Works matching IS 13674803 AND DT 2012 AND VI 28 AND IP 12
Results: 61
Automated gene-model curation using global discriminative learning.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1571, doi. 10.1093/bioinformatics/bts176
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Lineage-based identification of cellular states and expression programs.
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- Bioinformatics, 2012, v. 28, n. 12, p. i250, doi. 10.1093/bioinformatics/bts204
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A conditional neural fields model for protein threading.
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- Bioinformatics, 2012, v. 28, n. 12, p. i59, doi. 10.1093/bioinformatics/bts213
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NuST: analysis of the interplay between nucleoid organization and gene expression.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1643, doi. 10.1093/bioinformatics/bts201
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Xenome—a tool for classifying reads from xenograft samples.
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- Bioinformatics, 2012, v. 28, n. 12, p. i172, doi. 10.1093/bioinformatics/bts236
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Identifying disease sensitive and quantitative trait-relevant biomarkers from multidimensional heterogeneous imaging genetics data via sparse multimodal multitask learning.
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- Bioinformatics, 2012, v. 28, n. 12, p. i127
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A single source k-shortest paths algorithm to infer regulatory pathways in a gene network.
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- Bioinformatics, 2012, v. 28, n. 12, p. i49, doi. 10.1093/bioinformatics/bts212
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Ranking of multidimensional drug profiling data by fractional-adjusted bi-partitional scores.
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- Bioinformatics, 2012, v. 28, n. 12, p. i106, doi. 10.1093/bioinformatics/bts232
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GraphClust: alignment-free structural clustering of local RNA secondary structures.
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- Bioinformatics, 2012, v. 28, n. 12, p. i224, doi. 10.1093/bioinformatics/bts224
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Improved synapse detection for mGRASP-assisted brain connectivity mapping.
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- Bioinformatics, 2012, v. 28, n. 12, p. i25, doi. 10.1093/bioinformatics/bts221
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ISMB 2012 PROCEEDINGS PAPERS COMMITTEE.
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- Bioinformatics, 2012, v. 28, n. 12, p. i2, doi. 10.1093/bioinformatics/bts287
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- Article
Improving the TFold test for differential shotgun proteomics.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1652, doi. 10.1093/bioinformatics/bts247
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Novel domain combinations in proteins encoded by chimeric transcripts.
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- Bioinformatics, 2012, v. 28, n. 12, p. i67, doi. 10.1093/bioinformatics/bts216
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optiCall: a robust genotype-calling algorithm for rare, low-frequency and common variants.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1598, doi. 10.1093/bioinformatics/bts180
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Fast alignment of fragmentation trees.
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- Bioinformatics, 2012, v. 28, n. 12, p. i265, doi. 10.1093/bioinformatics/bts207
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ChemSpot: a hybrid system for chemical named entity recognition.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1633, doi. 10.1093/bioinformatics/bts183
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MMFPh: a maximal motif finder for phosphoproteomics datasets.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1562, doi. 10.1093/bioinformatics/bts195
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Leveraging input and output structures for joint mapping of epistatic and marginal eQTLs.
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- Bioinformatics, 2012, v. 28, n. 12, p. i137, doi. 10.1093/bioinformatics/bts227
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graph2tab, a library to convert experimental workflow graphs into tabular formats.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1665, doi. 10.1093/bioinformatics/bts258
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Estimating the order of mutations during tumorigenesis from tumor genome sequencing data.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1555, doi. 10.1093/bioinformatics/bts168
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Truncated branch and bound achieves efficient constraint-based genetic design.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1619, doi. 10.1093/bioinformatics/bts255
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Tachyon search speeds up retrieval of similar sequences by several orders of magnitude.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1645, doi. 10.1093/bioinformatics/bts197
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Data-driven integration of epidemiological and toxicological data to select candidate interacting genes and environmental factors in association with disease.
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- Bioinformatics, 2012, v. 28, n. 12, p. i121, doi. 10.1093/bioinformatics/bts229
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Weighted pooling—practical and cost-effective techniques for pooled high-throughput sequencing.
