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DNA binds to a specific site of the adhesive blood-protein von Willebrand factor guided by electrostatic interactions.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11812, doi. 10.1093/nar/gkaa988
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Retraction: AKAP12 mediates PKA-induced phosphorylation of ATR to enhance nucleotide excision repair.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11814, doi. 10.1093/nar/gkaa984
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Altered rRNA processing disrupts nuclear RNA homeostasis via competition for the poly(A)-binding protein Nab2.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11675, doi. 10.1093/nar/gkaa964
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Synthetic rewiring and boosting type I interferon responses for visualization and counteracting viral infections.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11799, doi. 10.1093/nar/gkaa961
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Acetylation-modulated communication between the H3 N-terminal tail domain and the intrinsically disordered H1 C-terminal domain.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11510, doi. 10.1093/nar/gkaa949
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Novel alternative ribonucleotide excision repair pathways in human cells by DDX3X and specialized DNA polymerases.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11551, doi. 10.1093/nar/gkaa948
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Complex DNA sequence readout mechanisms of the DNMT3B DNA methyltransferase.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11495, doi. 10.1093/nar/gkaa938
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Predicting single-cell gene expression profiles of imaging flow cytometry data with machine learning.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11335, doi. 10.1093/nar/gkaa926
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Discovery and development of novel DNA-PK inhibitors by targeting the unique Ku–DNA interaction.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11536, doi. 10.1093/nar/gkaa934
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Revisiting the organization of Polycomb-repressed domains: 3D chromatin models from Hi-C compared with super-resolution imaging.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11486, doi. 10.1093/nar/gkaa932
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Benchmarking and integrating genome-wide CRISPR off-target detection and prediction.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11370, doi. 10.1093/nar/gkaa930
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Determinants of correlated expression of transcription factors and their target genes.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11347, doi. 10.1093/nar/gkaa927
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Viral RNA recognition by LGP2 and MDA5, and activation of signaling through step-by-step conformational changes.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11664, doi. 10.1093/nar/gkaa935
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TPR is required for the efficient nuclear export of mRNAs and lncRNAs from short and intron-poor genes.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11645, doi. 10.1093/nar/gkaa919
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The immunorecognition, subcellular compartmentalization, and physicochemical properties of nucleic acid nanoparticles can be controlled by composition modification.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11785, doi. 10.1093/nar/gkaa908
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Prevalence of phase variable epigenetic invertons among host-associated bacteria.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11468, doi. 10.1093/nar/gkaa907
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Phosphorylation of Msx1 promotes cell proliferation through the Fgf9/18-MAPK signaling pathway during embryonic limb development.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11452, doi. 10.1093/nar/gkaa905
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Structural basis of Mfd-dependent transcription termination.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11762, doi. 10.1093/nar/gkaa904
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Flexizyme-aminoacylated shortened tRNAs demonstrate that only the aminoacylated acceptor arms of the two tRNA substrates are required for cyclodipeptide synthase activity.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11615, doi. 10.1093/nar/gkaa903
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EWS-FLI1 regulates and cooperates with core regulatory circuitry in Ewing sarcoma.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11434, doi. 10.1093/nar/gkaa901
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Importance of base-pair opening for mismatch recognition.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11322, doi. 10.1093/nar/gkaa896
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Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11750, doi. 10.1093/nar/gkaa893
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A novel assay provides insight into tRNA<sup>Phe</sup> retrograde nuclear import and re-export in S. cerevisiae.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11577, doi. 10.1093/nar/gkaa879
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Intrinsic DNA topology as a prioritization metric in genomic fine-mapping studies.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11304, doi. 10.1093/nar/gkaa877
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Function of a viral genome packaging motor from bacteriophage T4 is insensitive to DNA sequence.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11602, doi. 10.1093/nar/gkaa875
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NMR structure of a vestigial nuclease provides insight into the evolution of functional transitions in viral dsDNA packaging motors.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11737, doi. 10.1093/nar/gkaa874
