Works matching DE "IMMUNOINFORMATICS"

Results: 122

Development of a Multiepitope Vaccine Against SARS-CoV-2: Immunoinformatics Study.

Published in:

JMIR Bioinformatics & Biotechnology, 2022, v. 3, n. 1, p. 1, doi. 10.2196/36100

By:

Ghafouri, Fatemeh;
Cohan, Reza Ahangari;
Samimi, Hilda;
Rad S. M., Ali Hosseini;
Naderi, Mahmood;
Noorbakhsh, Farshid;
Haghpanah, Vahid

Publication type:

Article

The lure of reviews.

Published in:: Nature Immunology, 2011, v. 12, n. 10, p. 915, doi. 10.1038/ni.2122
Publication type:: Article

From In silico Protein Epitope Density Prediction to Testing Escherichia coli O157:H7 Vaccine Candidates in a Murine Model of Colonization.

Published in:

Frontiers in Cellular & Infection Microbiology, 2016, v. 6, p. 1, doi. 10.3389/fcimb.2016.00094

By:

Tapia, Daniel;
Ross, Brittany N.;
Kalita, Anjana;
Kalita, Mridul;
Hatcher, Christopher L.;
Muruato, Laura A.;
Torres, Alfredo G.

Publication type:

Article

LAMARCKIAN LEARNING IN CLONAL SELECTION ALGORITHM FOR NUMERICAL OPTIMIZATION.

Published in:

International Journal on Artificial Intelligence Tools, 2010, v. 19, n. 1, p. 19, doi. 10.1142/S0218213010000029

By:

GONG, MAOGUO;
JIAO, LICHENG;
YANG, JIE;
LIU, FANG

Publication type:

Article

mACPpred: A Support Vector Machine-Based Meta-Predictor for Identification of Anticancer Peptides.

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 8, p. 1964, doi. 10.3390/ijms20081964

By:

Boopathi, Vinothini;
Subramaniyam, Sathiyamoorthy;
Malik, Adeel;
Lee, Gwang;
Manavalan, Balachandran;
Yang, Deok-Chun

Publication type:

Article

Immunoinformatics Features Linked to Leishmania Vaccine Development: Data Integration of Experimental and In Silico Studies.

Published in:

International Journal of Molecular Sciences, 2017, v. 18, n. 2, p. 371, doi. 10.3390/ijms18020371

By:

Brito, Rory C. F.;
Guimarães, Frederico G.;
Velloso, João P. L.;
Corrêa-Oliveira, Rodrigo;
Ruiz, Jeronimo C.;
Reis, Alexandre B.;
Resende, Daniela M.

Publication type:

Article

SVRMHC prediction server for MHC-binding peptides.

Published in:

BMC Bioinformatics, 2006, v. 7, p. 463, doi. 10.1186/1471-2105-7-463

By:

Ji Wan;
Wen Liu;
Qiqi Xu;
Yongliang Ren;
Flower, Darren R;
Tongbin Li

Publication type:

Article

Spatial and Functional Heterogeneities Shape Collective Behavior of Tumor-Immune Networks.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 4, p. 1, doi. 10.1371/journal.pcbi.1004181

By:

Wells, Daniel K.;
Chuang, Yishan;
Knapp, Louis M.;
Brockmann, Dirk;
Kath, William L.;
Leonard, Joshua N.

Publication type:

Article

The Biocurator: Connecting and Enhancing Scientific Data.

Published in:

PLoS Computational Biology, 2006, v. 2, n. 10, p. 1190, doi. 10.1371/journal.pcbi.0020125

By:

Salimi, Nima;
Vita, Randi

Publication type:

Article

Biocurators: Contributors to the World of Science.

Published in:

PLoS Computational Biology, 2006, v. 2, n. 10, p. 1185, doi. 10.1371/journal.pcbi.0020142

By:

Bourne, Philip E.;
McEntyre, Johanna

Publication type:

Article

Immunoinformatics Comes of Age.

