Works matching IS 03051048 AND DT 2005 AND VI 33 AND IP 9

Results: 39

Targeted disruption of transcriptional regulatory function of p53 by a novel efficient method for introducing a decoy oligonucleotide into nuclei.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e88, doi. 10.1093/nar/gni088

By:

Sakaguchi, Masakiyo;
Nukui, Takamasa;
Sonegawa, Hiroyuki;
Murata, Hitoshi;
Futami, Junichiro;
Yamada, Hidenori;
Huh, Nam-ho

Publication type:

Article

Natural and synthetic tetracycline-inducible promoters for use in the antibiotic-producing bacteria Streptomyces.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e87, doi. 10.1093/nar/gni086

By:

Rodríguez-García, Antonio;
Combes, Patricia;
Pérez-Redondo, Rosario;
Smith, Matthew C. A.;
Smith, Margaret C. M.

Publication type:

Article

A versatile reducible polycation-based system for efficient delivery of a broad range of nucleic acids.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e86, doi. 10.1093/nar/gni085

By:

Read, Martin L.;
Singh, Surjeet;
Ahmed, Zubair;
Stevenson, Mark;
Briggs, Simon S.;
Oupicky, David;
Barrett, Lee B.;
Spice, Rachel;
Kendall, Mark;
Berry, Martin;
Preece, Jon A.;
Logan, Ann;
Seymour, Leonard W.

Publication type:

Article

Magnetically assisted DNA assays: high selectivity using conjugated polymers for amplified fluorescent transduction.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e83

By:

Xu, Hui;
Wu, Haiping;
Huang, Fei;
Song, Shiping;
Li, Wenxin;
Cao, Yong;
Fan, Chunhai

Publication type:

Article

A novel transgenic chimaeric mouse system for the rapid functional evaluation of genes encoding secreted proteins.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e85, doi. 10.1093/nar/gni083

By:

Kakitani, Makoto;
Oshima, Takeshi;
Horikoshi, Kaori;
Yoshitome, Tetsuo;
Ueda, Akiko;
Kajikawa, Miwa;
Iba, Yumi;
Ozone, Yoshinao;
Ijima, Yuki;
Yoshino, Tohko;
Itoh, Mikiko;
Seki, Sachiko;
Aoki, Ayako;
Ishihara, Toshie;
Shionoya, Michiyo;
Makino, Utako;
Kitada, Rina;
Ohguma, Atsuko;
Ohta, Takami;
Yoshida, Yoshimasa

Publication type:

Article

Sequence dependence of cross-hybridization on short oligo microarrays.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e84

By:

Wu, Chunlei;
Carta, Roberto;
Zhang, Li

Publication type:

Article

Offset recombinant PCR: a simple but effective method for shuffling compact heterologous domains.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e82, doi. 10.1093/nar/gni081

By:

Rozak, David A.;
Bryan, Philip N.

Publication type:

Article

Oligonucleotide-assisted cleavage and ligation: a novel directional DNA cloning technology to capture cDNAs. Application in the construction of a human immune antibody phage-display library.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e81, doi. 10.1093/nar/gni080

By:

Schoonbroodt, Sonia;
Frans, Nicolas;
DeSouza, Mark;
Eren, Rachel;
Priel, Smadar;
Brosh, Naama;
Ben-Porath, Judith;
Zauberman, Arie;
Ilan, Ehud;
Dagan, Shlomo;
Cohen, Edward H.;
Hoogenboom, Hennie R.;
Ladner, Robert Charles;
Hoet, René M.

Publication type:

Article

Triplet nucleotide removal at random positions in a target gene: the tolerance of TEM-1 β-lactamase to an amino acid deletion.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. e80, doi. 10.1093/nar/gni077

By:

Jones, D. Dafydd

Publication type:

Article

Four base recognition by triplex-forming oligonucleotides at physiological pH.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3025, doi. 10.1093/nar/gki625

By:

Rusling, David A.;
Powers, Vicki E. C.;
Ranasinghe, Rohan T.;
Wang, Yang;
Osborne, Sadie D.;
Brown, Tom;
Fox, Keith R.

Publication type:

Article

Stimulation of the XPB ATP-dependent helicase by the beta subunit of TFIIE.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3072, doi. 10.1093/nar/gki623

By:

Lin, Yin C.;
Gralla, Jay D.