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- Bioinformatics, 2012, v. 28, n. 12, p. i197, doi. 10.1093/bioinformatics/bts208
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Stability of gene rankings from RNAi screens.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1612, doi. 10.1093/bioinformatics/bts192
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RFMapp: ribosome flow model application.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1663, doi. 10.1093/bioinformatics/bts185
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FindGeo: a tool for determining metal coordination geometry.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1658, doi. 10.1093/bioinformatics/bts246
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Editorial.
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- Bioinformatics, 2012, v. 28, n. 12, p. i1, doi. 10.1093/bioinformatics/bts281
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Extending ontologies by finding siblings using set expansion techniques.
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- Bioinformatics, 2012, v. 28, n. 12, p. i292, doi. 10.1093/bioinformatics/bts215
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Ranking viruses: measures of positional importance within networks define core viruses for rational polyvalent vaccine development.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1624, doi. 10.1093/bioinformatics/bts181
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Recognition models to predict DNA-binding specificities of homeodomain proteins.
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- Bioinformatics, 2012, v. 28, n. 12, p. i84, doi. 10.1093/bioinformatics/bts202
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AUTHOR INDEX.
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- Bioinformatics, 2012, v. 28, n. 12, p. i301, doi. 10.1093/bioinformatics/bts324
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Efficient algorithms for the reconciliation problem with gene duplication, horizontal transfer and loss.
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- Bioinformatics, 2012, v. 28, n. 12, p. i283, doi. 10.1093/bioinformatics/bts225
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Nonparametric Bayesian inference for perturbed and orthologous gene regulatory networks.
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- Bioinformatics, 2012, v. 28, n. 12, p. i233, doi. 10.1093/bioinformatics/bts222
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NOrMAL: accurate nucleosome positioning using a modified Gaussian mixture model.
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- Bioinformatics, 2012, v. 28, n. 12, p. i242, doi. 10.1093/bioinformatics/bts206
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Detection of allele-specific methylation through a generalized heterogeneous epigenome model.
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- Bioinformatics, 2012, v. 28, n. 12, p. i163, doi. 10.1093/bioinformatics/bts231
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DelPhi web server v2: incorporating atomic-style geometrical figures into the computational protocol.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1655, doi. 10.1093/bioinformatics/bts200
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How networks change with time.
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- Bioinformatics, 2012, v. 28, n. 12, p. i40, doi. 10.1093/bioinformatics/bts211
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Dissect: detection and characterization of novel structural alterations in transcribed sequences.
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- Bioinformatics, 2012, v. 28, n. 12, p. i179, doi. 10.1093/bioinformatics/bts214
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Protein subcellular location pattern classification in cellular images using latent discriminative models.
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- Bioinformatics, 2012, v. 28, n. 12, p. i32
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SEQuel: improving the accuracy of genome assemblies.
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- Bioinformatics, 2012, v. 28, n. 12, p. i188, doi. 10.1093/bioinformatics/bts219
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DecoyFinder: an easy-to-use python GUI application for building target-specific decoy sets.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1661, doi. 10.1093/bioinformatics/bts249
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On the calculation of signal transduction ability of signaling transduction pathways in intracellular communication: systematic approach.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1604, doi. 10.1093/bioinformatics/bts159
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PSI-Search: iterative HOE-reduced profile SSEARCH searching.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1650
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DACTAL: divide-and-conquer trees (almost) without alignments.
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- Bioinformatics, 2012, v. 28, n. 12, p. i274, doi. 10.1093/bioinformatics/bts218
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A hybrid approach to protein differential expression in mass spectrometry-based proteomics.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1586, doi. 10.1093/bioinformatics/bts193
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Incorporating prior information into association studies.
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- Bioinformatics, 2012, v. 28, n. 12, p. i147, doi. 10.1093/bioinformatics/bts235
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Utilizing RNA-Seq data for de novo coexpression network inference.
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- Bioinformatics, 2012, v. 28, n. 12, p. 1592, doi. 10.1093/bioinformatics/bts245
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DELISHUS: an efficient and exact algorithm for genome-wide detection of deletion polymorphism in autism.
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- Bioinformatics, 2012, v. 28, n. 12, p. i154, doi. 10.1093/bioinformatics/bts234
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Statistical model-based testing to evaluate the recurrence of genomic aberrations.
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- Bioinformatics, 2012, v. 28, n. 12, p. i115, doi. 10.1093/bioinformatics/bts203
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