Published in:

PLoS Computational Biology, 2006, v. 2, n. 6, p. e71, doi. 10.1371/journal.pcbi.0020071

By:

Korber, Bette;
LaBute, Montiago;
Yusim, Karina

Publication type:

Article

Transcriptional programming of human macrophages: on the way to systems immunology.

Published in:

Journal of Molecular Medicine, 2015, v. 93, n. 6, p. 589, doi. 10.1007/s00109-015-1286-y

By:

Schultze, Joachim

Publication type:

Article

Immunological evaluation of predicted linear B-cell epitopes of human CD20 antigen.

Published in:

Biotechnology & Applied Biochemistry, 2012, v. 59, n. 3, p. 186, doi. 10.1002/bab.1012

By:

Anbouhi, Mahdi Habibi;
Abolhassani, Mohsen;
Bouzari, Saeid;
Khanahmad, Hossein;
Aghasadeghi, Mohammad Reza;
Madadkar-Sobhani, Armin;
Amanzadeh, Amir;
Behdani, Mahdi;
Shokrgozar, Mohammad Ali

Publication type:

Article

Immunogenicity assessment of antileukemic agent glutaminase from Escherichia coli, Pseudomonas sp., and Bacillus sp.

Published in:

Biomedical & Biotechnology Research Journal, 2022, v. 6, n. 1, p. 138, doi. 10.4103/bbrj.bbrj_136_21

By:

Parmar, Jyotsna;
Tripathi, Shikha;
Kumar, Awanish

Publication type:

Article

CHALLENGES AND OPPORTUNITIES IN THE ICT SECTOR DURING AND POST-COVID-19 PANDEMIC.

Published in:

Horizons Series B, 2021, n. 9, p. 29, doi. 10.20544/HORIZONS.B.09.2.P03

By:

Ristevski, Blagoj;
Jolevski, Ilija;
Savoska, Snezana;
Blazheska-Tabakovska, Natasha;
Bogdanoska-Jovanovska, Mimoza

Publication type:

Article

Prediction of MAYV peptide antigens for immunodiagnostic tests by immunoinformatics and molecular dynamics simulations.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-50008-3

By:

Rodrigues, Roger Luiz;
Menezes, Gabriela De Lima;
Saivish, Marielena Vogel;
Costa, Vivaldo Gomes Da;
Pereira, Maristela;
Moreli, Marcos Lázaro;
Silva, Roosevelt Alves Da

Publication type:

Article

Immunoinformatics approaches to explore Helicobacter Pylori proteome (Virulence Factors) to design B and T cell multi-epitope subunit vaccine.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-49354-z

By:

Khan, Mazhar;
Khan, Shahzeb;
Ali, Asim;
Akbar, Hameed;
Sayaf, Abrar Mohammad;
Khan, Abbas;
Wei, Dong-Qing

Publication type:

Article

Analysis of Promiscuous T cell Epitopes for Vaccine Development Against West Nile Virus Using Bioinformatics Approaches.

Published in:

International Journal of Peptide Research & Therapeutics, 2018, v. 24, n. 3, p. 377, doi. 10.1007/s10989-017-9624-2

By:

Sharma, Pawan;
Sharma, Priti;
Mishra, Sanjay;
Kumar, Ajay

Publication type:

Article

Immunoinformatic Identification of Potential Epitopes Against Shigellosis.

Published in:

International Journal of Peptide Research & Therapeutics, 2016, v. 22, n. 4, p. 481, doi. 10.1007/s10989-016-9528-6

By:

Sharma, Drashya;
Patel, Shivangi;
Padh, Harish;
Desai, Priti

Publication type:

Article

Porcine parvovirus VP1/VP2 on a time series epitope mapping: exploring the effects of high hydrostatic pressure on the immune recognition of antigens.

Published in:

Virology Journal, 2019, v. 16, n. 1, p. N.PAG, doi. 10.1186/s12985-019-1165-1

By:

de Souza, Ancelmo Rabelo;
Yamin, Marriam;
Gava, Danielle;
Zanella, Janice Reis Ciacci;
Gatti, Maria Sílvia Viccari;
Bonafe, Carlos Francisco Sampaio;
de Lima Neto, Daniel Ferreira

Publication type:

Article

FRED 2: an immunoinformatics framework for Python.

