using a classical diallel crossing scheme.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 1038, doi. 10.1093/nar/gkm007

By:

Kiekens, Raphaël;
Vercauteren, Annelies;
Moerkerke, Beatrijs;
Goetghebeur, Els;
Van Den Daele, Hilde;
Sterken, Roel;
Kuiper, Martin;
van Eeuwijk, Fred;
Vuylsteke, Marnik

Publication type:

Article

Translational control and target recognition by Escherichia coli small RNAs in vivo.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 1018, doi. 10.1093/nar/gkl1040

By:

Urban, Johannes H.;
Vogel, Jörg

Publication type:

Article

The Delta intracellular domain mediates TGF-β/Activin signaling through binding to Smads and has an important bi-directional function in the Notch–Delta signaling pathway.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 912, doi. 10.1093/nar/gkl1128

By:

Hiratochi, Masahiro;
Nagase, Hisashi;
Kuramochi, Yu;
Koh, Chang-Sung;
Ohkawara, Takeshi;
Nakayama, Kohzo

Publication type:

Article

Positional clustering improves computational binding site detection and identifies novel cis-regulatory sites in mammalian GABAA receptor subunit genes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. e20, doi. 10.1093/nar/gkl1062

By:

Reddy, Timothy E.;
Shakhnovich, Boris E.;
Roberts, Daniel S.;
Russek, Shelley J.;
DeLisi, Charles

Publication type:

Article

Tfb5 interacts with Tfb2 and facilitates nucleotide excision repair in yeast.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 861, doi. 10.1093/nar/gkl1085

By:

Zhou, Ying;
Kou, Haiping;
Wang, Zhigang

Publication type:

Article

Spermidine biases the resolution of Holliday junctions by phage λ integrase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 716, doi. 10.1093/nar/gkl1078

By:

Boldt, Jeffrey L.;
Kepple, Kevin V.;
Cassell, Geoffrey D.;
Segall, Anca M.

Publication type:

Article

The BRCT domain of mammalian Pes1 is crucial for nucleolar localization and rRNA processing.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 789, doi. 10.1093/nar/gkl1058

By:

Hölzel, Michael;
Grimm, Thomas;
Rohrmoser, Michaela;
Malamoussi, Anastassia;
Harasim, Thomas;
Gruber-Eber, Anita;
Kremmer, Elisabeth;
Eick, Dirk

Publication type:

Article

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. e14, doi. 10.1093/nar/gkl938

By:

Taberlet, Pierre;
Coissac, Eric;
Pompanon, François;
Gielly, Ludovic;
Miquel, Christian;
Valentini, Alice;
Vermat, Thierry;
Corthier, Gérard;
Brochmann, Christian;
Willerslev, Eske

Publication type:

Article

Rapid conditional knock-down–knock-in system for mammalian cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. e17, doi. 10.1093/nar/gkl1055

By:

Hölzel, Michael;
Rohrmoser, Michaela;
Orban, Mathias;
Hömig, Cornelia;
Harasim, Thomas;
Malamoussi, Anastassia;
Gruber-Eber, Anita;
Heissmeyer, Vigo;
Bornkamm, Georg;
Eick, Dirk

Publication type:

Article

Control of the yeast telomeric senescence survival pathways of recombination by the Mec1 and Mec3 DNA damage sensors and RPA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 822, doi. 10.1093/nar/gkl1081

By:

Grandin, Nathalie;
Charbonneau, Michel

Publication type:

Article

The 32 kDa subunit of replication protein A (RPA) participates in the DNA replication of Mung bean yellow mosaic India virus (MYMIV) by interacting with the viral Rep protein.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 755, doi. 10.1093/nar/gkl1088

By:

Singh, Dharmendra Kumar;
Islam, Mohammad Nurul;
Choudhury, Nirupam Roy;
Karjee, Sumona;
Mukherjee, Sunil Kumar

Publication type:

Article

Archaeal MCM has separable processivity, substrate choice and helicase domains.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 988, doi. 10.1093/nar/gkl1117

By:

Barry, Elizabeth R.;
McGeoch, Adam T.;
Kelman, Zvi;
Bell, Stephen D.

Publication type:

Article

The Lsm2-8 complex determines nuclear localization of the spliceosomal U6 snRNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 923, doi. 10.1093/nar/gkl1130

By:

Spiller, Michael P.;
Boon, Kum-Loong;
Reijns, Martin A. M.;
Beggs, Jean D.