Publication type:

Article

Activity of 3′-thioAMP derivatives as ribosomal P-site substrates.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3065, doi. 10.1093/nar/gki617

By:

Dorner, Silke;
Schmid, Walther;
Barta, Andrea

Publication type:

Article

Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)<sub>2</sub> observed by neutron diffraction measurements.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3017, doi. 10.1093/nar/gki616

By:

Arai, Shigeki;
Chatake, Toshiyuki;
Ohhara, Takashi;
Kurihara, Kazuo;
Tanaka, Ichiro;
Suzuki, Nobuhiro;
Fujimoto, Zui;
Mizuno, Hiroshi;
Niimura, Nobuo

Publication type:

Article

GeMS: an advanced software package for designing synthetic genes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3011, doi. 10.1093/nar/gki614

By:

Jayaraj, Sebastian;
Reid, Ralph;
Santi, Daniel V.

Publication type:

Article

DNA damage response and Ku80 function in the vertebrate embryo.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3002, doi. 10.1093/nar/gki613

By:

Bladen, Catherine L.;
Lam, Wai K.;
Dynan, William S.;
Kozlowski, David J.

Publication type:

Article

5-Halogenated pyrimidine lesions within a CpG sequence context mimic 5-methylcytosine by enhancing the binding of the methyl-CpG-binding domain of methyl-CpG-binding protein 2 (MeCP2).

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3057, doi. 10.1093/nar/gki612

By:

Valinluck, Victoria;
Liu, Pingfang;
Kang, Joseph I.;
Burdzy, Artur;
Sowers, Lawrence C.

Publication type:

Article

Human XPC-hHR23B interacts with XPA-RPA in the recognition of triplex-directed psoralen DNA interstrand crosslinks.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2993, doi. 10.1093/nar/gki610

By:

Thoma, Brian S.;
Wakasugi, Mitsuo;
Christensen, Jesper;
Reddy, Madhava C.;
Vasquez, Karen M.

Publication type:

Article

Prevalence of quadruplexes in the human genome.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2908, doi. 10.1093/nar/gki609

By:

Huppert, Julian L.;
Balasubramanian, Shankar

Publication type:

Article

Global analysis of yeast RNA processing identifies new targets of RNase III and uncovers a link between tRNA 5′ end processing and tRNA splicing.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3048, doi. 10.1093/nar/gki608

By:

Hiley, Shawna L.;
Babak, Tomas;
Hughes, Timothy R.

Publication type:

Article

DNA binding and helicase actions of mouse MCM4/6/7 helicase.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 3033, doi. 10.1093/nar/gki607

By:

You, Zhiying;
Masai, Hisao

Publication type:

Article

Formation and properties of hairpin and tetraplex structures of guanine-rich regulatory sequences of muscle-specific genes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2887, doi. 10.1093/nar/gki606

By:

Yafe, Anat;
Etzioni, Shulamit;
Weisman-Shomer, Pnina;
Fry, Michael

Publication type:

Article

Internal initiation of translation of the TrkB mRNA is mediated by multiple regions within the 5′ leader.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2929, doi. 10.1093/nar/gki605

By:

Dobson, Tara;
Minic, Angela;
Nielsen, Kirsten;
Amiott, Elizabeth;
Krushel, Les

Publication type:

Article

Composite genome map and recombination parameters derived from three archetypal lineages of Toxoplasma gondii.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2980, doi. 10.1093/nar/gki604

By:

Khan, Asis;
Taylor, Sonya;
Su, Chunlei;
Mackey, Aaron J.;
Boyle, Jon;
Cole, Robert;
Glover, Darius;
Tang, Keliang;
Paulsen, Ian T.;
Berriman, Matt;
Boothroyd, John C.;
Pfefferkorn, Elmer R.;
Dubey, J. P.;
Ajioka, James W.;
Roos, David S.;
Wootton, John C.;
Sibley, L. David

Publication type:

Article

The ELAV RNA-stability factor HuR binds the 5′-untranslated region of the human IGF-IR transcript and differentially represses cap-dependent and IRES-mediated translation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2962, doi. 10.1093/nar/gki603

By:

Meng, Zheng;
King, Peter H.;
Nabors, L. Burt;
Jackson, Nateka L.;
Chen, Ching-Yi;
Emanuel, Peter D.;
Blume, Scott W.

Publication type:

Article

Kinetic analysis of the role of the tyrosine 13, phenylalanine 56 and glutamine 54 network in the U1A/U1 hairpin II interaction.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2917, doi. 10.1093/nar/gki602

By:

Law, Michael J.;
Chambers, Eric J.;
Katsamba, Phinikoula S.;
Haworth, Ian S.;
Laird-Offringa, Ite A.