Published in:

Bioinformatics, 2016, v. 32, n. 13, p. 2044, doi. 10.1093/bioinformatics/btw113

By:

Schubert, Benjamin;
Walzer, Mathias;
Brachvogel, Hans-Philipp;
Szolek, András;
Mohr, Christopher;
Kohlbacher, Oliver

Publication type:

Article

Shaping the interaction landscape of bioactive molecules.

Published in:

Bioinformatics, 2013, v. 29, n. 23, p. 3073, doi. 10.1093/bioinformatics/btt540

By:

Gfeller, David;
Michielin, Olivier;
Zoete, Vincent

Publication type:

Article

Immune system simulation online.

Published in:

Bioinformatics, 2011, v. 27, n. 14, p. 2013, doi. 10.1093/bioinformatics/btr335

By:

Rapin, Nicolas;
Lund, Ole;
Castiglione, Filippo

Publication type:

Article

A Novel design of multi-epitope based vaccine against Escherichia coli.

Published in:

Microbes & Infectious Diseases, 2022, v. 3, n. 2, p. 407, doi. 10.21608/MID.2021.55310.1101

By:

O. M., Adeoti;
A. O., Jimoh;
A. V., Akinsooto;
A. K., Agboluaje;
A. O., Aderinto;
T. A., Sanusi;
D. A., Adesina;
K. A., Komolafe;
O. J., Olaoye

Publication type:

Article

CTLs' repertoire shaping in the thymus: A Monte Carlo simulation.

Published in:

Autoimmunity, 2011, v. 44, n. 4, p. 261, doi. 10.3109/08916934.2011.523272

By:

Castiglione, F.;
Santoni, D.;
Rapin, N.

Publication type:

Article

Next generation sequencing: a short comparison<sup>1</sup>.

Published in:

Journal of Laboratory Medicine / Laboratoriums Medizin, 2009, v. 33, n. 5, p. 1, doi. 10.1515/JLM.2009.044et

By:

Stangier, Kerstin A.

Publication type:

Article

Genome-wide identification of novel vaccine candidates for Plasmodium falciparum malaria using integrative bioinformatics approaches.

Published in:

3 Biotech, 2017, v. 7, n. 5, p. 1, doi. 10.1007/s13205-017-0947-7

By:

Singh, Satarudra;
Srivastava, Deeksha;
Mishra, Bhartendu

Publication type:

Article

Computer-aided vaccine design: a brief report.

Published in:

Tehran University Medical Journal, 2012, v. 70, n. 6, p. 383

By:

Khorasgani, Razieh Ghasemi;
Sanaei, Marzieh;
Beigi, Majid Mohammad

Publication type:

Article

BOOK REVIEWS: 14.

Published in:

2005

By:

Zimmermann, Karl-Heinz

Publication type:

Book Review

Envelope protein gene based molecular characterization of Japanese encephalitis virus clinical isolates from West Bengal, India: a comparative approach with respect to SA14-14-2 live attenuated vaccine strain.

Published in:

BMC Infectious Diseases, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2334-13-368

By:

Sarkar, Arindam;
Banik, Avishek;
Pathak, Bani K.;
Mukhopadhyay, Subhra K.;
Chatterjee, Shyamalendu

Publication type:

Article

Antibody technology in proteomics.

Published in:

Briefings in Functional Genomics & Proteomics, 2008, v. 7, n. 4, p. 275, doi. 10.1093/bfgp/eln028

By:

Saerens, Dirk;
Hassanzadeh, Gholamreza;
Muyldermans, Ghassabeh;
Muyldermans, Serge

Publication type:

Article

In Silico Identification and in Vitro Analysis of B and T-Cell Epitopes of the Black Turtle Bean (Phaseolus Vulgaris L.) Lectin.

Published in:

Cellular Physiology & Biochemistry (Karger AG), 2018, v. 49, n. 4, p. 1600, doi. 10.1159/000493496

By:

Shudong He;
Jinlong Zhao;
Elfalleh, Walid;
Jemaà, Mohamed;
Hanju Sun;
Xianbao Sun;
Mingming Tang;
Qian He;
Zeyu Wu;
Florian Lang

Publication type:

Article

EpiTOP—a proteochemometric tool for MHC class II binding prediction.