Publication type:

Article

SET3p monomethylates histone H3 on lysine 9 and is required for the silencing of tandemly repeated transgenes in Chlamydomonas.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 939, doi. 10.1093/nar/gkl1149

By:

Casas-Mollano, J. Armando;
van Dijk, Karin;
Eisenhart, John;
Cerutti, Heriberto

Publication type:

Article

Nuclease activity of the MutS homologue MutS2 from Thermus thermophilus is confined to the Smr domain.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 850, doi. 10.1093/nar/gkl735

By:

Fukui, Kenji;
Kosaka, Hiromichi;
Kuramitsu, Seiki;
Masui, Ryoji

Publication type:

Article

Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 962, doi. 10.1093/nar/gkl1096

By:

Mandin, Pierre;
Repoila, Francis;
Vergassola, Massimo;
Geissmann, Thomas;
Cossart, Pascale

Publication type:

Article

DNA methylation immediately adjacent to active histone marking does not silence transcription.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 801, doi. 10.1093/nar/gkl1014

By:

Brinkman, Arie B.;
Pennings, Sebastiaan W. C.;
Braliou, Georgia G.;
Rietveld, Luc E. G.;
Stunnenberg, Hendrik G.

Publication type:

Article

Rapid DNA mapping by fluorescent single molecule detection.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. e16, doi. 10.1093/nar/gkl1044

By:

Xiao, Ming;
Phong, Angie;
Ha, Connie;
Chan, Ting-Fung;
Cai, Dongmei;
Leung, Lucinda;
Wan, Eunice;
Kistler, Amy L.;
DeRisi, Joseph L.;
Selvin, Paul R.;
Kwok, Pui-Yan

Publication type:

Article

Small-angle X-ray characterization of the nucleoprotein complexes resulting from DNA-induced oligomerization of HIV-1 integrase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 975, doi. 10.1093/nar/gkl1111

By:

Baranova, Svetlana;
Tuzikov, Fedor V.;
Zakharova, Olga D.;
Tuzikova, Natalia A.;
Calmels, Christina;
Litvak, Simon;
Tarrago-Litvak, Laura;
Parissi, Vincent;
Nevinsky, Georgy A.

Publication type:

Article

The MH1 domain of Smad3 interacts with Pax6 and represses autoregulation of the Pax6 P1 promoter.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 890, doi. 10.1093/nar/gkl1105

By:

Grocott, Timothy;
Frost, Victoria;
Maillard, Marjorie;
Johansen, Terje;
Wheeler, Grant N.;
Dawes, Lucy J.;
Wormstone, I. Michael;
Chantry, Andrew

Publication type:

Article

High resolution array-CGH analysis of single cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. e15, doi. 10.1093/nar/gkl1030

By:

Fiegler, Heike;
Geigl, Jochen B.;
Langer, Sabine;
Rigler, Diane;
Porter, Keith;
Unger, Kristian;
Carter, Nigel P.;
Speicher, Michael R.

Publication type:

Article

Free energy of DNA duplex formation on short oligonucleotide microarrays.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. e18, doi. 10.1093/nar/gkl1064

By:

Zhang, Li;
Wu, Chunlei;
Carta, Roberto;
Zhao, Haitao

Publication type:

Article

Deletion of a trypanosome telomere leads to loss of silencing and progressive loss of terminal DNA in the absence of cell cycle arrest.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 872, doi. 10.1093/nar/gkl1100

By:

Glover, Lucy;
Alsford, Sam;
Beattie, Caroline;
Horn, David

Publication type:

Article

Cooperative binding of the yeast Spt10p activator to the histone upstream activating sequences is mediated through an N-terminal dimerization domain.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 812, doi. 10.1093/nar/gkl1079

By:

Mendiratta, Geetu;
Eriksson, Peter R.;
Clark, David J.

Publication type:

Article

Specific targeting of cytosine methylation to DNA sequences in vivo.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 740, doi. 10.1093/nar/gkl1053

By:

Smith, Alexander E.;
Ford, Kevin G.

Publication type:

Article

Contributions of ubiquitin- and PCNA-binding domains to the activity of Polymerase η in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 881, doi. 10.1093/nar/gkl1102

By:

Parker, Joanne L.;
Bielen, Aleksandra B.;
Dikic, Ivan;
Ulrich, Helle D.

Publication type:

Article

Gene-specific recruitment of positive and negative elongation factors during stimulated transcription of the MKP-1 gene in neuroendocrine cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 1007, doi. 10.1093/nar/gkl1138

By:

Fujita, Toshitsugu;
Ryser, Stephan;
Tortola, Silvia;
Piuz, Isabelle;
Schlegel, Werner

Publication type:

Article