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Big data, but are we ready?
- Published in:
- 2011
- By:
- Publication type:
- Letter
Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis.
- Published in:
- Data Science & Engineering, 2017, v. 2, n. 3, p. 232, doi. 10.1007/s41019-017-0050-4
- By:
- Publication type:
- Article
A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar.
- Published in:
- PLoS Computational Biology, 2022, v. 18, n. 5, p. 1, doi. 10.1371/journal.pcbi.1009123
- By:
- Publication type:
- Article
Transcriptional and Linkage Analyses Identify Loci that Mediate the Differential Macrophage Response to Inflammatory Stimuli and Infection.
- Published in:
- PLoS Genetics, 2015, v. 11, n. 10, p. 1, doi. 10.1371/journal.pgen.1005619
- By:
- Publication type:
- Article
Mapping Determinants of Gene Expression Plasticity by Genetical Genomics in C. elegans.
- Published in:
- PLoS Genetics, 2006, v. 3, n. 6, p. 2155, doi. 10.1371/journal.pgen.0020222
- By:
- Publication type:
- Article
Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics.
- Published in:
- Bioinformatics, 2012, v. 28, n. 7, p. 1035, doi. 10.1093/bioinformatics/bts080
- By:
- Publication type:
- Article
xQTL workbench: a scalable web environment for multi-level QTL analysis.
- Published in:
- Bioinformatics, 2012, v. 28, n. 7, p. 1042, doi. 10.1093/bioinformatics/bts049
- By:
- Publication type:
- Article
R/qtl: high-throughput multiple QTL mapping.
- Published in:
- Bioinformatics, 2010, v. 26, n. 23, p. 2990, doi. 10.1093/bioinformatics/btq565
- By:
- Publication type:
- Article
BioRuby: bioinformatics software for the Ruby programming language.
- Published in:
- Bioinformatics, 2010, v. 26, n. 20, p. 2617, doi. 10.1093/bioinformatics/btq475
- By:
- Publication type:
- Article
Toward effective software solutions for big biology.
- Published in:
- Nature Biotechnology, 2015, v. 33, n. 7, p. 686, doi. 10.1038/nbt.3240
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- Publication type:
- Article
Ara QTL - workbench and archive for systems genetics in Arabidopsis thaliana.
- Published in:
- Plant Journal, 2017, v. 89, n. 6, p. 1225, doi. 10.1111/tpj.13457
- By:
- Publication type:
- Article
Private Genomes and Public SNPs: Homomorphic Encryption of Genotypes and Phenotypes for Shared Quantitative Genetics.
- Published in:
- Genetics, 2020, v. 215, n. 2, p. 359, doi. 10.1534/genetics.120.303153
- By:
- Publication type:
- Article
R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent Populations.
- Published in:
- Genetics, 2019, v. 211, n. 2, p. 495, doi. 10.1534/genetics.118.301595
- By:
- Publication type:
- Article
Community-driven development for computational biology at Sprints, Hackathons and Codefests.
- Published in:
- BMC Bioinformatics, 2014, v. 15, n. Suppl 14, p. 1, doi. 10.1186/1471-2105-15-S14-S7
- By:
- Publication type:
- Article
Ten simple rules to run a successful BioHackathon.
- Published in:
- 2020
- By:
- Publication type:
- Editorial
Bioinformatics tools and database resources for systems genetics analysis in mice—a short review and an evaluation of future needs.
- Published in:
- Briefings in Bioinformatics, 2012, v. 13, n. 2, p. 135, doi. 10.1093/bib/bbr026
- By:
- Publication type:
- Article
Pangenome graphs in infectious disease: a comprehensive genetic variation analysis of Neisseria meningitidis leveraging Oxford Nanopore long reads.
- Published in:
- Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1225248
- By:
- Publication type:
- Article
A genome-wide genetic map of NB-LRR disease resistance loci in potato.
- Published in:
- Theoretical & Applied Genetics, 2011, v. 123, n. 3, p. 493, doi. 10.1007/s00122-011-1602-z
- By:
- Publication type:
- Article
Highlights from the Era of Open Source Web-Based Tools.
- Published in:
- Journal of Neuroscience, 2021, v. 41, n. 5, p. 927, doi. 10.1523/JNEUROSCI.1657-20.2020
- By:
- Publication type:
- Article
Genetic Contribution to Initial and Progressive Alcohol Intake Among Recombinant Inbred Strains of Mice.
- Published in:
- Frontiers in Genetics, 2018, p. N.PAG, doi. 10.3389/fgene.2018.00370
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- Publication type:
- Article
Fast probabilistic file fingerprinting for big data.
- Published in:
- BMC Genomics, 2013, v. 14, n. Suppl 2, p. 1, doi. 10.1186/1471-2164-14-S2-S8
- By:
- Publication type:
- Article
Cluster-efficient pangenome graph construction with nf-core/pangenome.
- Published in:
- Bioinformatics, 2024, v. 40, n. 11, p. 1, doi. 10.1093/bioinformatics/btae609
- By:
- Publication type:
- Article
Pangenome graph layout by Path-Guided Stochastic Gradient Descent.
- Published in:
- Bioinformatics, 2024, v. 40, n. 7, p. 1, doi. 10.1093/bioinformatics/btae363
- By:
- Publication type:
- Article
ODGI: understanding pangenome graphs.
- Published in:
- Bioinformatics, 2022, v. 38, n. 13, p. 3319, doi. 10.1093/bioinformatics/btac308
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- Publication type:
- Article
Sambamba: fast processing of NGS alignment formats.
- Published in:
- Bioinformatics, 2015, v. 31, n. 12, p. 2032, doi. 10.1093/bioinformatics/btv098
- By:
- Publication type:
- Article
The root‐knot nematode effector MiMSP32 targets host 12‐oxophytodienoate reductase 2 to regulate plant susceptibility.
- Published in:
- New Phytologist, 2023, v. 237, n. 6, p. 2360, doi. 10.1111/nph.18653
- By:
- Publication type:
- Article
Genetic Modulation of Initial Sensitivity to Δ9-Tetrahydrocannabinol (THC) Among the BXD Family of Mice.
- Published in:
- Frontiers in Genetics, 2021, v. 12, p. 1, doi. 10.3389/fgene.2021.659012
- By:
- Publication type:
- Article
GeneCup: mining PubMed and GWAS catalog for gene--keyword relationships.
- Published in:
- G3: Genes | Genomes | Genetics, 2022, v. 12, n. 5, p. 1, doi. 10.1093/g3journal/jkac059
- By:
- Publication type:
- Article
Speeding up eQTL scans in the BXD population using GPUs.
- Published in:
- G3: Genes | Genomes | Genetics, 2021, v. 11, n. 12, p. 1, doi. 10.1093/g3journal/jkab254
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- Publication type:
- Article