Works matching IS 03051048 AND DT 2023 AND VI 51 AND IP 1

Results: 27

ViLoN—a multi-layer network approach to data integration demonstrated for patient stratification.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. e6, doi. 10.1093/nar/gkac988

By:

Kańduła, Maciej M;
Aldoshin, Alexander D;
Singh, Swati;
Kolaczyk, Eric D;
Kreil, David P

Publication type:

Article

Rapid single-molecule characterisation of enzymes involved in nucleic-acid metabolism.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. e5, doi. 10.1093/nar/gkac949

By:

Mueller, Stefan H;
Fitschen, Lucy J;
Shirbini, Afnan;
Hamdan, Samir M;
Spenkelink, Lisanne M;
van Oijen, Antoine M

Publication type:

Article

Profiling the intragenic toxicity determinants of toxin–antitoxin systems: revisiting hok/Sok regulation.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. e4, doi. 10.1093/nar/gkac940

By:

Le Rhun, Anaïs;
Tourasse, Nicolas J;
Bonabal, Simon;
Iost, Isabelle;
Boissier, Fanny;
Darfeuille, Fabien

Publication type:

Article

Echtvar: compressed variant representation for rapid annotation and filtering of SNPs and indels.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. e3, doi. 10.1093/nar/gkac931

By:

Pedersen, Brent S;
de Ridder, Jeroen

Publication type:

Article

RNA cytometry of single-cells using semi-permeable microcapsules.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. e2, doi. 10.1093/nar/gkac918

By:

Leonaviciene, Greta;
Mazutis, Linas

Publication type:

Article

Design of programmable post-translational switch control platform for on-demand protein secretion in mammalian cells.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. e1, doi. 10.1093/nar/gkac916

By:

Mansouri, Maysam;
Ray, Preetam Guha;
Franko, Nik;
Xue, Shuai;
Fussenegger, Martin

Publication type:

Article

De novo sequencing, diploid assembly, and annotation of the black carpenter ant, Camponotus pennsylvanicus, and its symbionts by one person for $1000, using nanopore sequencing.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 17, doi. 10.1093/nar/gkac510

By:

Faulk, Christopher

Publication type:

Article

Identification of mechanism of cancer-cell-specific reactivation of hTERT offers therapeutic opportunities for blocking telomerase specifically in human colorectal cancer.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 1, doi. 10.1093/nar/gkac479

By:

Akıncılar, Semih Can;
Chua, Joelle Yi Heng;
Ng, Qin Feng;
Chan, Claire Hian Tzer;
Eslami-S, Zahra;
Chen, Kaijing;
Low, Joo-Leng;
Arumugam, Surendar;
Aswad, Luay;
Chua, Clarinda;
Tan, Iain Beehuat;
DasGupta, Ramanuj;
Fullwood, Melissa Jane;
Tergaonkar, Vinay

Publication type:

Article

Correction to 'LitCovid in 2022: an information resource for the COVID-19 literature'.

Published in:: 2023
Publication type:: Correction Notice

The recognition of structured elements by a conserved groove distant from domains associated with catalysis is an essential determinant of RNase E.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 365, doi. 10.1093/nar/gkac1228

By:

Clarke, Justin E;
Sabharwal, Kiran;
Kime, Louise;
McDowall, Kenneth J

Publication type:

Article

Structure-based investigations of the NAD<sup>+</sup>-II riboswitch.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 54, doi. 10.1093/nar/gkac1227

By:

Xu, Xiaochen;
Egger, Michaela;
Li, Chunyan;
Chen, Hao;
Micura, Ronald;
Ren, Aiming

Publication type:

Article

Mycobacterial helicase Lhr abets resistance to DNA crosslinking agents mitomycin C and cisplatin.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 218, doi. 10.1093/nar/gkac1222

By:

Warren, Garrett M;
Ejaz, Anam;
Fay, Allison;
Glickman, Michael S;
Shuman, Stewart

Publication type:

Article

Kinetics of elementary steps in loop-mediated isothermal amplification (LAMP) show that strand invasion during initiation is rate-limiting.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 488, doi. 10.1093/nar/gkac1221

By:

Dangerfield, Tyler L;
Paik, Inyup;
Bhadra, Sanchita;
Johnson, Kenneth A;
Ellington, Andrew D

Publication type:

Article

The ESKAPE mobilome contributes to the spread of antimicrobial resistance and CRISPR-mediated conflict between mobile genetic elements.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 236, doi. 10.1093/nar/gkac1220

By:

Botelho, João;
Cazares, Adrian;
Schulenburg, Hinrich

Publication type:

Article

Dissecting Trypanosoma brucei RRP44 function in the maturation of segmented ribosomal RNA using a regulated genetic complementation system.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 396, doi. 10.1093/nar/gkac1217

By:

Guerra-Slompo, Eloise Pavão;
Cesaro, Giovanna;
Guimarães, Beatriz Gomes;
Zanchin, Nilson Ivo Tonin

Publication type:

Article

Trypanosoma brucei RRP44: a versatile enzyme for processing structured and non-structured RNA substrates.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 380, doi. 10.1093/nar/gkac1199

By:

Cesaro, Giovanna;
da Soler, Heloisa Tramontin;
Guerra-Slompo, Eloise Pavão;
Haouz, Ahmed;
Legrand, Pierre;
Zanchin, Nilson Ivo Tonin;
Guimaraes, Beatriz Gomes

Publication type:

Article

DNA–protein cross-links between abasic DNA damage and mitochondrial transcription factor A (TFAM).