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Characterization of distinct molecular interactions responsible for IRF3 and IRF7 phosphorylation and subsequent dimerization.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11421, doi. 10.1093/nar/gkaa873
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Statistical mechanics of chromosomes: in vivo and in silico approaches reveal high-level organization and structure arise exclusively through mechanical feedback between loop extruders and chromatin substrate properties.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11284, doi. 10.1093/nar/gkaa871
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BMPQ-1 binds selectively to (3+1) hybrid topologies in human telomeric G-quadruplex multimers.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11259, doi. 10.1093/nar/gkaa870
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Biophysical analysis of Pseudomonas-phage PaP3 small terminase suggests a mechanism for sequence-specific DNA-binding by lateral interdigitation.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11721, doi. 10.1093/nar/gkaa866
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Structural analysis of SARS-CoV-2 genome and predictions of the human interactome.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11270, doi. 10.1093/nar/gkaa864
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Inhibition of Plasmodium falciparum Lysyl-tRNA synthetase via an anaplastic lymphoma kinase inhibitor.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11566, doi. 10.1093/nar/gkaa862
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Mechanisms coordinating ribosomal protein gene transcription in response to stress.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11408, doi. 10.1093/nar/gkaa852
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Label-free profiling of DNA aptamer-small molecule binding using T5 exonuclease.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. e120, doi. 10.1093/nar/gkaa849
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Systematic use of synthetic 5′-UTR RNA structures to tune protein translation improves yield and quality of complex proteins in mammalian cell factories.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. e119, doi. 10.1093/nar/gkaa847
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Visualization of uracils created by APOBEC3A using UdgX shows colocalization with RPA at stalled replication forks.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. e118, doi. 10.1093/nar/gkaa845
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Cell cycle regulated DNA methyltransferase: fluorescent tracking of a DNA strand-separation mechanism and identification of the responsible protein motif.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11589, doi. 10.1093/nar/gkaa844
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DNA and RNA editing without sequence limitation using the flap endonuclease 1 guided by hairpin DNA probes.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. e117, doi. 10.1093/nar/gkaa843
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Conditional guide RNA through two intermediate hairpins for programmable CRISPR/Cas9 function: building regulatory connections between endogenous RNA expressions.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11773, doi. 10.1093/nar/gkaa842
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Structural basis of the XPB helicase–Bax1 nuclease complex interacting with the repair bubble DNA.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11695, doi. 10.1093/nar/gkaa801
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Detection of genomic G-quadruplexes in living cells using a small artificial protein.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11706, doi. 10.1093/nar/gkaa841
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A combinatorial method to isolate short ribozymes from complex ribozyme libraries.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. e116, doi. 10.1093/nar/gkaa834
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Efficient DNA double-strand break formation at single or multiple defined sites in the Saccharomyces cerevisiae genome.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. e115, doi. 10.1093/nar/gkaa833
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SINEUP long non-coding RNA acts via PTBP1 and HNRNPK to promote translational initiation assemblies.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11626, doi. 10.1093/nar/gkaa814
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Mechanisms of replication and repair in mitochondrial DNA deletion formation.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11244, doi. 10.1093/nar/gkaa804
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The role of ZFP57 and additional KRAB-zinc finger proteins in the maintenance of human imprinted methylation and multi-locus imprinting disturbances.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11394, doi. 10.1093/nar/gkaa837
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The involvement of nucleotide excision repair proteins in the removal of oxidative DNA damage.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11227, doi. 10.1093/nar/gkaa777
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Sperm histone H3 lysine 4 trimethylation is altered in a genetic mouse model of transgenerational epigenetic inheritance.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11380, doi. 10.1093/nar/gkaa712
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Alignment and quantification of ChIP-exo crosslinking patterns reveal the spatial organization of protein–DNA complexes.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11215, doi. 10.1093/nar/gkaa618
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State changes of the HORMA protein ASY1 are mediated by an interplay between its closure motif and PCH2.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11521, doi. 10.1093/nar/gkaa527
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