Published in:

Bioinformatics, 2010, v. 26, n. 16, p. 2066, doi. 10.1093/bioinformatics/btq324

By:

Dimitrov, Ivan;
Garnev, Panayot;
Flower, Darren R.;
Doytchinova, Irini

Publication type:

Article

FRED—a framework for T-cell epitope detection.

Published in:

Bioinformatics, 2009, v. 25, n. 20, p. 2758, doi. 10.1093/bioinformatics/btp409

By:

Feldhahn, Magdalena;
Donnes, Pierre;
Thiel, Philipp;
Kohlbacher, Oliver

Publication type:

Article

Multi-RELIEF: a method to recognize specificity determining residues from multiple sequence alignments using a Machine-Learning approach for feature weighting.

Published in:

Bioinformatics, 2008, v. 24, n. 1, p. 18, doi. 10.1093/bioinformatics/btm537

By:

Kai Ye;
K. Anton Feenstra;
Jaap Heringa;
Adriaan P. IJzerman;
Elena Marchiori

Publication type:

Article

In-silico Analysis of Pneumococcal Heat-Shock Protein (DnaJ) to Predict Novel Multi-Epitope Vaccine Candidates.

Published in:

Vaccine Research, 2021, v. 8, n. 2, p. 65, doi. 10.52547/vacres.8.2.65

By:

Afshari, Elnaz;
Cohan, Reza Ahangari;
Sotoodehnejadnematalahi, Fattah;
Mousavi, Seyed Fazlollah

Publication type:

Article

Identification and cloning of highly epitopic regions of Clostridium novyi alpha toxin.

Published in:

Turkish Journal of Biology, 2016, v. 40, n. 6, p. 1219, doi. 10.3906/biy-1507-121

By:

GORD-NOSHAHRI, Najme;
NAJAFI, Mohsen Fathi;
MAKHDOUMI, Ali;
MAJIDI, Behjat;
MEHRVARZ, Mohsen

Publication type:

Article

The Pipeline Repertoire for Ig-Seq Analysis.

Published in:

Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00899

By:

López-Santibáñez-Jácome, Laura;
Avendaño-Vázquez, S. Eréndira;
Flores-Jasso, Carlos Fabián

Publication type:

Article

Immunogenicity and Protective Efficacy of T-Cell Epitopes Derived From Potential Th1 Stimulatory Proteins of Leishmania (Leishmania) donovani.

Published in:

Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00288

By:

Joshi, Sumit;
Yadav, Narendra Kumar;
Rawat, Keerti;
Kumar, Vikash;
Ali, Rafat;
Sahasrabuddhe, Amogh Anant;
Siddiqi, Mohammad Imran;
Haq, Wahajul;
Sundar, Shyam;
Dube, Anuradha

Publication type:

Article

Is <italic>PLOS ONE</italic> Attracting Highly Cited Papers in the Food Sciences? Comparing Authors' Most Cited Work to Their <italic>PLOS ONE</italic> Articles Published 2006-2016.

Published in:

Journal of Agricultural & Food Information, 2018, v. 19, n. 1, p. 97, doi. 10.1080/10496505.2017.1363653

By:

Stankus, Tony

Publication type:

Article

Selecting targets for the diagnosis of Schistosoma mansoni infection: An integrative approach using multi-omic and immunoinformatics data.

Published in:

PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0182299

By:

Carvalho, Gardenia B. F.;
Resende, Daniela M.;
Siqueira, Liliane M. V.;
Lopes, Marcelo D.;
Lopes, Débora O.;
Coelho, Paulo Marcos Z.;
Teixeira-Carvalho, Andréa;
Ruiz, Jeronimo C.;
Fonseca, Cristina T.

Publication type:

Article

In Vivo Validation of Predicted and Conserved T Cell Epitopes in a Swine Influenza Model.

