Results: 48
DNA-binding proteins from MBD through ZF to BEN: recognition of cytosine methylation status by one arginine with two conformations.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11442, doi. 10.1093/nar/gkae832
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- Publication type:
- Article
Testis-specific H2B.W1 disrupts nucleosome integrity by reducing DNA–histone interactions.
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- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11612, doi. 10.1093/nar/gkae825
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- Article
Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11895, doi. 10.1093/nar/gkae820
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- Article
Amphiphilic shuttle peptide delivers base editor ribonucleoprotein to correct the CFTR R553X mutation in well-differentiated airway epithelial cells.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11911, doi. 10.1093/nar/gkae819
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- Article
Closing in on human methylation—the versatile family of seven-β-strand (METTL) methyltransferases.
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- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11423, doi. 10.1093/nar/gkae816
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- Article
Kinetic mechanism and determinants of EF-P recruitment to translating ribosomes.
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- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11870, doi. 10.1093/nar/gkae815
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- Article
Phage defence loci of Streptococcus thermophilus—tip of the anti-phage iceberg?
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- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11853, doi. 10.1093/nar/gkae814
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- Article
Stochastic nature and physiological implications of 5′-NAD RNA cap in bacteria.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11838, doi. 10.1093/nar/gkae813
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- Publication type:
- Article
High-throughput single telomere analysis using DNA microarray and fluorescent in situ hybridization.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. e96, doi. 10.1093/nar/gkae812
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- Article
Enhanced Golden Gate Assembly: evaluating overhang strength for improved ligation efficiency.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. e95, doi. 10.1093/nar/gkae809
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- Article
Transcription start site scanning requires the fungi-specific hydrophobic loop of Tfb3.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11602, doi. 10.1093/nar/gkae805
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- Publication type:
- Article
FRAME: flap endonuclease 1-engineered PAM module for precise and sensitive modulation of CRISPR/Cas12a trans-cleavage activity.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11884, doi. 10.1093/nar/gkae804
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- Publication type:
- Article
4CAC: 4-class classifier of metagenome contigs using machine learning and assembly graphs.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. e94, doi. 10.1093/nar/gkae799
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- Publication type:
- Article
A transcription-independent role for HIF-1α in modulating microprocessor assembly.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11806, doi. 10.1093/nar/gkae792
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- Publication type:
- Article
G-quadruplexes in an SVA retrotransposon cause aberrant TAF1 gene expression in X-linked dystonia parkinsonism.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11571, doi. 10.1093/nar/gkae797
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- Publication type:
- Article
Polyubiquitinated PCNA triggers SLX4-mediated break-induced replication in alternative lengthening of telomeres (ALT) cancer cells.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11785, doi. 10.1093/nar/gkae785
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- Article
The transition state for coupled folding and binding of a disordered DNA binding domain resembles the unbound state.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11822, doi. 10.1093/nar/gkae794
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- Publication type:
- Article
IRescue: uncertainty-aware quantification of transposable elements expression at single cell level.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. e93, doi. 10.1093/nar/gkae793
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- Publication type:
- Article
Chem-CRISPR/dCas9<sup>FCPF</sup>: a platform for chemically induced epigenome editing.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11587, doi. 10.1093/nar/gkae798
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- Publication type:
- Article
A deep learning-based method enables the automatic and accurate assembly of chromosome-level genomes.
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- Nucleic Acids Research, 2024, v. 52, n. 19, p. e92, doi. 10.1093/nar/gkae789
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- Publication type:
- Article
Combining Nanopore direct RNA sequencing with genetics and mass spectrometry for analysis of T-loop base modifications across 42 yeast tRNA isoacceptors.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 12074, doi. 10.1093/nar/gkae796
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- Publication type:
- Article
DNA breathing integration with deep learning foundational model advances genome-wide binding prediction of human transcription factors.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. e91, doi. 10.1093/nar/gkae783
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- Publication type:
- Article
Advancing microRNA target site prediction with transformer and base-pairing patterns.
