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Modern drug design: the implication of using artificial neuronal networks and multiple molecular dynamic simulations.
- Published in:
- Journal of Computer-Aided Molecular Design, 2018, v. 32, n. 1, p. 299, doi. 10.1007/s10822-017-0085-7
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- Publication type:
- Article
Establishing association between HLA‐C*04:01 and severe COVID‐19.
- Published in:
- HLA: Immune Response Genetics, 2024, v. 103, n. 1, p. 1, doi. 10.1111/tan.15355
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- Publication type:
- Article
Genome Destabilizing Mutator Alleles Drive Specific Mutational Trajectories in Saccharomyces cerevisiae.
- Published in:
- Genetics, 2014, v. 196, n. 2, p. 403, doi. 10.1534/genetics.113.159806
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- Publication type:
- Article
Allelic Ratios and the Mutational Landscape Reveal Biologically Significant Heterozygous SNVs.
- Published in:
- Genetics, 2012, v. 190, n. 4, p. 1225, doi. 10.1534/genetics.111.137208
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- Publication type:
- Article
Genome- wide detection of imprinted differentially methylated regions using nanopore sequencing.
- Published in:
- eLife, 2022, p. 1, doi. 10.7554/eLife.77898
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- Publication type:
- Article
Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure.
- Published in:
- Genome Biology & Evolution, 2020, v. 12, n. 7, p. 1174, doi. 10.1093/gbe/evaa108
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- Publication type:
- Article
Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation.
- Published in:
- Genome Biology & Evolution, 2016, v. 8, n. 1, p. 29, doi. 10.1093/gbe/evv244
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- Publication type:
- Article
Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics’ GemCode Sequencing Data.
- Published in:
- PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0163059
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- Publication type:
- Article
TMBur: a distributable tumor mutation burden approach for whole genome sequencing.
- Published in:
- BMC Medical Genomics, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s12920-022-01348-z
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- Publication type:
- Article
Insights into Conifer Giga-Genomes.
- Published in:
- Plant Physiology, 2014, v. 166, n. 4, p. 1724, doi. 10.1104/pp.114.248708
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- Publication type:
- Article
Combined serial analysis of gene expression and transcription factor binding site prediction identifies novel-candidate-target genes of Nr2e1 in neocortex development.
- Published in:
- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1770-3
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- Publication type:
- Article
Combined serial analysis of gene expression and transcription factor binding site prediction identifies novel-candidate-target genes of Nr2e1 in neocortex development
- Published in:
- BMC Genomics, 2015, v. 16, n. 1, p. 545, doi. 10.1186/s12864-015-1770-3
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- Publication type:
- Article
Automated Library Construction and Analysis for High-Throughput Nanopore Sequencing of SARS-CoV-2<sup> </sup>.
- Published in:
- Journal of Applied Laboratory Medicine, 2022, v. 7, n. 5, p. 1025, doi. 10.1093/jalm/jfac054
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- Publication type:
- Article
LIST-S2: taxonomy based sorting of deleterious missense mutations across species.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. W1, p. W154, doi. 10.1093/nar/gkaa288
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- Publication type:
- Article
ORegAnno 3.0: a community-driven resource for curated regulatory annotation.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 1, p. D126, doi. 10.1093/nar/gkv1203
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- Publication type:
- Article
Author Correction: MEG3 long noncoding RNA regulates the TGF-β pathway genes through formation of RNA–DNA triplex structures.
- Published in:
- 2019
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- Publication type:
- Correction Notice
MACHINE LEARNING IN PATHOLOGY: A PRIMER ON TECHNIQUES AND APPLICATIONS.
- Published in:
- Canadian Journal of Pathology, 2018, v. 10, n. 3, p. 51
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- Publication type:
- Article
Text-mining clinically relevant cancer biomarkers for curation into the CIViC database.
- Published in:
- Genome Medicine, 2019, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13073-019-0686-y
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- Publication type:
- Article
Non-coding-regulatory regions of human brain genes delineated by BAC knock-in mice.
- Published in:
- BMC Biology, 2013, v. 11, n. 1, p. 1, doi. 10.1186/1741-7007-11-106
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- Publication type:
- Article
Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags.
- Published in:
- BMC Biology, 2008, v. 6, p. 1, doi. 10.1186/1741-7007-6-30
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- Publication type:
- Article
Chemokine expression predicts T cell-inflammation and improved survival with checkpoint inhibition across solid cancers.
- Published in:
- NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00428-2
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- Publication type:
- Article
Chemokine expression predicts T cell-inflammation and improved survival with checkpoint inhibition across solid cancers.
- Published in:
- NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00428-2
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- Publication type:
- Article
Homologous recombination deficiency signatures in gastrointestinal and thoracic cancers correlate with platinum therapy duration.
- Published in:
- NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00368-x
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- Publication type:
- Article
A generalizable machine learning framework for classifying DNA repair defects using ctDNA exomes.
- Published in:
- NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00366-z
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- Publication type:
- Article
A p53 transcriptional signature in primary and metastatic cancers derived using machine learning.
- Published in:
- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.987238
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- Publication type:
- Article
The pink salmon genome: Uncovering the genomic consequences of a two-year life cycle.
- Published in:
- PLoS ONE, 2021, v. 16, n. 12, p. 1, doi. 10.1371/journal.pone.0255752
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- Publication type:
- Article
HoxA13 Regulates Phenotype Regionalization of Human Pregnant Myometrium.
