Results: 32
ChromDMM: a Dirichlet-multinomial mixture model for clustering heterogeneous epigenetic data.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3863, doi. 10.1093/bioinformatics/btac444
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- Publication type:
- Article
Random field modeling of multi-trait multi-locus association for detecting methylation quantitative trait loci.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3853, doi. 10.1093/bioinformatics/btac443
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- Publication type:
- Article
HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4030, doi. 10.1093/bioinformatics/btac442
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- Publication type:
- Article
MobilityTransformR: an R package for effective mobility transformation of CE-MS data.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4044, doi. 10.1093/bioinformatics/btac441
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- Publication type:
- Article
Topological analysis as a tool for detection of abnormalities in protein–protein interaction data.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3968, doi. 10.1093/bioinformatics/btac440
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- Publication type:
- Article
Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4051, doi. 10.1093/bioinformatics/btac439
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- Publication type:
- Article
microbiomeMarker: an R/Bioconductor package for microbiome marker identification and visualization.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4027, doi. 10.1093/bioinformatics/btac438
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- Publication type:
- Article
HSMotifDiscover: identification of motifs in sequences composed of non-single-letter elements.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4036, doi. 10.1093/bioinformatics/btac437
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- Publication type:
- Article
InterpolatedXY: a two-step strategy to normalize DNA methylation microarray data avoiding sex bias.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3950, doi. 10.1093/bioinformatics/btac436
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- Publication type:
- Article
MSRCall: a multi-scale deep neural network to basecall Oxford Nanopore sequences.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3877, doi. 10.1093/bioinformatics/btac435
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- Publication type:
- Article
i6mA-Caps: a CapsuleNet-based framework for identifying DNA N6-methyladenine sites.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3885, doi. 10.1093/bioinformatics/btac434
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- Publication type:
- Article
Mirage 2.0: fast and memory-efficient reconstruction of gene-content evolution considering heterogeneous evolutionary patterns among gene families.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4039, doi. 10.1093/bioinformatics/btac433
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- Publication type:
- Article
PScL-DDCFPred: an ensemble deep learning-based approach for characterizing multiclass subcellular localization of human proteins from bioimage data.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4019, doi. 10.1093/bioinformatics/btac432
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- Publication type:
- Article
Outlier detection for multi-network data.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4011, doi. 10.1093/bioinformatics/btac431
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- Publication type:
- Article
ProtNAff: protein-bound Nucleic Acid filters and fragment libraries.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3911, doi. 10.1093/bioinformatics/btac430
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- Publication type:
- Article
RAPPPID: towards generalizable protein interaction prediction with AWD-LSTM twin networks.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3958, doi. 10.1093/bioinformatics/btac429
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- Publication type:
- Article
unifying network modeling approach for codon optimization.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3935, doi. 10.1093/bioinformatics/btac428
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- Publication type:
- Article
ResPAN: a powerful batch correction model for scRNA-seq data through residual adversarial networks.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3942, doi. 10.1093/bioinformatics/btac427
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- Publication type:
- Article
Vfold-Pipeline: a web server for RNA 3D structure prediction from sequences.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4042, doi. 10.1093/bioinformatics/btac426
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- Publication type:
- Article
mapDATAge: a ShinyR package to chart ancient DNA data through space and time.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3992, doi. 10.1093/bioinformatics/btac425
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- Publication type:
- Article
gofasta: command-line utilities for genomic epidemiology research.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4033, doi. 10.1093/bioinformatics/btac424
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- Publication type:
- Article
Single-cell generalized trend model (scGTM): a flexible and interpretable model of gene expression trend along cell pseudotime.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3927, doi. 10.1093/bioinformatics/btac423
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- Publication type:
- Article
Improving biomedical named entity recognition by dynamic caching inter-sentence information.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3976, doi. 10.1093/bioinformatics/btac422
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- Publication type:
- Article
Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred secondary structure and evolutionary-derived mutational coupling.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3900, doi. 10.1093/bioinformatics/btac421
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- Publication type:
- Article
Improving candidate Biosynthetic Gene Clusters in fungi through reinforcement learning.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3984, doi. 10.1093/bioinformatics/btac420
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- Publication type:
- Article
TIMSCONVERT: a workflow to convert trapped ion mobility data to open data formats.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4046, doi. 10.1093/bioinformatics/btac419
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- Publication type:
- Article
ClearCNV: CNV calling from NGS panel data in the presence of ambiguity and noise.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3871, doi. 10.1093/bioinformatics/btac418
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- Publication type:
- Article
CancerCellTracker: a brightfield time-lapse microscopy framework for cancer drug sensitivity estimation.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4002, doi. 10.1093/bioinformatics/btac417
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- Publication type:
- Article
Variational Bayes for high-dimensional proportional hazards models with applications within gene expression.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3918, doi. 10.1093/bioinformatics/btac416
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- Publication type:
- Article
Deep learning models for RNA secondary structure prediction (probably) do not generalize across families.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3892, doi. 10.1093/bioinformatics/btac415
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- Publication type:
- Article
EasyGDB: a low-maintenance and highly customizable system to develop genomics portals.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 4048, doi. 10.1093/bioinformatics/btac412
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- Publication type:
- Article
Hierarchical reinforcement learning for automatic disease diagnosis.
- Published in:
- Bioinformatics, 2022, v. 38, n. 16, p. 3995, doi. 10.1093/bioinformatics/btac408
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- Publication type:
- Article