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- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11455, doi. 10.1093/nar/gkae782
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- Publication type:
- Article
The ABCF ATPase New1 resolves translation termination defects associated with specific tRNA<sup>Arg</sup> and tRNA<sup>Lys</sup> isoacceptors in the P site.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 12005, doi. 10.1093/nar/gkae748
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- Publication type:
- Article
Mei5–Sae3 stabilizes Dmc1 nucleating clusters for efficient Dmc1 assembly on RPA-coated single-stranded DNA.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11768, doi. 10.1093/nar/gkae780
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- Publication type:
- Article
MBNL splicing factors regulate the microtranscriptome of skeletal muscles.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 12055, doi. 10.1093/nar/gkae774
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- Publication type:
- Article
A single rare σ<sup>70</sup> variant establishes a unique gene expression pattern in the E. coli pathobiont LF82.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11552, doi. 10.1093/nar/gkae773
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- Publication type:
- Article
Mechanism of BCDX2-mediated RAD51 nucleation on short ssDNA stretches and fork DNA.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11738, doi. 10.1093/nar/gkae770
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- Publication type:
- Article
Eukaryotic initiation factor 4B is a multi-functional RNA binding protein that regulates histone mRNAs.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 12039, doi. 10.1093/nar/gkae767
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- Publication type:
- Article
DNA double-strand break movement in heterochromatin depends on the histone acetyltransferase dGcn5.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11753, doi. 10.1093/nar/gkae775
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- Publication type:
- Article
Engineered Cas9 variants bypass Keap1-mediated degradation in human cells and enhance epigenome editing efficiency.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11536, doi. 10.1093/nar/gkae761
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- Publication type:
- Article
PARP1-TRIM44-MRN loop dictates the response to PARP inhibitors.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11720, doi. 10.1093/nar/gkae756
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- Publication type:
- Article
Nucleotide excision repair of aflatoxin-induced DNA damage within the 3D human genome organization.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11704, doi. 10.1093/nar/gkae755
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- Publication type:
- Article
ADAR3 modulates neuronal differentiation and regulates mRNA stability and translation.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 12021, doi. 10.1093/nar/gkae753
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- Publication type:
- Article
LAP2alpha facilitates myogenic gene expression by preventing nucleoplasmic lamin A/C from spreading to active chromatin regions.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11500, doi. 10.1093/nar/gkae752
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- Publication type:
- Article
DNA methylation by CcrM contributes to genome maintenance in the Agrobacterium tumefaciens plant pathogen.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11519, doi. 10.1093/nar/gkae757
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- Publication type:
- Article
Elucidation of the molecular mechanism of the breakage-fusion-bridge (BFB) cycle using a CRISPR-dCas9 cellular model.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11689, doi. 10.1093/nar/gkae747
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- Publication type:
- Article
Elucidating microRNA-34a organisation within human Argonaute-2 by dynamic nuclear polarisation-enhanced magic angle spinning NMR.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11995, doi. 10.1093/nar/gkae744
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- Publication type:
- Article
Sarbecovirus programmed ribosome frameshift RNA element folding studied by NMR spectroscopy and comparative analyses.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11960, doi. 10.1093/nar/gkae704
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- Publication type:
- Article
Histone variant macroH2A1 regulates synchronous firing of replication origins in the inactive X chromosome.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11659, doi. 10.1093/nar/gkae734
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- Publication type:
- Article
Synergistic action of human RNaseH2 and the RNA helicase-nuclease DDX3X in processing R-loops.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11641, doi. 10.1093/nar/gkae731
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- Publication type:
- Article
A plant-specific clade of serine/arginine-rich proteins regulates RNA splicing homeostasis and thermotolerance in tomato.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11466, doi. 10.1093/nar/gkae730
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- Publication type:
- Article
RNA helicase D1PAS1 resolves R-loops and forms a complex for mouse pachytene piRNA biogenesis required for male fertility.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11973, doi. 10.1093/nar/gkae712
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- Publication type:
- Article
CRISPR screening uncovers nucleolar RPL22 as a heterochromatin destabilizer and senescence driver.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11481, doi. 10.1093/nar/gkae740
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- Publication type:
- Article
RNA-directed peptide synthesis across a nicked loop.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11415, doi. 10.1093/nar/gkae702
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- Publication type:
- Article
KREH2 helicase represses ND7 mRNA editing in procyclic-stage Trypanosoma brucei by opposite modulation of canonical and 'moonlighting' gRNA utilization creating a proposed mRNA structure.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11940, doi. 10.1093/nar/gkae699
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- Publication type:
- Article
A CRISPR-dCas13 RNA-editing tool to study alternative splicing.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11926, doi. 10.1093/nar/gkae682
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- Publication type:
- Article
Partial wrapping of single-stranded DNA by replication protein A and modulation through phosphorylation.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11626, doi. 10.1093/nar/gkae584
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- Publication type:
- Article