Publication type:

Article

N-methylpurine DNA glycosylase overexpression increases alkylation sensitivity by rapidly removing non-toxic 7-methylguanine adducts.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2859, doi. 10.1093/nar/gki601

By:

Rinne, M. L.;
He, Y.;
Pachkowski, B. F.;
Nakamura, J.;
Kelley, M. R.

Publication type:

Article

HP1 modulates the transcription of cell-cycle regulators in Drosophila melanogaster.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2852, doi. 10.1093/nar/gki584

By:

De Lucia, Filomena;
Ni, Jian-Quan;
Vaillant, Catherine;
Sun, Fang-Lin

Publication type:

Article

Mapping of transcription start sites in Saccharomyces cerevisiae using 5′ SAGE.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2838, doi. 10.1093/nar/gki583

By:

Zhang, Zhihong;
Dietrich, Fred S.

Publication type:

Article

CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2952, doi. 10.1093/nar/gki582

By:

Heisler, Lawrence E.;
Torti, Dax;
Boutros, Paul C.;
Watson, John;
Chan, Charles;
Winegarden, Neil;
Takahashi, Mark;
Yau, Patrick;
Huang, Tim H.-M.;
Farnham, Peggy J.;
Jurisica, Igor;
Woodgett, James R.;
Bremner, Rod;
Penn, Linda Z.;
Der, Sandy D.

Publication type:

Article

Selection of novel mediators of E2F1-induced apoptosis through retroviral expression of an antisense cDNA library.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2813, doi. 10.1093/nar/gki581

By:

Li, Z.;
Stanelle, J.;
Leurs, C.;
Hanenberg, H.;
Pützer, B. M.

Publication type:

Article

Automated band mapping in electrophoretic gel images using background information.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2806, doi. 10.1093/nar/gki580

By:

Zerr, Troy;
Henikoff, Steven

Publication type:

Article

The CHD remodeling factor Hrp1 stimulates CENP-A loading to centromeres.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2868, doi. 10.1093/nar/gki579

By:

Walfridsson, Julian;
Bjerling, Pernilla;
Thalen, Maria;
Yoo, Eung-Jae;
Park, Sang Dai;
Ekwall, Karl

Publication type:

Article

New NTP analogs: the synthesis of 4′-thioUTP and 4′-thioCTP and their utility for SELEX.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2942, doi. 10.1093/nar/gki578

By:

Kato, Yuka;
Minakawa, Noriaki;
Komatsu, Yasuo;
Kamiya, Hiroyuki;
Ogawa, Naoki;
Harashima, Hideyoshi;
Matsuda, Akira

Publication type:

Article

Unusual features of fibrillarin cDNA and gene structure in Euglena gracilis: evolutionary conservation of core proteins and structural predictions for methylation-guide box C/D snoRNPs throughout the domain Eucarya.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2781, doi. 10.1093/nar/gki574

By:

Russell, Anthony G.;
Watanabe, Yoh-ichi;
Charette, J. Michael;
Gray, Michael W.

Publication type:

Article

Prediction of functional modules based on comparative genome analysis and Gene Ontology application.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2822

By:

Wu, Hongwei;
Su, Zhengchang;
Mao, Fenglou;
Olman, Victor;
Xu, Ying

Publication type:

Article

Effect of 6-thioguanine on the stability of duplex DNA.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2880, doi. 10.1093/nar/gki572

By:

Bohon, Jen;
de los Santos, Carlos R.

Publication type:

Article

Identification of CELF splicing activation and repression domains in vivo.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2769, doi. 10.1093/nar/gki561

By:

Han, Jin;
Cooper, Thomas A.

Publication type:

Article

Localization of spermine binding sites in 23S rRNA by photoaffinity labeling: parsing the spermine contribution to ribosomal 50S subunit functions.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2792, doi. 10.1093/nar/gki557

By:

Xaplanteri, Maria A.;
Petropoulos, Alexandros D.;
Dinos, George P.;
Kalpaxis, Dimitrios L.

Publication type:

Article

Highly prevalent putative quadruplex sequence motifs in human DNA.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 9, p. 2901, doi. 10.1093/nar/gki553

By:

Todd, Alan K.;
Johnston, Matthew;
Neidle, Stephen

Publication type:

Article