Works matching IS 13674803 AND DT 2023 AND VI 39 AND IP 3
Results: 44
GENLIB: new function to simulate haplotype transmission in large complex genealogies.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad136
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- Article
Correction to: Improving annotation propagation on molecular networks through random walks: introducing ChemWalker.
- Published in:
- 2023
- Publication type:
- Correction Notice
DeepOM: single-molecule optical genome mapping via deep learning.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad137
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- Article
PATO: genome-wide prediction of lncRNA–DNA triple helices.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad134
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- Article
sBGC-hm: an atlas of secondary metabolite biosynthetic gene clusters from the human gut microbiome.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad131
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- Article
Correction to: SVJedi: genotyping structural variations with long reads.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad129
- Publication type:
- Article
vaRHC: an R package for semi-automation of variant classification in hereditary cancer genes according to ACMG/AMP and gene-specific ClinGen guidelines.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad128
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- Article
SLEMM: million-scale genomic predictions with window-based SNP weighting.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad127
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- Article
Coverage-preserving sparsification of overlap graphs for long-read assembly.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad124
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- Article
CFAGO: cross-fusion of network and attributes based on attention mechanism for protein function prediction.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad123
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- Article
Accurate and efficient protein sequence design through learning concise local environment of residues.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad122
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- Publication type:
- Article
NGenomeSyn: an easy-to-use and flexible tool for publication-ready visualization of syntenic relationships across multiple genomes.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad121
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- Article
PhaGAA: an integrated web server platform for phage genome annotation and analysis.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad120
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- Article
genomepy: genes and genomes at your fingertips.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad119
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- Publication type:
- Article
NDEx IQuery: a multi-method network gene set analysis leveraging the Network Data Exchange.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad118
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- Article
Correction to: SBbadger: biochemical reaction networks with definable degree distributions.
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- 2023
- Publication type:
- Correction Notice
TopEnzyme: a framework and database for structural coverage of the functional enzyme space.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad116
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- Article
linemodels: clustering effects based on linear relationships.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad115
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- Article
Targeting tumor heterogeneity: multiplex-detection-based multiple instance learning for whole slide image classification.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad114
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- Article
peaks2utr: a robust Python tool for the annotation of 3′ UTRs.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad112
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- Publication type:
- Article
RSCanner: rapid assessment and visualization of RNA structure content.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad111
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- Publication type:
- Article
bvnGPS: a generalizable diagnostic model for acute bacterial and viral infection using integrative host transcriptomics and pretrained neural networks.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad109
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- Article
ExamPle: explainable deep learning framework for the prediction of plant small secreted peptides.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad108
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- Publication type:
- Article
Correction to: Benchmarking the empirical accuracy of short-read sequencing across the M. tuberculosis genome.
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- 2023
- Publication type:
- Correction Notice
Correction to: On the feasibility of deep learning applications using raw mass spectrometry data.
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- 2023
- Publication type:
- Correction Notice
MeganServer: facilitating interactive access to metagenomic data on a server.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad105
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- Article
Haptools: a toolkit for admixture and haplotype analysis.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad104
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- Article
On the effectiveness of compact biomedical transformers.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad103
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- Article
SMITH: spatially constrained stochastic model for simulation of intra-tumour heterogeneity.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad102
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- Article
MetaProFi: an ultrafast chunked Bloom filter for storing and querying protein and nucleotide sequence data for accurate identification of functionally relevant genetic variants.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad101
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- Article
StonPy: a tool to parse and query collections of SBGN maps in a graph database.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad100
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- Article
CLAIRE: contrastive learning-based batch correction framework for better balance between batch mixing and preservation of cellular heterogeneity.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad099
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- Publication type:
- Article
scGCL: an imputation method for scRNA-seq data based on graph contrastive learning.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad098
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- Article
AGC: compact representation of assembled genomes with fast queries and updates.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad097
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- Publication type:
- Article
Regularized adversarial learning for normalization of multi-batch untargeted metabolomics data.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad096
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- Article
ecmtool: fast and memory-efficient enumeration of elementary conversion modes.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad095
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- Publication type:
- Article
PFresGO: an attention mechanism-based deep-learning approach for protein annotation by integrating gene ontology inter-relationships.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad094
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- Publication type:
- Article
VirBot: an RNA viral contig detector for metagenomic data.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad093
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- Article
BioPlexR and BioPlexPy: integrated data products for the analysis of human protein interactions.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad091
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- Publication type:
- Article
Using graph neural networks for site-of-metabolism prediction and its applications to ranking promiscuous enzymatic products.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad089
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- Article
Generalizations of the genomic rank distance to indels.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad087
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- Publication type:
- Article
ARAX: a graph-based modular reasoning tool for translational biomedicine.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad082
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- Publication type:
- Article
Improving annotation propagation on molecular networks through random walks: introducing ChemWalker.
- Published in:
- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad078
- By:
- Publication type:
- Article
GEOfetch: a command-line tool for downloading data and standardized metadata from GEO and SRA.
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- Bioinformatics, 2023, v. 39, n. 3, p. 1, doi. 10.1093/bioinformatics/btad069
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- Publication type:
- Article