- Published in:
- 2015
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- Publication type:
- journal article
MEN1 mutations in Hürthle cell (oncocytic) thyroid carcinoma.
- Published in:
- 2015
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- Publication type:
- journal article
A Computational Approach to Finding Novel Targets for Existing Drugs.
- Published in:
- PLoS Computational Biology, 2011, v. 7, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002139
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- Publication type:
- Article
A Survey of Genomic Properties for the Detection of Regulatory Polymorphisms.
- Published in:
- PLoS Computational Biology, 2007, v. 3, n. 6, p. e106, doi. 10.1371/journal.pcbi.0030106
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- Publication type:
- Article
RTNduals: an R/Bioconductor package for analysis of co-regulation and inference of dual regulons.
- Published in:
- Bioinformatics, 2019, v. 35, n. 24, p. 5357, doi. 10.1093/bioinformatics/btz534
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- Publication type:
- Article
ntEdit: scalable genome sequence polishing.
- Published in:
- Bioinformatics, 2019, v. 35, n. 21, p. 4430, doi. 10.1093/bioinformatics/btz400
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- Publication type:
- Article
ORCA: a comprehensive bioinformatics container environment for education and research.
- Published in:
- Bioinformatics, 2019, v. 35, n. 21, p. 4448, doi. 10.1093/bioinformatics/btz278
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- Publication type:
- Article
RTNsurvival: an R/Bioconductor package for regulatory network survival analysis.
- Published in:
- Bioinformatics, 2019, v. 35, n. 21, p. 4488, doi. 10.1093/bioinformatics/btz229
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- Publication type:
- Article
MAVIS: merging, annotation, validation, and illustration of structural variants.
- Published in:
- Bioinformatics, 2019, v. 35, n. 3, p. 515, doi. 10.1093/bioinformatics/bty621
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- Publication type:
- Article
A collaborative filtering-based approach to biomedical knowledge discovery.
- Published in:
- Bioinformatics, 2018, v. 34, n. 4, p. 652, doi. 10.1093/bioinformatics/btx613
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- Publication type:
- Article
ChAsE: chromatin analysis and exploration tool.
- Published in:
- Bioinformatics, 2016, v. 32, n. 21, p. 3324, doi. 10.1093/bioinformatics/btw382
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- Publication type:
- Article
Complex Autism Spectrum Disorder with Epilepsy, Strabismus and Self-Injurious Behaviors in a Patient with a De Novo Heterozygous POLR2A Variant.
- Published in:
- Genes, 2022, v. 13, n. 3, p. 470, doi. 10.3390/genes13030470
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- Publication type:
- Article
De Novo Sequencing, Assembly, and Annotation of Four Threespine Stickleback Genomes Based on Microfluidic Partitioned DNA Libraries.
- Published in:
- Genes, 2019, v. 10, n. 6, p. 426, doi. 10.3390/genes10060426
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- Publication type:
- Article
The Genome of the North American Brown Bear or Grizzly: Ursus arctos ssp. horribilis.
- Published in:
- Genes, 2018, v. 9, n. 12, p. 598, doi. 10.3390/genes9120598
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- Publication type:
- Article
Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02283-5
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- Publication type:
- Article
SNP discovery in black cottonwood ( Populus trichocarpa) by population transcriptome resequencing.
- Published in:
- Molecular Ecology Resources, 2011, v. 11, p. 81, doi. 10.1111/j.1755-0998.2010.02960.x
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- Publication type:
- Article
QUASI analysis of host immune responses to Gag polyproteins of human immunodeficiency virus type 1 by a systematic bioinformatics approach.
- Published in:
- Biochemistry & Cell Biology, 2010, v. 88, n. 4, p. 671, doi. 10.1139/O10-002
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- Publication type:
- Article
ALEA: a toolbox for allele-specific epigenomics analysis.
- Published in:
- Bioinformatics, 2014, v. 30, n. 8, p. 1172, doi. 10.1093/bioinformatics/btt744
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- Publication type:
- Article
Human variation database: an open-source database template for genomic discovery.
- Published in:
- Bioinformatics, 2011, v. 27, n. 8, p. 1155, doi. 10.1093/bioinformatics/btr100
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- Publication type:
- Article
High quality SNP calling using Illumina data at shallow coverage.
- Published in:
- Bioinformatics, 2010, v. 26, n. 8, p. 1029, doi. 10.1093/bioinformatics/btq092
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- Publication type:
- Article
De novo transcriptome assembly with ABySS.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2872, doi. 10.1093/bioinformatics/btp367
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- Publication type:
- Article
Slider—maximum use of probability information for alignment of short sequence reads and SNP detection.
- Published in:
- Bioinformatics, 2009, v. 25, n. 1, p. 6, doi. 10.1093/bioinformatics/btn565
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- Publication type:
- Article
FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology.
- Published in:
- Bioinformatics, 2008, v. 24, n. 15, p. 1729, doi. 10.1093/bioinformatics/btn305
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- Publication type:
- Article
Iron-regulated transcription and capsule formation in the fungal pathogenCryptococcus neoformans.
- Published in:
- Molecular Microbiology, 2005, v. 55, n. 5, p. 1452, doi. 10.1111/j.1365-2958.2004.04474.x
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- Publication type:
- Article