Published in:

PLoS ONE, 2016, v. 11, n. 7, p. 1, doi. 10.1371/journal.pone.0159237

By:

Gutiérrez, Andres H.;
Loving, Crystal;
Moise, Leonard;
Terry, Frances E.;
Brockmeier, Susan L.;
Hughes, Holly R.;
Martin, William D.;
De Groot, Anne S.

Publication type:

Article

In silico epitope mapping and experimental evaluation of the Merozoite Adhesive Erythrocytic Binding Protein (MAEBL) as a malaria vaccine candidate.

Published in:

Malaria Journal, 2018, v. 17, p. 1, doi. 10.1186/s12936-017-2144-x

By:

Cravo, Pedro;
Machado, Renato B.;
Leite, Juliana A.;
Leda, Taizy;
Suwanarusk, Rossarin;
Bittencourt, Najara;
Albrecht, Letusa;
Judice, Carla;
Lopes, Stefanie C. P.;
Lacerda, Marcus V. G.;
Ferreira, Marcelo U.;
Soares, Irene S.;
Goh, Yun Shan;
Bargieri, Daniel Y.;
Nosten, François;
Russell, Bruce;
Rénia, Laurent;
Costa, Fabio T. M.

Publication type:

Article

Exploitation of reverse vaccinology and immunoinformatics as promising platform for genome-wide screening of new effective vaccine candidates against Plasmodium falciparum.

Published in:

BMC Bioinformatics, 2019, v. 19, n. 13, p. 219, doi. 10.1186/s12859-018-2482-x

By:

Pritam, Manisha;
Singh, Garima;
Swaroop, Suchit;
Singh, Akhilesh Kumar;
Singh, Satarudra Prakash

Publication type:

Article

Use of Integrated Core Proteomics, Immuno-Informatics, and In Silico Approaches to Design a Multiepitope Vaccine against Zoonotic Pathogen Edwardsiella tarda.

Published in:

Applied Microbiology (2673-8007), 2022, v. 2, n. 2, p. 414, doi. 10.3390/applmicrobiol2020031

By:

Islam, Sk Injamamul;
Mahfuj, Sarower;
Islam, Md Jakiul;
Mou, Moslema Jahan;
Sanjida, Saloa

Publication type:

Article

Advances in Computational Immunology.

Published in:

2015

By:

Pappalardo, Francesco;
Brusic, Vladimir;
Pennisi, Marzio;
Zhang, Guanglan

Publication type:

Editorial

EPIPOX: Immunoinformatic Characterization of the Shared T-Cell Epitome between Variola Virus and Related Pathogenic Orthopoxviruses.

Published in:

Journal of Immunology Research, 2015, p. 1, doi. 10.1155/2015/738020

By:

Molero-Abraham, Magdalena;
Glutting, John-Paul;
Flower, Darren R.;
Lafuente, Esther M.;
Reche, Pedro A.

Publication type:

Article

ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization.

Published in:

Briefings in Bioinformatics, 2009, v. 10, n. 3, p. 330, doi. 10.1093/bib/bbp014

By:

Pappalardo, Francesco;
Hailing-Brown, Mark D.;
Rapin, Nicolas;
Zhang, Ping;
Aleman, Davide;
Emerson, Andrew;
Paci, Paola;
Duroux, Patrice;
Pennisi, Marzio;
Palladini, Arianna;
Miotto, Olivo;
Churchill, Daniel;
Rossi, Elda;
Shepherd, Adrian J.;
Moss, David S.;
Castigiione, Filippo;
Bernaschi, Massimo;
Lefranc, Marie-Pauie;
Brunak, Søren;
Motta, Santo

Publication type:

Article

Recent developments in the MAFFT multiple sequence alignment program.

Published in:

Briefings in Bioinformatics, 2008, v. 9, n. 4, p. 286, doi. 10.1093/bib/bbn013

By:

Katoh, Kazutaka;
Toh, Hiroyuki

Publication type:

Article

The growth of bioinformatics.

Published in:

Briefings in Bioinformatics, 2007, v. 8, n. 2, p. 69

By:

Brusic, Vladimir

Publication type:

Article