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 41, doi. 10.1093/nar/gkac1214

By:

Xu, Wenyan;
Tang, Jin;
Zhao, Linlin

Publication type:

Article

The interaction between transport-segment DNA and topoisomerase IA—crystal structure of MtbTOP1 in complex with both G- and T-segments.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 349, doi. 10.1093/nar/gkac1205

By:

Ferdous, Shomita;
Dasgupta, Tumpa;
Annamalai, Thirunavukkarasu;
Tan, Kemin;
Tse-Dinh, Yuk-Ching

Publication type:

Article

Genome-wide inference reveals that feedback regulations constrain promoter-dependent transcriptional burst kinetics.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 68, doi. 10.1093/nar/gkac1204

By:

Luo, Songhao;
Wang, Zihao;
Zhang, Zhenquan;
Zhou, Tianshou;
Zhang, Jiajun

Publication type:

Article

Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 420, doi. 10.1093/nar/gkac1202

By:

Fajkus, Petr;
Adámik, Matej;
Nelson, Andrew D L;
Kilar, Agata M;
Franek, Michal;
Bubeník, Michal;
Frydrychová, Radmila Čapková;
Votavová, Alena;
Sýkorová, Eva;
Fajkus, Jiří;
Peška, Vratislav

Publication type:

Article

Werner syndrome protein works as a dimer for unwinding and replication fork regression.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 337, doi. 10.1093/nar/gkac1200

By:

Shin, Soochul;
Hyun, Kwangbeom;
Lee, Jinwoo;
Joo, Dongwon;
Kulikowicz, Tomasz;
Bohr, Vilhelm A;
Kim, Jaehoon;
Hohng, Sungchul

Publication type:

Article

Characterization and acceleration of genome shuffling and ploidy reduction in synthetic allopolyploids by genome sequencing and editing.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 198, doi. 10.1093/nar/gkac1209

By:

Zhang, Xiaohui;
Zhang, Shuangshuang;
Liu, Zhongping;
Zhao, Wei;
Zhang, Xiaoxue;
Song, Jiangping;
Jia, Huixia;
Yang, Wenlong;
Ma, Yang;
Wang, Yang;
Xie, Kabin;
Budahn, Holger;
Wang, Haiping

Publication type:

Article

A versatile and convenient tool for regulation of DNA strand displacement and post-modification on pre-fabricated DNA nanodevices.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 29, doi. 10.1093/nar/gkac1193

By:

Liao, Yangwei;
Hu, Hao;
Tang, Xiaofeng;
Qin, Yang;
Zhang, Wei;
Dong, Kejun;
Yan, Bei;
Mu, Yaoqin;
Li, Longjie;
Ming, Zhihao;
Xiao, Xianjin

Publication type:

Article

DNA processing by the Kaposi's sarcoma-associated herpesvirus alkaline exonuclease SOX contributes to viral gene expression and infectious virion production.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 182, doi. 10.1093/nar/gkac1190

By:

Hartenian, Ella;
Mendez, Aaron S;
Didychuk, Allison L;
Khosla, Shivani;
Glaunsinger, Britt A

Publication type:

Article

RNA-guided DNA base damage repair via DNA polymerase-mediated nick translation.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 166, doi. 10.1093/nar/gkac1178

By:

Tsegay, Pawlos S;
Hernandez, Daniela;
Qu, Fei;
Olatunji, Mustapha;
Mamun, Yasir;
Chapagain, Prem;
Liu, Yuan

Publication type:

Article

Initiation at AUGUG and GUGUG sequences can lead to translation of overlapping reading frames in E. coli.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 271, doi. 10.1093/nar/gkac1175

By:

Kohl, Maximilian P;
Kompatscher, Maria;
Clementi, Nina;
Holl, Lena;
Erlacher, Matthias D

Publication type:

Article

Two modes of Cue2-mediated mRNA cleavage with distinct substrate recognition initiate no-go decay.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 1, p. 253, doi. 10.1093/nar/gkac1172

By:

Tomomatsu, Shota;
Watanabe, Atsuya;
Tesina, Petr;
Hashimoto, Satoshi;
Ikeuchi, Ken;
Li, Sihan;
Matsuo, Yoshitaka;
Beckmann, Roland;
Inada, Toshifumi

Publication type:

Article