Results: 32
Differential regulation enrichment analysis via the integration of transcriptional regulatory network and gene expression data.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 563, doi. 10.1093/bioinformatics/btu672
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- Publication type:
- Article
Simple, rapid and accurate genotyping-by-sequencing from aligned whole genomes with ArrayMaker.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 599, doi. 10.1093/bioinformatics/btu691
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- Publication type:
- Article
LICRE: unsupervised feature correlation reduction for lipidomics.
- Published in:
- 2015
- By:
- Publication type:
- Correction Notice
IntSide: a web server for the chemical and biological examination of drug side effects.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 612, doi. 10.1093/bioinformatics/btu688
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- Publication type:
- Article
Introducing dAUTObase: a first step towards the global scale geoepidemiology of autoimmune syndromes and diseases.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 581, doi. 10.1093/bioinformatics/btu690
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- Publication type:
- Article
Inter-species pathway perturbation prediction via data-driven detection of functional homology.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 501, doi. 10.1093/bioinformatics/btu570
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- Publication type:
- Article
Message from the ISCB: ISCB Ebola award for important future research on the computational biology of Ebola virus.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 616, doi. 10.1093/bioinformatics/btv019
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- Publication type:
- Article
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 587, doi. 10.1093/bioinformatics/btu661
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- Publication type:
- Article
DIANA—algorithmic improvements for analysis of data-independent acquisition MS data.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 555, doi. 10.1093/bioinformatics/btu686
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- Publication type:
- Article
Accurate estimation of haplotype frequency from pooled sequencing data and cost-effective identification of rare haplotype carriers by overlapping pool sequencing.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 515, doi. 10.1093/bioinformatics/btu670
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- Publication type:
- Article
mimicMe: a web server for prediction and analysis of host-like proteins in microbial pathogens.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 590, doi. 10.1093/bioinformatics/btu681
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- Publication type:
- Article
flowDensity: reproducing manual gating of flow cytometry data by automated density-based cell population identification.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 606, doi. 10.1093/bioinformatics/btu677
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- Publication type:
- Article
DOSE: an R/Bioconductor package for disease ontology semantic and enrichment analysis.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 608, doi. 10.1093/bioinformatics/btu684
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- Publication type:
- Article
Understanding the limits of animal models as predictors of human biology: lessons learned from the sbv IMPROVER Species Translation Challenge.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 471, doi. 10.1093/bioinformatics/btu611
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- Publication type:
- Article
Statistical significance of variables driving systematic variation in high-dimensional data.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 545, doi. 10.1093/bioinformatics/btu674
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- Publication type:
- Article
Seed: a user-friendly tool for exploring and visualizing microbial community data.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 602, doi. 10.1093/bioinformatics/btu693
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- Publication type:
- Article
Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 462, doi. 10.1093/bioinformatics/btu490
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- Publication type:
- Article
piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 593, doi. 10.1093/bioinformatics/btu647
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- Publication type:
- Article
Comment on ‘protein–protein binding affinity prediction from amino acid sequence’.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 614, doi. 10.1093/bioinformatics/btu682
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- Publication type:
- Article
Where are we at regarding species translation? A review of the sbv IMPROVER challenge.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 451, doi. 10.1093/bioinformatics/btv065
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- Publication type:
- Article
A crowd-sourcing approach for the construction of species-specific cell signaling networks.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 484, doi. 10.1093/bioinformatics/btu659
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- Publication type:
- Article
MOST: a software environment for constraint-based metabolic modeling and strain design.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 610, doi. 10.1093/bioinformatics/btu685
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- Publication type:
- Article
jNMFMA: a joint non-negative matrix factorization meta-analysis of transcriptomics data.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 572, doi. 10.1093/bioinformatics/btu679
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- Publication type:
- Article
FuncPatch: a web server for the fast Bayesian inference of conserved functional patches in protein 3D structures.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 523, doi. 10.1093/bioinformatics/btu673
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- Publication type:
- Article
An efficient algorithm for the blocked pattern matching problem.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 532, doi. 10.1093/bioinformatics/btu678
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- Publication type:
- Article
LIGSIFT: an open-source tool for ligand structural alignment and virtual screening.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 539, doi. 10.1093/bioinformatics/btu692
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- Publication type:
- Article
SYSBIONS: nested sampling for systems biology.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 604, doi. 10.1093/bioinformatics/btu675
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- Publication type:
- Article
miRseqViewer: multi-panel visualization of sequence, structure and expression for analysis of microRNA sequencing data.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 596, doi. 10.1093/bioinformatics/btu676
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- Publication type:
- Article
Inter-species prediction of protein phosphorylation in the sbv IMPROVER species translation challenge.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 453, doi. 10.1093/bioinformatics/btu407
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- Publication type:
- Article
Inter-species inference of gene set enrichment in lung epithelial cells from proteomic and large transcriptomic datasets.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 492, doi. 10.1093/bioinformatics/btu569
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- Publication type:
- Article
E-MEM: efficient computation of maximal exact matches for very large genomes.
- Published in:
- Bioinformatics, 2015, v. 31, n. 4, p. 509, doi. 10.1093/bioinformatics/btu687
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- Publication type:
- Article
Deconvolving tumor purity and ploidy by integrating copy number alterations and loss of heterozygosity.
- Published in:
- 2015
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- Publication type:
- Correction Notice